RNA–Protein interactions for RNA: ENST00000415950.4

SCN1B-202, Transcript of sodium voltage-gated channel beta subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SCN1B, Length 4,537 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1B-202ENST00000415950 CBLN2Q8IUK8 224 aa11.67□□□□□ -0.54
SCN1B-202ENST00000415950 NKAIN3Q8N8D7 197 aa11.67□□□□□ -0.54
SCN1B-202ENST00000415950 OR14A16Q8NHC5 309 aa11.67□□□□□ -0.54
SCN1B-202ENST00000415950 FLVCR1Q9Y5Y0 555 aa11.67□□□□□ -0.54
SCN1B-202ENST00000415950 PHOX2AO14813 284 aa11.67□□□□□ -0.54
SCN1B-202ENST00000415950 PLPP2O43688 288 aa11.67□□□□□ -0.54
SCN1B-202ENST00000415950 ANKRD34CP0C6C1 535 aa11.67□□□□□ -0.54
SCN1B-202ENST00000415950 HNF1AP20823 631 aa11.67□□□□□ -0.54
SCN1B-202ENST00000415950 MRM1Q6IN84 353 aaKnown RBP11.67□□□□□ -0.54
SCN1B-202ENST00000415950 CLRN3Q8NCR9 226 aa11.67□□□□□ -0.54
SCN1B-202ENST00000415950 BPIFCQ8NFQ6 507 aa11.67□□□□□ -0.54
SCN1B-202ENST00000415950 OR10AC1Q8NH08 325 aa11.67□□□□□ -0.54
SCN1B-202ENST00000415950 MSI2Q96DH6 328 aaKnown RBP11.67□□□□□ -0.54
SCN1B-202ENST00000415950 H3BP45 60 aa11.67□□□□□ -0.54
SCN1B-202ENST00000415950 F12P00748 615 aaPredicted RBP11.67□□□□□ -0.54
SCN1B-202ENST00000415950 GSTP1P09211 210 aaKnown RBP11.67□□□□□ -0.54
SCN1B-202ENST00000415950 NTF3P20783 257 aa11.67□□□□□ -0.54
SCN1B-202ENST00000415950 AADACP22760 399 aa11.67□□□□□ -0.54
SCN1B-202ENST00000415950 GABRA4P48169 554 aa11.67□□□□□ -0.54
SCN1B-202ENST00000415950 FABP6P51161 128 aa11.67□□□□□ -0.54
SCN1B-202ENST00000415950 MESP2Q0VG99 397 aa11.67□□□□□ -0.54
SCN1B-202ENST00000415950 TCTN1Q2MV58 587 aa11.67□□□□□ -0.54
SCN1B-202ENST00000415950 IL34Q6ZMJ4 242 aa11.67□□□□□ -0.54
SCN1B-202ENST00000415950 SYT13Q7L8C5 426 aa11.67□□□□□ -0.54
SCN1B-202ENST00000415950 NAXDQ8IW45 347 aa11.67□□□□□ -0.54
SCN1B-202ENST00000415950 DND1Q8IYX4 353 aaKnown RBP11.67□□□□□ -0.54
SCN1B-202ENST00000415950 RDH5Q92781 318 aa11.67□□□□□ -0.54
SCN1B-202ENST00000415950 OR6C1Q96RD1 312 aa11.67□□□□□ -0.54
SCN1B-202ENST00000415950 KIR3DX1Q9H7L2 352 aa11.67□□□□□ -0.54
SCN1B-202ENST00000415950 CA10Q9NS85 328 aa11.67□□□□□ -0.54
SCN1B-202ENST00000415950 AK3Q9UIJ7 227 aa11.67□□□□□ -0.54
SCN1B-202ENST00000415950 MRPS2Q9Y399 296 aaKnown RBP11.67□□□□□ -0.54
SCN1B-202ENST00000415950 ENSAO43768 121 aaKnown RBP11.66□□□□□ -0.54
SCN1B-202ENST00000415950 PDGFBP01127 241 aaPredicted RBP11.66□□□□□ -0.54
SCN1B-202ENST00000415950 GRPP07492 148 aa11.66□□□□□ -0.54
SCN1B-202ENST00000415950 TNFRSF4P43489 277 aa11.66□□□□□ -0.54
SCN1B-202ENST00000415950 ZNF77Q15935 545 aa11.66□□□□□ -0.54
SCN1B-202ENST00000415950 CPEB4Q17RY0 729 aaKnown RBP eCLIP11.66□□□□□ -0.54
SCN1B-202ENST00000415950 VWA2Q5GFL6 755 aa11.66□□□□□ -0.54
SCN1B-202ENST00000415950 SLC35D3Q5M8T2 416 aa11.66□□□□□ -0.54
SCN1B-202ENST00000415950 H1FNTQ75WM6 255 aaPredicted RBP11.66□□□□□ -0.54
SCN1B-202ENST00000415950 ZFP62Q8NB50 900 aaPredicted RBP11.66□□□□□ -0.54
SCN1B-202ENST00000415950 RXFP4Q8TDU9 374 aa11.66□□□□□ -0.54
SCN1B-202ENST00000415950 ADGRL4Q9HBW9 690 aa11.66□□□□□ -0.54
SCN1B-202ENST00000415950 KCND3Q9UK17 655 aa11.66□□□□□ -0.54
SCN1B-202ENST00000415950 PADI1Q9ULC6 663 aa11.66□□□□□ -0.54
SCN1B-202ENST00000415950 COL5A3P25940 1745 aaPredicted RBP11.66□□□□□ -0.54
SCN1B-202ENST00000415950 CSF2RBP32927 897 aa11.66□□□□□ -0.54
SCN1B-202ENST00000415950 PSMB3P49720 205 aa11.66□□□□□ -0.54
SCN1B-202ENST00000415950 CRYBA2P53672 197 aa11.66□□□□□ -0.54
SCN1B-202ENST00000415950 SPANXN5Q5MJ07 72 aa11.66□□□□□ -0.54
SCN1B-202ENST00000415950 OR5AS1Q8N127 324 aa11.66□□□□□ -0.54
SCN1B-202ENST00000415950 ZCCHC4Q9H5U6 513 aa11.66□□□□□ -0.54
SCN1B-202ENST00000415950 UFSP2Q9NUQ7 469 aa11.66□□□□□ -0.54
SCN1B-202ENST00000415950 NOSIPQ9Y314 301 aaKnown RBP11.66□□□□□ -0.54
SCN1B-202ENST00000415950 HSFX4A0A1B0GTS1 333 aaPredicted RBP11.66□□□□□ -0.54
SCN1B-202ENST00000415950 HSFX3A0A1B0GWH4 333 aaPredicted RBP11.66□□□□□ -0.54
SCN1B-202ENST00000415950 CD37P11049 281 aa11.66□□□□□ -0.54
SCN1B-202ENST00000415950 RPL12P30050 165 aaKnown RBP11.66□□□□□ -0.54
SCN1B-202ENST00000415950 PPP2CBP62714 309 aa11.66□□□□□ -0.54
SCN1B-202ENST00000415950 PPP2CAP67775 309 aa11.66□□□□□ -0.54
SCN1B-202ENST00000415950 AARDQ4LEZ3 155 aa11.66□□□□□ -0.54
SCN1B-202ENST00000415950 LPCAT3Q6P1A2 487 aa11.66□□□□□ -0.54
SCN1B-202ENST00000415950 TRILQ7L0X0 811 aa11.66□□□□□ -0.54
SCN1B-202ENST00000415950 ZAR1Q86SH2 424 aa11.66□□□□□ -0.54
SCN1B-202ENST00000415950 RFLNBQ8N5W9 214 aa11.66□□□□□ -0.54
SCN1B-202ENST00000415950 ZNF727A8MUV8 499 aa11.65□□□□□ -0.54
SCN1B-202ENST00000415950 CTSVO60911 334 aa11.65□□□□□ -0.54
SCN1B-202ENST00000415950 NQO2P16083 231 aa11.65□□□□□ -0.54
SCN1B-202ENST00000415950 HOXA1P49639 335 aaPredicted RBP11.65□□□□□ -0.54
SCN1B-202ENST00000415950 ASCL1P50553 236 aa11.65□□□□□ -0.54
SCN1B-202ENST00000415950 CDONQ4KMG0 1287 aa11.65□□□□□ -0.54
SCN1B-202ENST00000415950 FAM58AQ8N1B3 248 aa11.65□□□□□ -0.54
SCN1B-202ENST00000415950 SYS1Q8N2H4 156 aa11.65□□□□□ -0.54
SCN1B-202ENST00000415950 KIRREL1Q96J84 757 aa11.65□□□□□ -0.54
SCN1B-202ENST00000415950 CHST6Q9GZX3 395 aa11.65□□□□□ -0.54
SCN1B-202ENST00000415950 NXF2Q9GZY0 626 aaKnown RBP11.65□□□□□ -0.54
SCN1B-202ENST00000415950 EVA1AQ9H8M9 152 aa11.65□□□□□ -0.54
SCN1B-202ENST00000415950 V9GYS6 101 aa11.65□□□□□ -0.54
SCN1B-202ENST00000415950 MIA3Q5JRA6 1907 aa11.65□□□□□ -0.54
SCN1B-202ENST00000415950 SHISA3A0PJX4 238 aa11.65□□□□□ -0.54
SCN1B-202ENST00000415950 HLA-HP01893 362 aa11.65□□□□□ -0.54
SCN1B-202ENST00000415950 CEACAM5P06731 702 aa11.65□□□□□ -0.54
SCN1B-202ENST00000415950 CD1CP29017 333 aa11.65□□□□□ -0.54
SCN1B-202ENST00000415950 TSEN54Q7Z6J9 526 aaKnown RBP11.65□□□□□ -0.54
SCN1B-202ENST00000415950 GVQW1Q8N7I0 195 aa11.65□□□□□ -0.54
SCN1B-202ENST00000415950 TSFMP43897 325 aaKnown RBP11.65□□□□□ -0.54
SCN1B-202ENST00000415950 AGFG1P52594 562 aaKnown RBP11.65□□□□□ -0.54
SCN1B-202ENST00000415950 SLC35A1P78382 337 aa11.65□□□□□ -0.54
SCN1B-202ENST00000415950 CLEC9AQ6UXN8 241 aa11.65□□□□□ -0.54
SCN1B-202ENST00000415950 SLC16A13Q7RTY0 426 aa11.65□□□□□ -0.54
SCN1B-202ENST00000415950 ARIH2OSQ8N7S6 290 aa11.65□□□□□ -0.54
SCN1B-202ENST00000415950 GJC3Q8NFK1 279 aa11.65□□□□□ -0.54
SCN1B-202ENST00000415950 OR1M1Q8NGA1 313 aa11.65□□□□□ -0.54
SCN1B-202ENST00000415950 OR4A16Q8NH70 328 aa11.65□□□□□ -0.54
SCN1B-202ENST00000415950 TSLPQ969D9 159 aa11.65□□□□□ -0.54
SCN1B-202ENST00000415950 SLAMF6Q96DU3 332 aa11.65□□□□□ -0.54
SCN1B-202ENST00000415950 LRFN5Q96NI6 719 aa11.65□□□□□ -0.54
SCN1B-202ENST00000415950 SEMA6CQ9H3T2 930 aa11.65□□□□□ -0.54
SCN1B-202ENST00000415950 GPR84Q9NQS5 396 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms