RNA–Protein interactions for RNA: ENST00000421459.2

VIM-202, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 753 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-202ENST00000421459 HIST1H1CP16403 213 aaKnown RBP6.69□□□□□ -1.34
VIM-202ENST00000421459 MDH1P40925 334 aaKnown RBP6.69□□□□□ -1.34
VIM-202ENST00000421459 CD200P41217 278 aa6.69□□□□□ -1.34
VIM-202ENST00000421459 PROK1P58294 105 aa6.69□□□□□ -1.34
VIM-202ENST00000421459 ZNF92Q03936 586 aa6.69□□□□□ -1.34
VIM-202ENST00000421459 COX10Q12887 443 aa6.69□□□□□ -1.34
VIM-202ENST00000421459 TRAP1Q12931 704 aaKnown RBP6.69□□□□□ -1.34
VIM-202ENST00000421459 OR8G1Q15617 311 aa6.69□□□□□ -1.34
VIM-202ENST00000421459 TAF9Q16594 264 aa6.69□□□□□ -1.34
VIM-202ENST00000421459 OCLNQ16625 522 aa6.69□□□□□ -1.34
VIM-202ENST00000421459 SNAI3Q3KNW1 292 aa6.69□□□□□ -1.34
VIM-202ENST00000421459 COQ5Q5HYK3 327 aa6.69□□□□□ -1.34
VIM-202ENST00000421459 FGD3Q5JSP0 725 aa6.69□□□□□ -1.34
VIM-202ENST00000421459 GPR139Q6DWJ6 353 aa6.69□□□□□ -1.34
VIM-202ENST00000421459 SLC18B1Q6NT16 456 aa6.69□□□□□ -1.34
VIM-202ENST00000421459 LYPD4Q6UWN0 246 aa6.69□□□□□ -1.34
VIM-202ENST00000421459 Q6ZSV7 163 aa6.69□□□□□ -1.34
VIM-202ENST00000421459 PGAP1Q75T13 922 aa6.69□□□□□ -1.34
VIM-202ENST00000421459 BTN2A1Q7KYR7 527 aa6.69□□□□□ -1.34
VIM-202ENST00000421459 LNX2Q8N448 690 aa6.69□□□□□ -1.34
VIM-202ENST00000421459 PNKDQ8N490 385 aa6.69□□□□□ -1.34
VIM-202ENST00000421459 FAM86B1Q8N7N1 296 aa6.69□□□□□ -1.34
VIM-202ENST00000421459 SLC26A10Q8NG04 563 aa6.69□□□□□ -1.34
VIM-202ENST00000421459 OR11L1Q8NGX0 322 aa6.69□□□□□ -1.34
VIM-202ENST00000421459 OR4K13Q8NH42 304 aa6.69□□□□□ -1.34
VIM-202ENST00000421459 Q8TCH9 128 aa6.69□□□□□ -1.34
VIM-202ENST00000421459 SPRYD4Q8WW59 207 aaPredicted RBP6.69□□□□□ -1.34
VIM-202ENST00000421459 ZNRF4Q8WWF5 429 aa6.69□□□□□ -1.34
VIM-202ENST00000421459 GATAD2BQ8WXI9 593 aa6.69□□□□□ -1.34
VIM-202ENST00000421459 UBE2FQ969M7 185 aa6.69□□□□□ -1.34
VIM-202ENST00000421459 SEH1LQ96EE3 360 aa6.69□□□□□ -1.34
VIM-202ENST00000421459 FAM71F1Q96KD3 344 aaPredicted RBP6.69□□□□□ -1.34
VIM-202ENST00000421459 ERMAPQ96PL5 475 aaPredicted RBP6.69□□□□□ -1.34
VIM-202ENST00000421459 HDHD2Q9H0R4 259 aa6.69□□□□□ -1.34
VIM-202ENST00000421459 PPP1R3EQ9H7J1 279 aa6.69□□□□□ -1.34
VIM-202ENST00000421459 TCF7L1Q9HCS4 588 aa6.69□□□□□ -1.34
VIM-202ENST00000421459 PNRC2Q9NPJ4 139 aaKnown RBP6.69□□□□□ -1.34
VIM-202ENST00000421459 RPRD1BQ9NQG5 326 aaKnown RBP6.69□□□□□ -1.34
VIM-202ENST00000421459 ACOXLQ9NUZ1 547 aa6.69□□□□□ -1.34
VIM-202ENST00000421459 C1orf123Q9NWV4 160 aa6.69□□□□□ -1.34
VIM-202ENST00000421459 ERVK-18Q9QC07 812 aa6.69□□□□□ -1.34
VIM-202ENST00000421459 RNF7Q9UBF6 113 aa6.69□□□□□ -1.34
VIM-202ENST00000421459 N6AMT1Q9Y5N5 214 aa6.69□□□□□ -1.34
VIM-202ENST00000421459 ENPP4Q9Y6X5 453 aa6.69□□□□□ -1.34
VIM-202ENST00000421459 OR6C68A6NDL8 312 aa6.68□□□□□ -1.34
VIM-202ENST00000421459 CD300LBA8K4G0 201 aa6.68□□□□□ -1.34
VIM-202ENST00000421459 BBIP1A8MTZ0 92 aa6.68□□□□□ -1.34
VIM-202ENST00000421459 G3V4G9 280 aa6.68□□□□□ -1.34
VIM-202ENST00000421459 J3QW42 95 aa6.68□□□□□ -1.34
VIM-202ENST00000421459 LGALS8O00214 317 aa6.68□□□□□ -1.34
VIM-202ENST00000421459 DVL1O14640 695 aa6.68□□□□□ -1.34
VIM-202ENST00000421459 TIMM23O14925 209 aa6.68□□□□□ -1.34
VIM-202ENST00000421459 CLPXO76031 633 aa6.68□□□□□ -1.34
VIM-202ENST00000421459 FSTL3O95633 263 aa6.68□□□□□ -1.34
VIM-202ENST00000421459 H1F0P07305 194 aaKnown RBP6.68□□□□□ -1.34
VIM-202ENST00000421459 CPT2P23786 658 aa6.68□□□□□ -1.34
VIM-202ENST00000421459 GGT2P36268 569 aa6.68□□□□□ -1.34
VIM-202ENST00000421459 IER3P46695 156 aa6.68□□□□□ -1.34
VIM-202ENST00000421459 GSK3BP49841 420 aa6.68□□□□□ -1.34
VIM-202ENST00000421459 SLC7A2P52569 658 aa6.68□□□□□ -1.34
VIM-202ENST00000421459 GLYATL3Q5SZD4 288 aa6.68□□□□□ -1.34
VIM-202ENST00000421459 SLC35F1Q5T1Q4 408 aa6.68□□□□□ -1.34
VIM-202ENST00000421459 METTL11BQ5VVY1 283 aa6.68□□□□□ -1.34
VIM-202ENST00000421459 SMARCD3Q6STE5 483 aa6.68□□□□□ -1.34
VIM-202ENST00000421459 DPY19L2P2Q6ZN68 376 aa6.68□□□□□ -1.34
VIM-202ENST00000421459 MRPL21Q7Z2W9 205 aaKnown RBP6.68□□□□□ -1.34
VIM-202ENST00000421459 VMO1Q7Z5L0 202 aa6.68□□□□□ -1.34
VIM-202ENST00000421459 FAM90A1Q86YD7 464 aa6.68□□□□□ -1.34
VIM-202ENST00000421459 TMEM86BQ8N661 226 aa6.68□□□□□ -1.34
VIM-202ENST00000421459 SCCPDHQ8NBX0 429 aa6.68□□□□□ -1.34
VIM-202ENST00000421459 SDR9C7Q8NEX9 313 aa6.68□□□□□ -1.34
VIM-202ENST00000421459 TBC1D15Q8TC07 691 aa6.68□□□□□ -1.34
VIM-202ENST00000421459 SSMEM1Q8WWF3 244 aa6.68□□□□□ -1.34
VIM-202ENST00000421459 ST8SIA4Q92187 359 aa6.68□□□□□ -1.34
VIM-202ENST00000421459 DYRK2Q92630 601 aa6.68□□□□□ -1.34
VIM-202ENST00000421459 MAP6Q96JE9 813 aa6.68□□□□□ -1.34
VIM-202ENST00000421459 GPX7Q96SL4 187 aaPredicted RBP6.68□□□□□ -1.34
VIM-202ENST00000421459 CCL13Q99616 98 aa6.68□□□□□ -1.34
VIM-202ENST00000421459 ATF6BQ99941 703 aa6.68□□□□□ -1.34
VIM-202ENST00000421459 ADAT1Q9BUB4 502 aaKnown RBP6.68□□□□□ -1.34
VIM-202ENST00000421459 NSRP1Q9H0G5 558 aaKnown RBP6.68□□□□□ -1.34
VIM-202ENST00000421459 CCDC134Q9H6E4 229 aa6.68□□□□□ -1.34
VIM-202ENST00000421459 FN3KRPQ9HA64 309 aa6.68□□□□□ -1.34
VIM-202ENST00000421459 FGFR1OP2Q9NVK5 253 aa6.68□□□□□ -1.34
VIM-202ENST00000421459 MRPL22Q9NWU5 206 aaKnown RBP6.68□□□□□ -1.34
VIM-202ENST00000421459 NDUFAF4Q9P032 175 aa6.68□□□□□ -1.34
VIM-202ENST00000421459 ATPIF1Q9UII2 106 aa6.68□□□□□ -1.34
VIM-202ENST00000421459 TMEM5Q9Y2B1 443 aa6.68□□□□□ -1.34
VIM-202ENST00000421459 SIGLEC9Q9Y336 463 aa6.68□□□□□ -1.34
VIM-202ENST00000421459 POMT1Q9Y6A1 747 aa6.68□□□□□ -1.34
VIM-202ENST00000421459 NOTCH1P46531 2555 aa6.67□□□□□ -1.34
VIM-202ENST00000421459 ZNF816-ZNF321PA0A0X1KG74 233 aa6.67□□□□□ -1.34
VIM-202ENST00000421459 A0A1W2PRQ8 180 aa6.67□□□□□ -1.34
VIM-202ENST00000421459 OOEPA6NGQ2 149 aa6.67□□□□□ -1.34
VIM-202ENST00000421459 TVP23AA6NH52 213 aa6.67□□□□□ -1.34
VIM-202ENST00000421459 SLC22A31A6NKX4 558 aa6.67□□□□□ -1.34
VIM-202ENST00000421459 HLA-DQA2P01906 255 aa6.67□□□□□ -1.34
VIM-202ENST00000421459 SLC2A1P11166 492 aa6.67□□□□□ -1.34
VIM-202ENST00000421459 PAX6P26367 422 aa6.67□□□□□ -1.34
VIM-202ENST00000421459 CRABP1P29762 137 aa6.67□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms