RNA–Protein interactions for RNA: ENST00000421999.7

CMSS1-201, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CMSS1, Length 4,330 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-201ENST00000421999 TRAPPC4Q9Y296 219 aa8.68□□□□□ -1.02
CMSS1-201ENST00000421999 FANCMQ8IYD8 2048 aa8.68□□□□□ -1.02
CMSS1-201ENST00000421999 COL4A3Q01955 1670 aa8.67□□□□□ -1.02
CMSS1-201ENST00000421999 PLPP3O14495 311 aa8.67□□□□□ -1.02
CMSS1-201ENST00000421999 TO15178 435 aa8.67□□□□□ -1.02
CMSS1-201ENST00000421999 SRMP19623 302 aa8.67□□□□□ -1.02
CMSS1-201ENST00000421999 SELENOPP49908 381 aa8.67□□□□□ -1.02
CMSS1-201ENST00000421999 SPCS2Q15005 226 aa8.67□□□□□ -1.02
CMSS1-201ENST00000421999 ESCO2Q56NI9 601 aa8.67□□□□□ -1.02
CMSS1-201ENST00000421999 CCDC71Q8IV32 467 aaPredicted RBP8.67□□□□□ -1.02
CMSS1-201ENST00000421999 NANOGP1Q8N7R0 232 aa8.67□□□□□ -1.02
CMSS1-201ENST00000421999 RAB40AQ8WXH6 277 aa8.67□□□□□ -1.02
CMSS1-201ENST00000421999 OR2S2Q9NQN1 319 aa8.67□□□□□ -1.02
CMSS1-201ENST00000421999 TMEM100Q9NV29 134 aa8.67□□□□□ -1.02
CMSS1-201ENST00000421999 FKBP14Q9NWM8 211 aa8.67□□□□□ -1.02
CMSS1-201ENST00000421999 ICAM5Q9UMF0 924 aa8.67□□□□□ -1.02
CMSS1-201ENST00000421999 GMEB1Q9Y692 573 aa8.67□□□□□ -1.02
CMSS1-201ENST00000421999 A0A0J9YW62 118 aa8.67□□□□□ -1.02
CMSS1-201ENST00000421999 KANTRA0A1W2PQU2 76 aa8.67□□□□□ -1.02
CMSS1-201ENST00000421999 TMEM129A0AVI4 362 aa8.67□□□□□ -1.02
CMSS1-201ENST00000421999 OR6C68A6NDL8 312 aa8.67□□□□□ -1.02
CMSS1-201ENST00000421999 ZSCAN5BA6NJL1 495 aa8.67□□□□□ -1.02
CMSS1-201ENST00000421999 LIPT2A6NK58 231 aa8.67□□□□□ -1.02
CMSS1-201ENST00000421999 ZIC2O95409 532 aaPredicted RBP8.67□□□□□ -1.02
CMSS1-201ENST00000421999 APEHP13798 732 aaKnown RBP8.67□□□□□ -1.02
CMSS1-201ENST00000421999 TNFRSF1AP19438 455 aa8.67□□□□□ -1.02
CMSS1-201ENST00000421999 PCSK6P29122 969 aa8.67□□□□□ -1.02
CMSS1-201ENST00000421999 SYT6Q5T7P8 510 aaPredicted RBP8.67□□□□□ -1.02
CMSS1-201ENST00000421999 SFXN4Q6P4A7 337 aa8.67□□□□□ -1.02
CMSS1-201ENST00000421999 ZNF573Q86YE8 665 aa8.67□□□□□ -1.02
CMSS1-201ENST00000421999 SECTM1Q8WVN6 248 aa8.67□□□□□ -1.02
CMSS1-201ENST00000421999 ASB5Q8WWX0 329 aa8.67□□□□□ -1.02
CMSS1-201ENST00000421999 OIT3Q8WWZ8 545 aa8.67□□□□□ -1.02
CMSS1-201ENST00000421999 ACKR4Q9NPB9 350 aa8.67□□□□□ -1.02
CMSS1-201ENST00000421999 SLC33A1O00400 549 aaPredicted RBP8.67□□□□□ -1.02
CMSS1-201ENST00000421999 CREBL2O60519 120 aaPredicted RBP8.67□□□□□ -1.02
CMSS1-201ENST00000421999 PRSS12P56730 875 aa8.67□□□□□ -1.02
CMSS1-201ENST00000421999 ZNF468Q5VIY5 522 aaPredicted RBP8.67□□□□□ -1.02
CMSS1-201ENST00000421999 CD300LDQ6UXZ3 194 aa8.67□□□□□ -1.02
CMSS1-201ENST00000421999 ZDHHC23Q8IYP9 409 aa8.67□□□□□ -1.02
CMSS1-201ENST00000421999 OR2G2Q8NGZ5 317 aa8.67□□□□□ -1.02
CMSS1-201ENST00000421999 ZNF416Q9BWM5 594 aa8.67□□□□□ -1.02
CMSS1-201ENST00000421999 SLC26A1Q9H2B4 701 aa8.67□□□□□ -1.02
CMSS1-201ENST00000421999 GLRX2Q9NS18 164 aa8.67□□□□□ -1.02
CMSS1-201ENST00000421999 SCN8AQ9UQD0 1980 aa8.67□□□□□ -1.02
CMSS1-201ENST00000421999 OTOGLQ3ZCN5 2332 aa8.67□□□□□ -1.02
CMSS1-201ENST00000421999 A0A1W2PPH5 198 aa8.66□□□□□ -1.02
CMSS1-201ENST00000421999 HSPB2A8KAH6 182 aa8.66□□□□□ -1.02
CMSS1-201ENST00000421999 SPINT2O43291 252 aa8.66□□□□□ -1.02
CMSS1-201ENST00000421999 CDKN2AP42771 156 aaKnown RBP8.66□□□□□ -1.02
CMSS1-201ENST00000421999 HSPB2Q16082 182 aa8.66□□□□□ -1.02
CMSS1-201ENST00000421999 TAF9Q16594 264 aa8.66□□□□□ -1.02
CMSS1-201ENST00000421999 KRTCAP3Q53RY4 240 aa8.66□□□□□ -1.02
CMSS1-201ENST00000421999 CCL17Q92583 94 aa8.66□□□□□ -1.02
CMSS1-201ENST00000421999 ABHD17AQ96GS6 310 aa8.66□□□□□ -1.02
CMSS1-201ENST00000421999 PRSS27Q9BQR3 290 aa8.66□□□□□ -1.02
CMSS1-201ENST00000421999 OCSTAMPQ9BR26 566 aa8.66□□□□□ -1.02
CMSS1-201ENST00000421999 NEUROG3Q9Y4Z2 214 aa8.66□□□□□ -1.02
CMSS1-201ENST00000421999 R4GMQ9 66 aa8.66□□□□□ -1.02
CMSS1-201ENST00000421999 DSPPQ9NZW4 1301 aa8.66□□□□□ -1.02
CMSS1-201ENST00000421999 MEIKINA0A087WXM9 373 aa8.66□□□□□ -1.02
CMSS1-201ENST00000421999 SLC22A23A1A5C7 686 aa8.66□□□□□ -1.02
CMSS1-201ENST00000421999 C16orf97H3BN30 126 aa8.66□□□□□ -1.02
CMSS1-201ENST00000421999 FADS1O60427 444 aa8.66□□□□□ -1.02
CMSS1-201ENST00000421999 BPNT1O95861 308 aa8.66□□□□□ -1.02
CMSS1-201ENST00000421999 UMODP07911 640 aa8.66□□□□□ -1.02
CMSS1-201ENST00000421999 ALDH3B2P48448 385 aa8.66□□□□□ -1.02
CMSS1-201ENST00000421999 EGR3Q06889 387 aa8.66□□□□□ -1.02
CMSS1-201ENST00000421999 ETFDHQ16134 617 aa8.66□□□□□ -1.02
CMSS1-201ENST00000421999 RTL6Q6ICC9 239 aa8.66□□□□□ -1.02
CMSS1-201ENST00000421999 LRRC28Q86X40 367 aaPredicted RBP8.66□□□□□ -1.02
CMSS1-201ENST00000421999 GDPD1Q8N9F7 314 aa8.66□□□□□ -1.02
CMSS1-201ENST00000421999 OR1M1Q8NGA1 313 aa8.66□□□□□ -1.02
CMSS1-201ENST00000421999 OR13C5Q8NGS8 318 aa8.66□□□□□ -1.02
CMSS1-201ENST00000421999 OR2AE1Q8NHA4 323 aa8.66□□□□□ -1.02
CMSS1-201ENST00000421999 BCL7BQ9BQE9 202 aa8.66□□□□□ -1.02
CMSS1-201ENST00000421999 ZCCHC4Q9H5U6 513 aa8.66□□□□□ -1.02
CMSS1-201ENST00000421999 LIN7BQ9HAP6 207 aa8.66□□□□□ -1.02
CMSS1-201ENST00000421999 BCO1Q9HAY6 547 aa8.66□□□□□ -1.02
CMSS1-201ENST00000421999 C12orf10Q9HB07 376 aa8.66□□□□□ -1.02
CMSS1-201ENST00000421999 USF3Q68DE3 2245 aa8.66□□□□□ -1.02
CMSS1-201ENST00000421999 IGLV3-12A0A075B6K2 115 aa8.66□□□□□ -1.02
CMSS1-201ENST00000421999 SIRPB1O00241 398 aa8.66□□□□□ -1.02
CMSS1-201ENST00000421999 ABCD4O14678 606 aa8.66□□□□□ -1.02
CMSS1-201ENST00000421999 WDR1O75083 606 aa8.66□□□□□ -1.02
CMSS1-201ENST00000421999 SNAPC5O75971 98 aa8.66□□□□□ -1.02
CMSS1-201ENST00000421999 CLEC2LP0C7M8 214 aa8.66□□□□□ -1.02
CMSS1-201ENST00000421999 MAB21L1Q13394 359 aa8.66□□□□□ -1.02
CMSS1-201ENST00000421999 ZMYND11Q15326 602 aa8.66□□□□□ -1.02
CMSS1-201ENST00000421999 FAM185AQ8N0U4 392 aa8.66□□□□□ -1.02
CMSS1-201ENST00000421999 OTOSQ8NHW6 89 aa8.66□□□□□ -1.02
CMSS1-201ENST00000421999 TSPAN32Q96QS1 320 aa8.66□□□□□ -1.02
CMSS1-201ENST00000421999 KCNJ15Q99712 375 aa8.66□□□□□ -1.02
CMSS1-201ENST00000421999 THAP7Q9BT49 309 aaPredicted RBP8.66□□□□□ -1.02
CMSS1-201ENST00000421999 PPA2Q9H2U2 334 aa8.66□□□□□ -1.02
CMSS1-201ENST00000421999 PARD6AQ9NPB6 346 aa8.66□□□□□ -1.02
CMSS1-201ENST00000421999 TMA7Q9Y2S6 64 aaKnown RBP8.66□□□□□ -1.02
CMSS1-201ENST00000421999 RALGAPA1Q6GYQ0 2036 aa8.66□□□□□ -1.02
CMSS1-201ENST00000421999 PLXNA2O75051 1894 aa8.66□□□□□ -1.02
CMSS1-201ENST00000421999 WNK2Q9Y3S1 2297 aa8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms