RNA–Protein interactions for RNA: ENST00000422392.6

CDH1-202, Transcript of cadherin 1, humanhuman

TSL 1 (best) BASIC

Gene CDH1, Length 2,567 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-202ENST00000422392 EIF4E3Q8N5X7 224 aaKnown RBP14.02□□□□□ -0.16
CDH1-202ENST00000422392 MITD1Q8WV92 249 aa14.02□□□□□ -0.16
CDH1-202ENST00000422392 FOXRED1Q96CU9 486 aaPredicted RBP14.02□□□□□ -0.16
CDH1-202ENST00000422392 BANF2Q9H503 90 aa14.02□□□□□ -0.16
CDH1-202ENST00000422392 ZC4H2Q9NQZ6 224 aa14.02□□□□□ -0.16
CDH1-202ENST00000422392 SLC2A8Q9NY64 477 aa14.02□□□□□ -0.16
CDH1-202ENST00000422392 KLRF1Q9NZS2 232 aa14.02□□□□□ -0.16
CDH1-202ENST00000422392 SDK2Q58EX2 2172 aa14.02□□□□□ -0.17
CDH1-202ENST00000422392 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa14.02□□□□□ -0.17
CDH1-202ENST00000422392 A0A1W2PNR3 127 aa14.02□□□□□ -0.17
CDH1-202ENST00000422392 LIPT2A6NK58 231 aa14.02□□□□□ -0.17
CDH1-202ENST00000422392 PLATP00750 562 aa14.02□□□□□ -0.17
CDH1-202ENST00000422392 ZNF93P35789 620 aaPredicted RBP14.02□□□□□ -0.17
CDH1-202ENST00000422392 NXPH1P58417 271 aa14.02□□□□□ -0.17
CDH1-202ENST00000422392 PHF19Q5T6S3 580 aa14.02□□□□□ -0.17
CDH1-202ENST00000422392 RAB12Q6IQ22 244 aa14.02□□□□□ -0.17
CDH1-202ENST00000422392 DEGS2Q6QHC5 323 aa14.02□□□□□ -0.17
CDH1-202ENST00000422392 C5orf46Q6UWT4 87 aa14.02□□□□□ -0.17
CDH1-202ENST00000422392 MOB3CQ70IA8 216 aa14.02□□□□□ -0.17
CDH1-202ENST00000422392 ST8SIA1Q92185 356 aa14.02□□□□□ -0.17
CDH1-202ENST00000422392 PHB2Q99623 299 aa14.02□□□□□ -0.17
CDH1-202ENST00000422392 ZNF319Q9P2F9 582 aa14.02□□□□□ -0.17
CDH1-202ENST00000422392 POLR1DQ9Y2S0 133 aa14.02□□□□□ -0.17
CDH1-202ENST00000422392 LHFPL6Q9Y693 200 aa14.02□□□□□ -0.17
CDH1-202ENST00000422392 WDFY4Q6ZS81 3184 aa14.02□□□□□ -0.17
CDH1-202ENST00000422392 TMEM200CA6NKL6 621 aa14.01□□□□□ -0.17
CDH1-202ENST00000422392 VSTM2BA6NLU5 285 aa14.01□□□□□ -0.17
CDH1-202ENST00000422392 EFSO43281 561 aa14.01□□□□□ -0.17
CDH1-202ENST00000422392 OR2F2O95006 317 aa14.01□□□□□ -0.17
CDH1-202ENST00000422392 PI3P19957 117 aa14.01□□□□□ -0.17
CDH1-202ENST00000422392 RAB3AP20336 220 aa14.01□□□□□ -0.17
CDH1-202ENST00000422392 CASRP41180 1078 aa14.01□□□□□ -0.17
CDH1-202ENST00000422392 APOBEC1P41238 236 aaKnown RBP14.01□□□□□ -0.17
CDH1-202ENST00000422392 MYBPHQ13203 477 aa14.01□□□□□ -0.17
CDH1-202ENST00000422392 OR2F1Q13607 317 aa14.01□□□□□ -0.17
CDH1-202ENST00000422392 LPCAT3Q6P1A2 487 aa14.01□□□□□ -0.17
CDH1-202ENST00000422392 ACOT7LQ6ZUV0 252 aa14.01□□□□□ -0.17
CDH1-202ENST00000422392 TMPRSS9Q7Z410 1059 aa14.01□□□□□ -0.17
CDH1-202ENST00000422392 TMEM185AQ8NFB2 350 aa14.01□□□□□ -0.17
CDH1-202ENST00000422392 BPIFCQ8NFQ6 507 aa14.01□□□□□ -0.17
CDH1-202ENST00000422392 ROBO4Q8WZ75 1007 aa14.01□□□□□ -0.17
CDH1-202ENST00000422392 DDIT4LQ96D03 193 aa14.01□□□□□ -0.17
CDH1-202ENST00000422392 LRRC46Q96FV0 321 aa14.01□□□□□ -0.17
CDH1-202ENST00000422392 ZNF107Q9UII5 783 aaPredicted RBP14.01□□□□□ -0.17
CDH1-202ENST00000422392 ARPC4-TTLL3A0A0A6YYG9 625 aa14.01□□□□□ -0.17
CDH1-202ENST00000422392 C5orf51A6NDU8 294 aa14.01□□□□□ -0.17
CDH1-202ENST00000422392 ZNF814B7Z6K7 855 aa14.01□□□□□ -0.17
CDH1-202ENST00000422392 F5H0A9 414 aaPredicted RBP14.01□□□□□ -0.17
CDH1-202ENST00000422392 SULT2B1O00204 365 aa14.01□□□□□ -0.17
CDH1-202ENST00000422392 SOCS1O15524 211 aa14.01□□□□□ -0.17
CDH1-202ENST00000422392 TIAF1O95411 115 aa14.01□□□□□ -0.17
CDH1-202ENST00000422392 MPIG6BO95866 241 aa14.01□□□□□ -0.17
CDH1-202ENST00000422392 IFNA6P05013 189 aa14.01□□□□□ -0.17
CDH1-202ENST00000422392 SLC25A4P12235 298 aa14.01□□□□□ -0.17
CDH1-202ENST00000422392 FOSL2P15408 326 aa14.01□□□□□ -0.17
CDH1-202ENST00000422392 CTRB1P17538 263 aa14.01□□□□□ -0.17
CDH1-202ENST00000422392 KLK2P20151 261 aa14.01□□□□□ -0.17
CDH1-202ENST00000422392 OR3A4PP47883 348 aa14.01□□□□□ -0.17
CDH1-202ENST00000422392 EMP2P54851 167 aa14.01□□□□□ -0.17
CDH1-202ENST00000422392 SRSF4Q08170 494 aaKnown RBP14.01□□□□□ -0.17
CDH1-202ENST00000422392 ZNF345Q14585 488 aa14.01□□□□□ -0.17
CDH1-202ENST00000422392 FAM69BQ5VUD6 431 aa14.01□□□□□ -0.17
CDH1-202ENST00000422392 CTRB2Q6GPI1 263 aa14.01□□□□□ -0.17
CDH1-202ENST00000422392 ABHD12BQ7Z5M8 362 aaPredicted RBP14.01□□□□□ -0.17
CDH1-202ENST00000422392 OR5D14Q8NGL3 314 aa14.01□□□□□ -0.17
CDH1-202ENST00000422392 OR10R2Q8NGX6 335 aa14.01□□□□□ -0.17
CDH1-202ENST00000422392 FAM71F1Q96KD3 344 aaPredicted RBP14.01□□□□□ -0.17
CDH1-202ENST00000422392 TRBV11-1A0A0K0K1C0 115 aa14□□□□□ -0.17
CDH1-202ENST00000422392 BPNT1O95861 308 aa14□□□□□ -0.17
CDH1-202ENST00000422392 IL2RAP01589 272 aa14□□□□□ -0.17
CDH1-202ENST00000422392 CNR1P21554 472 aa14□□□□□ -0.17
CDH1-202ENST00000422392 GLIPR1L1Q6UWM5 242 aa14□□□□□ -0.17
CDH1-202ENST00000422392 SLC25A45Q8N413 288 aa14□□□□□ -0.17
CDH1-202ENST00000422392 PLPP5Q8NEB5 264 aa14□□□□□ -0.17
CDH1-202ENST00000422392 TMEM41AQ96HV5 264 aa14□□□□□ -0.17
CDH1-202ENST00000422392 FAM74A7A6NL05 159 aa14□□□□□ -0.17
CDH1-202ENST00000422392 TOR1AO14656 332 aa14□□□□□ -0.17
CDH1-202ENST00000422392 RAMP1O60894 148 aa14□□□□□ -0.17
CDH1-202ENST00000422392 PGAM2P15259 253 aa14□□□□□ -0.17
CDH1-202ENST00000422392 PPIAP62937 165 aaKnown RBP14□□□□□ -0.17
CDH1-202ENST00000422392 MC2RQ01718 297 aa14□□□□□ -0.17
CDH1-202ENST00000422392 SNTB1Q13884 538 aaKnown RBP14□□□□□ -0.17
CDH1-202ENST00000422392 FAM74A3Q4VXF1 159 aa14□□□□□ -0.17
CDH1-202ENST00000422392 PLAC9Q5JTB6 97 aa14□□□□□ -0.17
CDH1-202ENST00000422392 ANKRD37Q7Z713 158 aa14□□□□□ -0.17
CDH1-202ENST00000422392 OR1S2Q8NGQ3 325 aa14□□□□□ -0.17
CDH1-202ENST00000422392 OR4K15Q8NH41 348 aa14□□□□□ -0.17
CDH1-202ENST00000422392 THAP6Q8TBB0 222 aa14□□□□□ -0.17
CDH1-202ENST00000422392 LPAR5Q9H1C0 372 aa14□□□□□ -0.17
CDH1-202ENST00000422392 GAREM1Q9H706 876 aa14□□□□□ -0.17
CDH1-202ENST00000422392 RER1O15258 196 aa13.99□□□□□ -0.17
CDH1-202ENST00000422392 ICAM2P13598 275 aa13.99□□□□□ -0.17
CDH1-202ENST00000422392 GLULP15104 373 aa13.99□□□□□ -0.17
CDH1-202ENST00000422392 ZNF20P17024 532 aa13.99□□□□□ -0.17
CDH1-202ENST00000422392 LAP3P28838 519 aa13.99□□□□□ -0.17
CDH1-202ENST00000422392 SERPINF1P36955 418 aa13.99□□□□□ -0.17
CDH1-202ENST00000422392 CLRN1P58418 232 aa13.99□□□□□ -0.17
CDH1-202ENST00000422392 MICBQ29980 383 aa13.99□□□□□ -0.17
CDH1-202ENST00000422392 MISPQ8IVT2 679 aa13.99□□□□□ -0.17
CDH1-202ENST00000422392 ZDHHC22Q8N966 263 aa13.99□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms