RNA–Protein interactions for RNA: ENST00000418336.6

PKNOX1-202, Transcript of PBX/knotted 1 homeobox 1, humanhuman

TSL 2

Gene PKNOX1, Length 459 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-202ENST00000418336 LPAR3Q9UBY5 353 aa17.37■□□□□ 0.37
PKNOX1-202ENST00000418336 NPTNQ9Y639 398 aa17.37■□□□□ 0.37
PKNOX1-202ENST00000418336 PRR32B1ATL7 298 aa17.36■□□□□ 0.37
PKNOX1-202ENST00000418336 F5H5P2 479 aa17.36■□□□□ 0.37
PKNOX1-202ENST00000418336 G3V2T6 193 aa17.36■□□□□ 0.37
PKNOX1-202ENST00000418336 M0R129 80 aa17.36■□□□□ 0.37
PKNOX1-202ENST00000418336 HLA-DPB1P04440 258 aa17.36■□□□□ 0.37
PKNOX1-202ENST00000418336 MSMBP08118 114 aa17.36■□□□□ 0.37
PKNOX1-202ENST00000418336 PAICSP22234 425 aaKnown RBP17.36■□□□□ 0.37
PKNOX1-202ENST00000418336 ACTR3P61158 418 aa17.36■□□□□ 0.37
PKNOX1-202ENST00000418336 KLHL12Q53G59 568 aa17.36■□□□□ 0.37
PKNOX1-202ENST00000418336 SPATC1Q76KD6 591 aa17.36■□□□□ 0.37
PKNOX1-202ENST00000418336 CXXC5Q7LFL8 322 aaKnown RBP17.36■□□□□ 0.37
PKNOX1-202ENST00000418336 CENPMQ9NSP4 180 aa17.36■□□□□ 0.37
PKNOX1-202ENST00000418336 TVP23BQ9NYZ1 205 aa17.36■□□□□ 0.37
PKNOX1-202ENST00000418336 E9PQ18 207 aa17.35■□□□□ 0.37
PKNOX1-202ENST00000418336 TMEM178BH3BS89 294 aa17.35■□□□□ 0.37
PKNOX1-202ENST00000418336 PTBP3O95758 552 aaKnown RBP17.35■□□□□ 0.37
PKNOX1-202ENST00000418336 SELEP16581 610 aa17.35■□□□□ 0.37
PKNOX1-202ENST00000418336 TNFRSF1AP19438 455 aa17.35■□□□□ 0.37
PKNOX1-202ENST00000418336 GATA4P43694 442 aa17.35■□□□□ 0.37
PKNOX1-202ENST00000418336 GRB2P62993 217 aaKnown RBP17.35■□□□□ 0.37
PKNOX1-202ENST00000418336 ZMYND11Q15326 602 aa17.35■□□□□ 0.37
PKNOX1-202ENST00000418336 AADACL4Q5VUY2 407 aa17.35■□□□□ 0.37
PKNOX1-202ENST00000418336 PGAP1Q75T13 922 aa17.35■□□□□ 0.37
PKNOX1-202ENST00000418336 SHFQ7M4L6 423 aa17.35■□□□□ 0.37
PKNOX1-202ENST00000418336 BCDIN3DQ7Z5W3 292 aaKnown RBP17.35■□□□□ 0.37
PKNOX1-202ENST00000418336 ZNF420Q8TAQ5 688 aaPredicted RBP17.35■□□□□ 0.37
PKNOX1-202ENST00000418336 RAB1CQ92928 201 aa17.35■□□□□ 0.37
PKNOX1-202ENST00000418336 OTULINQ96BN8 352 aa17.35■□□□□ 0.37
PKNOX1-202ENST00000418336 SHARPINQ9H0F6 387 aa17.35■□□□□ 0.37
PKNOX1-202ENST00000418336 SEMA6AQ9H2E6 1030 aa17.35■□□□□ 0.37
PKNOX1-202ENST00000418336 TMEM100Q9NV29 134 aa17.35■□□□□ 0.37
PKNOX1-202ENST00000418336 ARHGAP32A7KAX9 2087 aa17.34■□□□□ 0.37
PKNOX1-202ENST00000418336 CD300LBA8K4G0 201 aa17.34■□□□□ 0.37
PKNOX1-202ENST00000418336 ALOX5APP20292 161 aa17.34■□□□□ 0.37
PKNOX1-202ENST00000418336 TNFSF4P23510 183 aa17.34■□□□□ 0.37
PKNOX1-202ENST00000418336 POLR2IP36954 125 aaKnown RBP17.34■□□□□ 0.37
PKNOX1-202ENST00000418336 CD200P41217 278 aa17.34■□□□□ 0.37
PKNOX1-202ENST00000418336 SLC6A9P48067 706 aa17.34■□□□□ 0.37
PKNOX1-202ENST00000418336 CX3CR1P49238 355 aa17.34■□□□□ 0.37
PKNOX1-202ENST00000418336 MALLQ13021 153 aa17.34■□□□□ 0.37
PKNOX1-202ENST00000418336 SNAPC1Q16533 368 aa17.34■□□□□ 0.37
PKNOX1-202ENST00000418336 C1orf229Q6ZS94 237 aaPredicted RBP17.34■□□□□ 0.37
PKNOX1-202ENST00000418336 LRRC28Q86X40 367 aaPredicted RBP17.34■□□□□ 0.37
PKNOX1-202ENST00000418336 TMEM186Q96B77 213 aa17.34■□□□□ 0.37
PKNOX1-202ENST00000418336 SGK3Q96BR1 496 aa17.34■□□□□ 0.37
PKNOX1-202ENST00000418336 TEAD3Q99594 435 aa17.34■□□□□ 0.37
PKNOX1-202ENST00000418336 CIB1Q99828 191 aa17.34■□□□□ 0.37
PKNOX1-202ENST00000418336 BEX2Q9BXY8 128 aa17.34■□□□□ 0.37
PKNOX1-202ENST00000418336 TOR3AQ9H497 397 aa17.34■□□□□ 0.37
PKNOX1-202ENST00000418336 LPAR2Q9HBW0 351 aa17.34■□□□□ 0.37
PKNOX1-202ENST00000418336 KRT84Q9NSB2 600 aa17.34■□□□□ 0.37
PKNOX1-202ENST00000418336 HIF1ANQ9NWT6 349 aa17.34■□□□□ 0.37
PKNOX1-202ENST00000418336 KIF17Q9P2E2 1029 aa17.34■□□□□ 0.37
PKNOX1-202ENST00000418336 OAZ3Q9UMX2 235 aa17.34■□□□□ 0.37
PKNOX1-202ENST00000418336 PPP1R3CQ9UQK1 317 aa17.34■□□□□ 0.37
PKNOX1-202ENST00000418336 F5H0A9 414 aaPredicted RBP17.33■□□□□ 0.36
PKNOX1-202ENST00000418336 PLPP2O43688 288 aa17.33■□□□□ 0.36
PKNOX1-202ENST00000418336 FCGR1AP12314 374 aa17.33■□□□□ 0.36
PKNOX1-202ENST00000418336 NAA10P41227 235 aaPredicted RBP17.33■□□□□ 0.36
PKNOX1-202ENST00000418336 HCCSP53701 268 aa17.33■□□□□ 0.36
PKNOX1-202ENST00000418336 SLC3A1Q07837 685 aa17.33■□□□□ 0.36
PKNOX1-202ENST00000418336 APOFQ13790 326 aa17.33■□□□□ 0.36
PKNOX1-202ENST00000418336 KPNB1Q14974 876 aaKnown RBP17.33■□□□□ 0.36
PKNOX1-202ENST00000418336 ZNF181Q2M3W8 571 aa17.33■□□□□ 0.36
PKNOX1-202ENST00000418336 MRPL21Q7Z2W9 205 aaKnown RBP17.33■□□□□ 0.36
PKNOX1-202ENST00000418336 ZDHHC13Q8IUH4 622 aa17.33■□□□□ 0.36
PKNOX1-202ENST00000418336 CELF2-AS1Q8N7Q2 184 aa17.33■□□□□ 0.36
PKNOX1-202ENST00000418336 PYDC1Q8WXC3 89 aa17.33■□□□□ 0.36
PKNOX1-202ENST00000418336 CENPNQ96H22 339 aaPredicted RBP17.33■□□□□ 0.36
PKNOX1-202ENST00000418336 PKP2Q99959 881 aa17.33■□□□□ 0.36
PKNOX1-202ENST00000418336 GABARAPL3Q9BY60 117 aa17.33■□□□□ 0.36
PKNOX1-202ENST00000418336 COPS3Q9UNS2 423 aa17.33■□□□□ 0.36
PKNOX1-202ENST00000418336 COL6A5A8TX70 2615 aa17.33■□□□□ 0.36
PKNOX1-202ENST00000418336 IGHV3-64DA0A0J9YX35 117 aa17.32■□□□□ 0.36
PKNOX1-202ENST00000418336 hCG_38984A0A1B0GV85 526 aa17.32■□□□□ 0.36
PKNOX1-202ENST00000418336 AVPP01185 164 aa17.32■□□□□ 0.36
PKNOX1-202ENST00000418336 LYNP07948 512 aa17.32■□□□□ 0.36
PKNOX1-202ENST00000418336 ZFP36P26651 326 aaKnown RBP17.32■□□□□ 0.36
PKNOX1-202ENST00000418336 THBS2P35442 1172 aa17.32■□□□□ 0.36
PKNOX1-202ENST00000418336 ZNF121P58317 390 aaPredicted RBP17.32■□□□□ 0.36
PKNOX1-202ENST00000418336 FAM3AP98173 230 aa17.32■□□□□ 0.36
PKNOX1-202ENST00000418336 HOXA4Q00056 320 aaPredicted RBP17.32■□□□□ 0.36
PKNOX1-202ENST00000418336 TMEM155Q4W5P6 130 aa17.32■□□□□ 0.36
PKNOX1-202ENST00000418336 RFLNBQ8N5W9 214 aa17.32■□□□□ 0.36
PKNOX1-202ENST00000418336 ZNF454Q8N9F8 522 aa17.32■□□□□ 0.36
PKNOX1-202ENST00000418336 Q8TCH9 128 aa17.32■□□□□ 0.36
PKNOX1-202ENST00000418336 TIMD4Q96H15 378 aa17.32■□□□□ 0.36
PKNOX1-202ENST00000418336 OSBPL10Q9BXB5 764 aa17.32■□□□□ 0.36
PKNOX1-202ENST00000418336 PPP1R3EQ9H7J1 279 aa17.32■□□□□ 0.36
PKNOX1-202ENST00000418336 MRPL15Q9P015 296 aaKnown RBP17.32■□□□□ 0.36
PKNOX1-202ENST00000418336 XRCC2O43543 280 aa17.31■□□□□ 0.36
PKNOX1-202ENST00000418336 CA6P23280 308 aa17.31■□□□□ 0.36
PKNOX1-202ENST00000418336 SLC15A1P46059 708 aa17.31■□□□□ 0.36
PKNOX1-202ENST00000418336 SRP9P49458 86 aaKnown RBP17.31■□□□□ 0.36
PKNOX1-202ENST00000418336 SEC61A1P61619 476 aaKnown RBP17.31■□□□□ 0.36
PKNOX1-202ENST00000418336 BTG1P62324 171 aa17.31■□□□□ 0.36
PKNOX1-202ENST00000418336 MPPED2Q15777 294 aa17.31■□□□□ 0.36
PKNOX1-202ENST00000418336 CCDC121Q6ZUS5 278 aa17.31■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms