RNA–Protein interactions for RNA: ENST00000416571.5

MDC1-202, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 3

Gene MDC1, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-202ENST00000416571 ST8SIA4Q92187 359 aa8.28□□□□□ -1.08
MDC1-202ENST00000416571 FAM46AQ96IP4 442 aaKnown RBP8.28□□□□□ -1.08
MDC1-202ENST00000416571 ATF6BQ99941 703 aa8.28□□□□□ -1.08
MDC1-202ENST00000416571 SIKE1Q9BRV8 207 aa8.28□□□□□ -1.08
MDC1-202ENST00000416571 CNTD2Q9H8S5 307 aa8.28□□□□□ -1.08
MDC1-202ENST00000416571 SMURF1Q9HCE7 757 aa8.28□□□□□ -1.08
MDC1-202ENST00000416571 ONECUT1Q9UBC0 465 aa8.28□□□□□ -1.08
MDC1-202ENST00000416571 IER3IP1Q9Y5U9 82 aa8.28□□□□□ -1.08
MDC1-202ENST00000416571 SNX13Q9Y5W8 968 aa8.28□□□□□ -1.08
MDC1-202ENST00000416571 KPTNQ9Y664 436 aa8.28□□□□□ -1.08
MDC1-202ENST00000416571 LHFPL6Q9Y693 200 aa8.28□□□□□ -1.08
MDC1-202ENST00000416571 EPPK1P58107 5090 aaKnown RBP8.27□□□□□ -1.09
MDC1-202ENST00000416571 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP8.27□□□□□ -1.09
MDC1-202ENST00000416571 GGT3PA6NGU5 568 aa8.27□□□□□ -1.09
MDC1-202ENST00000416571 BBIP1A8MTZ0 92 aa8.27□□□□□ -1.09
MDC1-202ENST00000416571 FXYD1O00168 92 aa8.27□□□□□ -1.09
MDC1-202ENST00000416571 IMPA2O14732 288 aa8.27□□□□□ -1.09
MDC1-202ENST00000416571 OR10H3O60404 316 aa8.27□□□□□ -1.09
MDC1-202ENST00000416571 GMDSO60547 372 aa8.27□□□□□ -1.09
MDC1-202ENST00000416571 TSPAN9O75954 239 aa8.27□□□□□ -1.09
MDC1-202ENST00000416571 PAHP00439 452 aa8.27□□□□□ -1.09
MDC1-202ENST00000416571 ACSM4P0C7M7 580 aa8.27□□□□□ -1.09
MDC1-202ENST00000416571 GGT2P36268 569 aa8.27□□□□□ -1.09
MDC1-202ENST00000416571 TPTEP56180 551 aa8.27□□□□□ -1.09
MDC1-202ENST00000416571 GUCA2AQ02747 115 aa8.27□□□□□ -1.09
MDC1-202ENST00000416571 MZT1Q08AG7 82 aa8.27□□□□□ -1.09
MDC1-202ENST00000416571 COX10Q12887 443 aa8.27□□□□□ -1.09
MDC1-202ENST00000416571 MAPRE2Q15555 327 aa8.27□□□□□ -1.09
MDC1-202ENST00000416571 BEAN1Q3B7T3 259 aa8.27□□□□□ -1.09
MDC1-202ENST00000416571 SLC36A3Q495N2 470 aa8.27□□□□□ -1.09
MDC1-202ENST00000416571 CDONQ4KMG0 1287 aa8.27□□□□□ -1.09
MDC1-202ENST00000416571 IFI44LQ53G44 452 aa8.27□□□□□ -1.09
MDC1-202ENST00000416571 COQ5Q5HYK3 327 aa8.27□□□□□ -1.09
MDC1-202ENST00000416571 PTCHD4Q6ZW05 846 aa8.27□□□□□ -1.09
MDC1-202ENST00000416571 FKBP9P1Q75LS8 142 aa8.27□□□□□ -1.09
MDC1-202ENST00000416571 VTCN1Q7Z7D3 282 aa8.27□□□□□ -1.09
MDC1-202ENST00000416571 LINC00346Q8IVM7 164 aa8.27□□□□□ -1.09
MDC1-202ENST00000416571 PIP4P2Q8N4L2 257 aa8.27□□□□□ -1.09
MDC1-202ENST00000416571 SPERTQ8NA61 448 aa8.27□□□□□ -1.09
MDC1-202ENST00000416571 PLPP7Q8NBV4 271 aa8.27□□□□□ -1.09
MDC1-202ENST00000416571 NPRL2Q8WTW4 380 aa8.27□□□□□ -1.09
MDC1-202ENST00000416571 TSSK2Q96PF2 358 aa8.27□□□□□ -1.09
MDC1-202ENST00000416571 GPX7Q96SL4 187 aaPredicted RBP8.27□□□□□ -1.09
MDC1-202ENST00000416571 TMEM120AQ9BXJ8 343 aa8.27□□□□□ -1.09
MDC1-202ENST00000416571 KRCC1Q9NPI7 259 aaPredicted RBP8.27□□□□□ -1.09
MDC1-202ENST00000416571 NRIP3Q9NQ35 241 aa8.27□□□□□ -1.09
MDC1-202ENST00000416571 MRGBPQ9NV56 204 aa8.27□□□□□ -1.09
MDC1-202ENST00000416571 INTS9Q9NV88 658 aaKnown RBP8.27□□□□□ -1.09
MDC1-202ENST00000416571 GID8Q9NWU2 228 aa8.27□□□□□ -1.09
MDC1-202ENST00000416571 C1orf123Q9NWV4 160 aa8.27□□□□□ -1.09
MDC1-202ENST00000416571 ZNRD1Q9P1U0 126 aa8.27□□□□□ -1.09
MDC1-202ENST00000416571 RPUSD1Q9UJJ7 312 aaKnown RBP8.27□□□□□ -1.09
MDC1-202ENST00000416571 SIGLEC7Q9Y286 467 aa8.27□□□□□ -1.09
MDC1-202ENST00000416571 CD300LBA8K4G0 201 aa8.26□□□□□ -1.09
MDC1-202ENST00000416571 M0R135 149 aa8.26□□□□□ -1.09
MDC1-202ENST00000416571 FFAR1O14842 300 aa8.26□□□□□ -1.09
MDC1-202ENST00000416571 RENP00797 406 aa8.26□□□□□ -1.09
MDC1-202ENST00000416571 HLA-DQA2P01906 255 aa8.26□□□□□ -1.09
MDC1-202ENST00000416571 OPN1MWP04001 364 aa8.26□□□□□ -1.09
MDC1-202ENST00000416571 GRPP07492 148 aa8.26□□□□□ -1.09
MDC1-202ENST00000416571 OPN1MW2P0DN77 364 aa8.26□□□□□ -1.09
MDC1-202ENST00000416571 OPN1MW3P0DN78 364 aa8.26□□□□□ -1.09
MDC1-202ENST00000416571 ZNF26P17031 533 aaPredicted RBP8.26□□□□□ -1.09
MDC1-202ENST00000416571 GABRA5P31644 462 aa8.26□□□□□ -1.09
MDC1-202ENST00000416571 MDH1P40925 334 aaKnown RBP8.26□□□□□ -1.09
MDC1-202ENST00000416571 CDKN2AP42771 156 aaKnown RBP8.26□□□□□ -1.09
MDC1-202ENST00000416571 TRAP1Q12931 704 aaKnown RBP8.26□□□□□ -1.09
MDC1-202ENST00000416571 HERPUD1Q15011 391 aa8.26□□□□□ -1.09
MDC1-202ENST00000416571 FGD3Q5JSP0 725 aa8.26□□□□□ -1.09
MDC1-202ENST00000416571 DPY19L2P2Q6ZN68 376 aa8.26□□□□□ -1.09
MDC1-202ENST00000416571 CFAP77Q6ZQR2 320 aa8.26□□□□□ -1.09
MDC1-202ENST00000416571 TSEN54Q7Z6J9 526 aaKnown RBP8.26□□□□□ -1.09
MDC1-202ENST00000416571 FAM90A1Q86YD7 464 aa8.26□□□□□ -1.09
MDC1-202ENST00000416571 OR5R1Q8NH85 324 aa8.26□□□□□ -1.09
MDC1-202ENST00000416571 SPTSSAQ969W0 71 aa8.26□□□□□ -1.09
MDC1-202ENST00000416571 ZNF799Q96GE5 643 aa8.26□□□□□ -1.09
MDC1-202ENST00000416571 RSRC1Q96IZ7 334 aaKnown RBP8.26□□□□□ -1.09
MDC1-202ENST00000416571 ATP6V1G3Q96LB4 118 aa8.26□□□□□ -1.09
MDC1-202ENST00000416571 NSRP1Q9H0G5 558 aaKnown RBP8.26□□□□□ -1.09
MDC1-202ENST00000416571 SEMA6AQ9H2E6 1030 aa8.26□□□□□ -1.09
MDC1-202ENST00000416571 PPA2Q9H2U2 334 aa8.26□□□□□ -1.09
MDC1-202ENST00000416571 ANKRD19PQ9H560 264 aa8.26□□□□□ -1.09
MDC1-202ENST00000416571 SRA1Q9HD15 236 aaKnown RBP8.26□□□□□ -1.09
MDC1-202ENST00000416571 SIRT7Q9NRC8 400 aa8.26□□□□□ -1.09
MDC1-202ENST00000416571 C14orf119Q9NWQ9 140 aa8.26□□□□□ -1.09
MDC1-202ENST00000416571 IGHV3OR15-7A0A075B7D8 119 aa8.25□□□□□ -1.09
MDC1-202ENST00000416571 DCTN6O00399 190 aa8.25□□□□□ -1.09
MDC1-202ENST00000416571 BHLHE40O14503 412 aa8.25□□□□□ -1.09
MDC1-202ENST00000416571 GSTA4O15217 222 aa8.25□□□□□ -1.09
MDC1-202ENST00000416571 PPP1R3DO95685 299 aa8.25□□□□□ -1.09
MDC1-202ENST00000416571 PTBP3O95758 552 aaKnown RBP8.25□□□□□ -1.09
MDC1-202ENST00000416571 PRB2P02812 416 aaPredicted RBP8.25□□□□□ -1.09
MDC1-202ENST00000416571 TROVE2P10155 538 aaKnown RBP eCLIP8.25□□□□□ -1.09
MDC1-202ENST00000416571 GRK5P34947 590 aa8.25□□□□□ -1.09
MDC1-202ENST00000416571 POU4F2Q12837 409 aa8.25□□□□□ -1.09
MDC1-202ENST00000416571 MICBQ29980 383 aa8.25□□□□□ -1.09
MDC1-202ENST00000416571 RSPO1Q2MKA7 263 aaPredicted RBP8.25□□□□□ -1.09
MDC1-202ENST00000416571 SLC35E4Q6ICL7 350 aa8.25□□□□□ -1.09
MDC1-202ENST00000416571 SLC18B1Q6NT16 456 aa8.25□□□□□ -1.09
MDC1-202ENST00000416571 Q6ZPA2 131 aa8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms