RNA–Protein interactions for RNA: ENST00000417285.6

VEGFA-208, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 1,081 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-208ENST00000417285 CST1P01037 141 aa21.24■□□□□ 0.99
VEGFA-208ENST00000417285 RBMXP38159 391 aaKnown RBP21.24■□□□□ 0.99
VEGFA-208ENST00000417285 RPS27P42677 84 aaKnown RBP21.24■□□□□ 0.99
VEGFA-208ENST00000417285 SEC61A1P61619 476 aaKnown RBP21.24■□□□□ 0.99
VEGFA-208ENST00000417285 NAA40Q86UY6 237 aa21.24■□□□□ 0.99
VEGFA-208ENST00000417285 SPRYD4Q8WW59 207 aaPredicted RBP21.24■□□□□ 0.99
VEGFA-208ENST00000417285 ZNRF4Q8WWF5 429 aa21.24■□□□□ 0.99
VEGFA-208ENST00000417285 SLCO4A1Q96BD0 722 aa21.24■□□□□ 0.99
VEGFA-208ENST00000417285 DDX28Q9NUL7 540 aaKnown RBP21.24■□□□□ 0.99
VEGFA-208ENST00000417285 AQP12BA6NM10 295 aa21.23■□□□□ 0.99
VEGFA-208ENST00000417285 RIIAD1A6NNX1 92 aa21.23■□□□□ 0.99
VEGFA-208ENST00000417285 CYB5R3P00387 301 aaPredicted RBP21.23■□□□□ 0.99
VEGFA-208ENST00000417285 PPIAL4GP0DN37 164 aa21.23■□□□□ 0.99
VEGFA-208ENST00000417285 IRF2P14316 349 aa21.23■□□□□ 0.99
VEGFA-208ENST00000417285 ZNF3P17036 446 aa21.23■□□□□ 0.99
VEGFA-208ENST00000417285 HOXB6P17509 224 aaKnown RBP21.23■□□□□ 0.99
VEGFA-208ENST00000417285 SPI1P17947 270 aa21.23■□□□□ 0.99
VEGFA-208ENST00000417285 ENTPD1P49961 510 aa21.23■□□□□ 0.99
VEGFA-208ENST00000417285 PAX8Q06710 450 aa21.23■□□□□ 0.99
VEGFA-208ENST00000417285 LYPD4Q6UWN0 246 aa21.23■□□□□ 0.99
VEGFA-208ENST00000417285 CD300LDQ6UXZ3 194 aa21.23■□□□□ 0.99
VEGFA-208ENST00000417285 TRPM8Q7Z2W7 1104 aa21.23■□□□□ 0.99
VEGFA-208ENST00000417285 DCXRQ7Z4W1 244 aa21.23■□□□□ 0.99
VEGFA-208ENST00000417285 AQP12AQ8IXF9 295 aa21.23■□□□□ 0.99
VEGFA-208ENST00000417285 ADGRG5Q8IZF4 528 aa21.23■□□□□ 0.99
VEGFA-208ENST00000417285 OR10S1Q8NGN2 331 aa21.23■□□□□ 0.99
VEGFA-208ENST00000417285 TEX47Q8TBZ9 253 aa21.23■□□□□ 0.99
VEGFA-208ENST00000417285 GIPC3Q8TF64 312 aa21.23■□□□□ 0.99
VEGFA-208ENST00000417285 NIPSNAP1Q9BPW8 284 aa21.23■□□□□ 0.99
VEGFA-208ENST00000417285 SSBP3Q9BWW4 388 aaPredicted RBP21.23■□□□□ 0.99
VEGFA-208ENST00000417285 NMNAT2Q9BZQ4 307 aa21.23■□□□□ 0.99
VEGFA-208ENST00000417285 ARRDC5A6NEK1 342 aa21.22■□□□□ 0.99
VEGFA-208ENST00000417285 GNGT2O14610 69 aa21.22■□□□□ 0.99
VEGFA-208ENST00000417285 GYPBP06028 91 aa21.22■□□□□ 0.99
VEGFA-208ENST00000417285 SPARCP09486 303 aa21.22■□□□□ 0.99
VEGFA-208ENST00000417285 RPS2P15880 293 aaKnown RBP21.22■□□□□ 0.99
VEGFA-208ENST00000417285 BLVRAP53004 296 aa21.22■□□□□ 0.99
VEGFA-208ENST00000417285 BTNL3Q6UXE8 466 aa21.22■□□□□ 0.99
VEGFA-208ENST00000417285 LRRN1Q6UXK5 716 aa21.22■□□□□ 0.99
VEGFA-208ENST00000417285 NLRC3Q7RTR2 1065 aa21.22■□□□□ 0.99
VEGFA-208ENST00000417285 MRPL21Q7Z2W9 205 aaKnown RBP21.22■□□□□ 0.99
VEGFA-208ENST00000417285 KLBQ86Z14 1044 aa21.22■□□□□ 0.99
VEGFA-208ENST00000417285 C3orf56Q8N813 242 aa21.22■□□□□ 0.99
VEGFA-208ENST00000417285 ZDHHC22Q8N966 263 aa21.22■□□□□ 0.99
VEGFA-208ENST00000417285 OR6K6Q8NGW6 343 aa21.22■□□□□ 0.99
VEGFA-208ENST00000417285 OR11L1Q8NGX0 322 aa21.22■□□□□ 0.99
VEGFA-208ENST00000417285 Q8TCH9 128 aa21.22■□□□□ 0.99
VEGFA-208ENST00000417285 C22orf15Q8WYQ4 148 aa21.22■□□□□ 0.99
VEGFA-208ENST00000417285 NEIL1Q96FI4 390 aaPredicted RBP21.22■□□□□ 0.99
VEGFA-208ENST00000417285 FEVQ99581 238 aa21.22■□□□□ 0.99
VEGFA-208ENST00000417285 TMEM246Q9BRR3 403 aa21.22■□□□□ 0.99
VEGFA-208ENST00000417285 COPS4Q9BT78 406 aa21.22■□□□□ 0.99
VEGFA-208ENST00000417285 PPIAL4AQ9Y536 164 aa21.22■□□□□ 0.99
VEGFA-208ENST00000417285 DHRS12A0PJE2 317 aa21.21■□□□□ 0.99
VEGFA-208ENST00000417285 H3BN98 237 aa21.21■□□□□ 0.99
VEGFA-208ENST00000417285 HLA-DPB1P04440 258 aa21.21■□□□□ 0.99
VEGFA-208ENST00000417285 OTX1P32242 354 aaPredicted RBP21.21■□□□□ 0.99
VEGFA-208ENST00000417285 CD200P41217 278 aa21.21■□□□□ 0.99
VEGFA-208ENST00000417285 TAF13Q15543 124 aa21.21■□□□□ 0.99
VEGFA-208ENST00000417285 TUSC1Q2TAM9 212 aa21.21■□□□□ 0.99
VEGFA-208ENST00000417285 ZNF404Q494X3 552 aa21.21■□□□□ 0.99
VEGFA-208ENST00000417285 DNAL1Q4LDG9 190 aa21.21■□□□□ 0.99
VEGFA-208ENST00000417285 TEX30Q5JUR7 227 aa21.21■□□□□ 0.99
VEGFA-208ENST00000417285 DRAM2Q6UX65 266 aa21.21■□□□□ 0.99
VEGFA-208ENST00000417285 CMC2Q9NRP2 79 aa21.21■□□□□ 0.99
VEGFA-208ENST00000417285 ZNF593O00488 134 aaPredicted RBP21.2■□□□□ 0.98
VEGFA-208ENST00000417285 GYG2O15488 501 aa21.2■□□□□ 0.98
VEGFA-208ENST00000417285 GMDSO60547 372 aa21.2■□□□□ 0.98
VEGFA-208ENST00000417285 ZNF205O95201 554 aa21.2■□□□□ 0.98
VEGFA-208ENST00000417285 CD80P33681 288 aa21.2■□□□□ 0.98
VEGFA-208ENST00000417285 PMELP40967 661 aa21.2■□□□□ 0.98
VEGFA-208ENST00000417285 RAD23AP54725 363 aa21.2■□□□□ 0.98
VEGFA-208ENST00000417285 PRSS12P56730 875 aa21.2■□□□□ 0.98
VEGFA-208ENST00000417285 GNB2P62879 340 aa21.2■□□□□ 0.98
VEGFA-208ENST00000417285 MAB21L1Q13394 359 aa21.2■□□□□ 0.98
VEGFA-208ENST00000417285 PCK2Q16822 640 aa21.2■□□□□ 0.98
VEGFA-208ENST00000417285 DOK3Q7L591 496 aa21.2■□□□□ 0.98
VEGFA-208ENST00000417285 ZNF511Q8NB15 262 aa21.2■□□□□ 0.98
VEGFA-208ENST00000417285 PLPP7Q8NBV4 271 aa21.2■□□□□ 0.98
VEGFA-208ENST00000417285 OR8B3Q8NGG8 313 aa21.2■□□□□ 0.98
VEGFA-208ENST00000417285 BCAS4Q8TDM0 211 aa21.2■□□□□ 0.98
VEGFA-208ENST00000417285 CANT1Q8WVQ1 401 aa21.2■□□□□ 0.98
VEGFA-208ENST00000417285 SLAMF6Q96DU3 332 aa21.2■□□□□ 0.98
VEGFA-208ENST00000417285 OR8B2Q96RD0 313 aa21.2■□□□□ 0.98
VEGFA-208ENST00000417285 ESM1Q9NQ30 184 aa21.2■□□□□ 0.98
VEGFA-208ENST00000417285 IGHV3-64DA0A0J9YX35 117 aa21.19■□□□□ 0.98
VEGFA-208ENST00000417285 CD300LBA8K4G0 201 aa21.19■□□□□ 0.98
VEGFA-208ENST00000417285 CLUP10909 449 aa21.19■□□□□ 0.98
VEGFA-208ENST00000417285 PSKH1P11801 424 aa21.19■□□□□ 0.98
VEGFA-208ENST00000417285 GRK5P34947 590 aa21.19■□□□□ 0.98
VEGFA-208ENST00000417285 UBA52P62987 128 aaKnown RBP21.19■□□□□ 0.98
VEGFA-208ENST00000417285 PAX2Q02962 417 aa21.19■□□□□ 0.98
VEGFA-208ENST00000417285 SNAI3Q3KNW1 292 aa21.19■□□□□ 0.98
VEGFA-208ENST00000417285 KLF17Q5JT82 389 aaPredicted RBP21.19■□□□□ 0.98
VEGFA-208ENST00000417285 RAB40AQ8WXH6 277 aa21.19■□□□□ 0.98
VEGFA-208ENST00000417285 ZMYND19Q96E35 227 aaPredicted RBP21.19■□□□□ 0.98
VEGFA-208ENST00000417285 KCNJ15Q99712 375 aa21.19■□□□□ 0.98
VEGFA-208ENST00000417285 ZMAT3Q9HA38 289 aaKnown RBP21.19■□□□□ 0.98
VEGFA-208ENST00000417285 CENPMQ9NSP4 180 aa21.19■□□□□ 0.98
VEGFA-208ENST00000417285 ZNF69Q9UC07 566 aa21.19■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms