RNA–Protein interactions for RNA: ENST00000422544.2

PDGFC-202, Transcript of platelet derived growth factor C, humanhuman

TSL 5 BASIC

Gene PDGFC, Length 849 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-202ENST00000422544 ACBD7Q8N6N7 88 aa7.94□□□□□ -1.14
PDGFC-202ENST00000422544 YIPF7Q8N8F6 280 aa7.94□□□□□ -1.14
PDGFC-202ENST00000422544 BPIFB6Q8NFQ5 453 aa7.94□□□□□ -1.14
PDGFC-202ENST00000422544 SNX33Q8WV41 574 aa7.94□□□□□ -1.14
PDGFC-202ENST00000422544 GGHQ92820 318 aa7.94□□□□□ -1.14
PDGFC-202ENST00000422544 SGK3Q96BR1 496 aa7.94□□□□□ -1.14
PDGFC-202ENST00000422544 HAVCR1Q96D42 359 aa7.94□□□□□ -1.14
PDGFC-202ENST00000422544 MBD6Q96DN6 1003 aa7.94□□□□□ -1.14
PDGFC-202ENST00000422544 COG8Q96MW5 612 aa7.94□□□□□ -1.14
PDGFC-202ENST00000422544 RHNO1Q9BSD3 238 aa7.94□□□□□ -1.14
PDGFC-202ENST00000422544 CACNG6Q9BXT2 260 aa7.94□□□□□ -1.14
PDGFC-202ENST00000422544 ANKRD60Q9BZ19 345 aa7.94□□□□□ -1.14
PDGFC-202ENST00000422544 CXorf56Q9H5V9 222 aa7.94□□□□□ -1.14
PDGFC-202ENST00000422544 NIPAL2Q9H841 368 aa7.94□□□□□ -1.14
PDGFC-202ENST00000422544 TUBG2Q9NRH3 451 aa7.94□□□□□ -1.14
PDGFC-202ENST00000422544 BEX4Q9NWD9 120 aaPredicted RBP7.94□□□□□ -1.14
PDGFC-202ENST00000422544 ZNF319Q9P2F9 582 aa7.94□□□□□ -1.14
PDGFC-202ENST00000422544 PMF1-BGLAPU3KQ54 211 aa7.94□□□□□ -1.14
PDGFC-202ENST00000422544 STAB1Q9NY15 2570 aa7.94□□□□□ -1.14
PDGFC-202ENST00000422544 TMEM269A0A1B0GVZ9 245 aa7.93□□□□□ -1.14
PDGFC-202ENST00000422544 XPNPEP2O43895 674 aa7.93□□□□□ -1.14
PDGFC-202ENST00000422544 FAM20BO75063 409 aa7.93□□□□□ -1.14
PDGFC-202ENST00000422544 NDUFS7O75251 213 aa7.93□□□□□ -1.14
PDGFC-202ENST00000422544 SULT1C4O75897 302 aa7.93□□□□□ -1.14
PDGFC-202ENST00000422544 RPP14O95059 124 aaKnown RBP7.93□□□□□ -1.14
PDGFC-202ENST00000422544 PNPP00491 289 aa7.93□□□□□ -1.14
PDGFC-202ENST00000422544 IGHV3-13P01766 116 aa7.93□□□□□ -1.14
PDGFC-202ENST00000422544 KRT8P05787 483 aa7.93□□□□□ -1.14
PDGFC-202ENST00000422544 ADRA2AP08913 450 aa7.93□□□□□ -1.14
PDGFC-202ENST00000422544 NAT2P11245 290 aa7.93□□□□□ -1.14
PDGFC-202ENST00000422544 RAC2P15153 192 aa7.93□□□□□ -1.14
PDGFC-202ENST00000422544 DCTDP32321 178 aa7.93□□□□□ -1.14
PDGFC-202ENST00000422544 OR12D2P58182 307 aa7.93□□□□□ -1.14
PDGFC-202ENST00000422544 PSMA6P60900 246 aaKnown RBP7.93□□□□□ -1.14
PDGFC-202ENST00000422544 ACTC1P68032 377 aa7.93□□□□□ -1.14
PDGFC-202ENST00000422544 ACTA1P68133 377 aa7.93□□□□□ -1.14
PDGFC-202ENST00000422544 ZNF92Q03936 586 aa7.93□□□□□ -1.14
PDGFC-202ENST00000422544 GK2Q14410 553 aaPredicted RBP7.93□□□□□ -1.14
PDGFC-202ENST00000422544 NKPD1Q17RQ9 610 aa7.93□□□□□ -1.14
PDGFC-202ENST00000422544 TP53I3Q53FA7 332 aa7.93□□□□□ -1.14
PDGFC-202ENST00000422544 C6orf141Q5SZD1 244 aa7.93□□□□□ -1.14
PDGFC-202ENST00000422544 ZNF684Q5T5D7 378 aa7.93□□□□□ -1.14
PDGFC-202ENST00000422544 LIPNQ5VXI9 398 aa7.93□□□□□ -1.14
PDGFC-202ENST00000422544 OR2T2Q6IF00 324 aa7.93□□□□□ -1.14
PDGFC-202ENST00000422544 FBXW12Q6X9E4 464 aa7.93□□□□□ -1.14
PDGFC-202ENST00000422544 SPNS3Q6ZMD2 512 aa7.93□□□□□ -1.14
PDGFC-202ENST00000422544 OR52H1Q8NGJ2 320 aa7.93□□□□□ -1.14
PDGFC-202ENST00000422544 OR2AE1Q8NHA4 323 aa7.93□□□□□ -1.14
PDGFC-202ENST00000422544 GTF3AQ92664 365 aaKnown RBP7.93□□□□□ -1.14
PDGFC-202ENST00000422544 PPP1R14AQ96A00 147 aa7.93□□□□□ -1.14
PDGFC-202ENST00000422544 PERPQ96FX8 193 aa7.93□□□□□ -1.14
PDGFC-202ENST00000422544 PGAM5Q96HS1 289 aa7.93□□□□□ -1.14
PDGFC-202ENST00000422544 CNBD2Q96M20 576 aa7.93□□□□□ -1.14
PDGFC-202ENST00000422544 ZNF184Q99676 751 aaPredicted RBP7.93□□□□□ -1.14
PDGFC-202ENST00000422544 VRK1Q99986 396 aaPredicted RBP7.93□□□□□ -1.14
PDGFC-202ENST00000422544 OR10A2Q9H208 303 aa7.93□□□□□ -1.14
PDGFC-202ENST00000422544 SP140LQ9H930 580 aa7.93□□□□□ -1.14
PDGFC-202ENST00000422544 FGF20Q9NP95 211 aaPredicted RBP7.93□□□□□ -1.14
PDGFC-202ENST00000422544 DYNLRB1Q9NP97 96 aa7.93□□□□□ -1.14
PDGFC-202ENST00000422544 ZNF701Q9NV72 531 aaPredicted RBP7.93□□□□□ -1.14
PDGFC-202ENST00000422544 FAM206AQ9NX38 181 aa7.93□□□□□ -1.14
PDGFC-202ENST00000422544 ERVK13-1Q9NX77 482 aa7.93□□□□□ -1.14
PDGFC-202ENST00000422544 PURGQ9UJV8 347 aaKnown RBP7.93□□□□□ -1.14
PDGFC-202ENST00000422544 GNG8Q9UK08 70 aa7.93□□□□□ -1.14
PDGFC-202ENST00000422544 ITGB1BP2Q9UKP3 347 aa7.93□□□□□ -1.14
PDGFC-202ENST00000422544 RAB26Q9ULW5 256 aa7.93□□□□□ -1.14
PDGFC-202ENST00000422544 PCDHGB5Q9Y5G0 923 aa7.93□□□□□ -1.14
PDGFC-202ENST00000422544 DSCAMO60469 2012 aa7.93□□□□□ -1.14
PDGFC-202ENST00000422544 NBEAL1Q6ZS30 2694 aa7.93□□□□□ -1.14
PDGFC-202ENST00000422544 CUBNO60494 3623 aa7.92□□□□□ -1.14
PDGFC-202ENST00000422544 IRGMA1A4Y4 181 aa7.92□□□□□ -1.14
PDGFC-202ENST00000422544 H3BSA7 217 aa7.92□□□□□ -1.14
PDGFC-202ENST00000422544 J3QLW9 94 aa7.92□□□□□ -1.14
PDGFC-202ENST00000422544 M0R233 179 aa7.92□□□□□ -1.14
PDGFC-202ENST00000422544 TIMM8AO60220 97 aaPredicted RBP7.92□□□□□ -1.14
PDGFC-202ENST00000422544 SRSF10O75494 262 aaKnown RBP7.92□□□□□ -1.14
PDGFC-202ENST00000422544 IGHA1P01876 353 aa7.92□□□□□ -1.14
PDGFC-202ENST00000422544 ZNF19P17023 458 aa7.92□□□□□ -1.14
PDGFC-202ENST00000422544 KITLGP21583 273 aa7.92□□□□□ -1.14
PDGFC-202ENST00000422544 DCKP27707 260 aa7.92□□□□□ -1.14
PDGFC-202ENST00000422544 PSMB10P40306 273 aa7.92□□□□□ -1.14
PDGFC-202ENST00000422544 PTH2RP49190 550 aa7.92□□□□□ -1.14
PDGFC-202ENST00000422544 MMP15P51511 669 aa7.92□□□□□ -1.14
PDGFC-202ENST00000422544 MMP16P51512 607 aa7.92□□□□□ -1.14
PDGFC-202ENST00000422544 ATP5J2P56134 94 aa7.92□□□□□ -1.14
PDGFC-202ENST00000422544 MVKQ03426 396 aa7.92□□□□□ -1.14
PDGFC-202ENST00000422544 MFGE8Q08431 387 aaPredicted RBP7.92□□□□□ -1.14
PDGFC-202ENST00000422544 GALEQ14376 348 aa7.92□□□□□ -1.14
PDGFC-202ENST00000422544 MOGQ16653 247 aa7.92□□□□□ -1.14
PDGFC-202ENST00000422544 TIGD6Q17RP2 521 aa7.92□□□□□ -1.14
PDGFC-202ENST00000422544 GFOD2Q3B7J2 385 aa7.92□□□□□ -1.14
PDGFC-202ENST00000422544 ZNF829Q3KNS6 432 aaPredicted RBP7.92□□□□□ -1.14
PDGFC-202ENST00000422544 CDONQ4KMG0 1287 aa7.92□□□□□ -1.14
PDGFC-202ENST00000422544 PGAP1Q75T13 922 aa7.92□□□□□ -1.14
PDGFC-202ENST00000422544 MRPL21Q7Z2W9 205 aaKnown RBP7.92□□□□□ -1.14
PDGFC-202ENST00000422544 OR5AS1Q8N127 324 aa7.92□□□□□ -1.14
PDGFC-202ENST00000422544 OR8B12Q8NGG6 310 aa7.92□□□□□ -1.14
PDGFC-202ENST00000422544 RORBQ92753 470 aa7.92□□□□□ -1.14
PDGFC-202ENST00000422544 TRMT61AQ96FX7 289 aaKnown RBP7.92□□□□□ -1.14
PDGFC-202ENST00000422544 TMEM80Q96HE8 168 aa7.92□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms