RNA–Protein interactions for RNA: ENST00000415600.6

PTPRU-203, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 5

Gene PTPRU, Length 1,590 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-203ENST00000415600 GDI2P50395 445 aaKnown RBP17.51■□□□□ 0.39
PTPRU-203ENST00000415600 CTXN1P60606 82 aa17.51■□□□□ 0.39
PTPRU-203ENST00000415600 CR1LQ2VPA4 569 aa17.51■□□□□ 0.39
PTPRU-203ENST00000415600 PABPC1L2AQ5JQF8 200 aa17.51■□□□□ 0.39
PTPRU-203ENST00000415600 FAM209AQ5JX71 171 aa17.51■□□□□ 0.39
PTPRU-203ENST00000415600 FAM27BQ5VT28 67 aa17.51■□□□□ 0.39
PTPRU-203ENST00000415600 ARL9Q6T311 187 aa17.51■□□□□ 0.39
PTPRU-203ENST00000415600 OPALINQ96PE5 141 aa17.51■□□□□ 0.39
PTPRU-203ENST00000415600 OR51B6Q9H340 312 aa17.51■□□□□ 0.39
PTPRU-203ENST00000415600 DNHD1Q96M86 4753 aa17.5■□□□□ 0.39
PTPRU-203ENST00000415600 C17orf100A8MU93 164 aa17.5■□□□□ 0.39
PTPRU-203ENST00000415600 LYNX1G3V0Z9 82 aa17.5■□□□□ 0.39
PTPRU-203ENST00000415600 J3QRE1 110 aa17.5■□□□□ 0.39
PTPRU-203ENST00000415600 CCRL2O00421 344 aa17.5■□□□□ 0.39
PTPRU-203ENST00000415600 IMPA2O14732 288 aa17.5■□□□□ 0.39
PTPRU-203ENST00000415600 APOL3O95236 402 aa17.5■□□□□ 0.39
PTPRU-203ENST00000415600 TFP02787 698 aa17.5■□□□□ 0.39
PTPRU-203ENST00000415600 HPXP02790 462 aa17.5■□□□□ 0.39
PTPRU-203ENST00000415600 CD14P08571 375 aa17.5■□□□□ 0.39
PTPRU-203ENST00000415600 MMP7P09237 267 aaPredicted RBP17.5■□□□□ 0.39
PTPRU-203ENST00000415600 HSMCR30P0CW71 290 aa17.5■□□□□ 0.39
PTPRU-203ENST00000415600 LYNX1P0DP58 116 aa17.5■□□□□ 0.39
PTPRU-203ENST00000415600 HIST1H1CP16403 213 aaKnown RBP17.5■□□□□ 0.39
PTPRU-203ENST00000415600 SRP14P37108 136 aaKnown RBP17.5■□□□□ 0.39
PTPRU-203ENST00000415600 KHDRBS1Q07666 443 aaKnown RBP eCLIP17.5■□□□□ 0.39
PTPRU-203ENST00000415600 MLLT11Q13015 90 aaPredicted RBP17.5■□□□□ 0.39
PTPRU-203ENST00000415600 SCGB2A2Q13296 93 aa17.5■□□□□ 0.39
PTPRU-203ENST00000415600 DOC2BQ14184 412 aa17.5■□□□□ 0.39
PTPRU-203ENST00000415600 SPCS2Q15005 226 aa17.5■□□□□ 0.39
PTPRU-203ENST00000415600 ELFN2Q5R3F8 820 aa17.5■□□□□ 0.39
PTPRU-203ENST00000415600 OR52E2Q8NGJ4 325 aa17.5■□□□□ 0.39
PTPRU-203ENST00000415600 ZFAND2BQ8WV99 257 aa17.5■□□□□ 0.39
PTPRU-203ENST00000415600 DECR2Q9NUI1 292 aa17.5■□□□□ 0.39
PTPRU-203ENST00000415600 HAO2Q9NYQ3 351 aa17.5■□□□□ 0.39
PTPRU-203ENST00000415600 NKIRAS2Q9NYR9 191 aa17.5■□□□□ 0.39
PTPRU-203ENST00000415600 MYEF2Q9P2K5 600 aaKnown RBP17.5■□□□□ 0.39
PTPRU-203ENST00000415600 ADAM18Q9Y3Q7 739 aa17.5■□□□□ 0.39
PTPRU-203ENST00000415600 IGLV3-9A0A075B6K5 115 aa17.49■□□□□ 0.39
PTPRU-203ENST00000415600 XKRYO14609 159 aa17.49■□□□□ 0.39
PTPRU-203ENST00000415600 TPD52L2O43399 206 aaKnown RBP17.49■□□□□ 0.39
PTPRU-203ENST00000415600 PPIHO43447 177 aaKnown RBP17.49■□□□□ 0.39
PTPRU-203ENST00000415600 LIMS3P0CW19 117 aa17.49■□□□□ 0.39
PTPRU-203ENST00000415600 LIMS4P0CW20 117 aa17.49■□□□□ 0.39
PTPRU-203ENST00000415600 WNT4P56705 351 aa17.49■□□□□ 0.39
PTPRU-203ENST00000415600 TSTQ16762 297 aaKnown RBP17.49■□□□□ 0.39
PTPRU-203ENST00000415600 ZNF718Q3SXZ3 478 aa17.49■□□□□ 0.39
PTPRU-203ENST00000415600 KLHL12Q53G59 568 aa17.49■□□□□ 0.39
PTPRU-203ENST00000415600 LIPNQ5VXI9 398 aa17.49■□□□□ 0.39
PTPRU-203ENST00000415600 SHFQ7M4L6 423 aa17.49■□□□□ 0.39
PTPRU-203ENST00000415600 PAQR4Q8N4S7 273 aaPredicted RBP17.49■□□□□ 0.39
PTPRU-203ENST00000415600 CYB561A3Q8NBI2 242 aa17.49■□□□□ 0.39
PTPRU-203ENST00000415600 CPEB3Q8NE35 698 aaKnown RBP17.49■□□□□ 0.39
PTPRU-203ENST00000415600 SDR9C7Q8NEX9 313 aa17.49■□□□□ 0.39
PTPRU-203ENST00000415600 OR1J1Q8NGS3 322 aa17.49■□□□□ 0.39
PTPRU-203ENST00000415600 OR4K13Q8NH42 304 aa17.49■□□□□ 0.39
PTPRU-203ENST00000415600 TEAD3Q99594 435 aa17.49■□□□□ 0.39
PTPRU-203ENST00000415600 WACQ9BTA9 647 aa17.49■□□□□ 0.39
PTPRU-203ENST00000415600 ISYNA1Q9NPH2 558 aa17.49■□□□□ 0.39
PTPRU-203ENST00000415600 UGT2A1Q9Y4X1 527 aa17.49■□□□□ 0.39
PTPRU-203ENST00000415600 TIMM10BQ9Y5J6 103 aa17.49■□□□□ 0.39
PTPRU-203ENST00000415600 PLSCR5A0PG75 271 aa17.49■□□□□ 0.39
PTPRU-203ENST00000415600 AIREO43918 545 aa17.49■□□□□ 0.39
PTPRU-203ENST00000415600 TXNDC12O95881 172 aa17.49■□□□□ 0.39
PTPRU-203ENST00000415600 CST2P09228 141 aa17.49■□□□□ 0.39
PTPRU-203ENST00000415600 ZNF182P17025 639 aaPredicted RBP17.49■□□□□ 0.39
PTPRU-203ENST00000415600 ZNF32P17041 273 aa17.49■□□□□ 0.39
PTPRU-203ENST00000415600 GADD45AP24522 165 aa17.49■□□□□ 0.39
PTPRU-203ENST00000415600 CDAP32320 146 aa17.49■□□□□ 0.39
PTPRU-203ENST00000415600 ATP6V1E1P36543 226 aa17.49■□□□□ 0.39
PTPRU-203ENST00000415600 DVL1P1P54792 670 aaPredicted RBP17.49■□□□□ 0.39
PTPRU-203ENST00000415600 ERVK-25P63136 954 aa17.49■□□□□ 0.39
PTPRU-203ENST00000415600 FMODQ06828 376 aa17.49■□□□□ 0.39
PTPRU-203ENST00000415600 FAM122BQ7Z309 247 aa17.49■□□□□ 0.39
PTPRU-203ENST00000415600 GLCCI1Q86VQ1 547 aa17.49■□□□□ 0.39
PTPRU-203ENST00000415600 C1orf159Q96HA4 380 aa17.49■□□□□ 0.39
PTPRU-203ENST00000415600 DDOQ99489 341 aa17.49■□□□□ 0.39
PTPRU-203ENST00000415600 ZNF649Q9BS31 505 aa17.49■□□□□ 0.39
PTPRU-203ENST00000415600 OR51V1Q9H2C8 321 aa17.49■□□□□ 0.39
PTPRU-203ENST00000415600 CYSLTR2Q9NS75 346 aa17.49■□□□□ 0.39
PTPRU-203ENST00000415600 GRHPRQ9UBQ7 328 aa17.49■□□□□ 0.39
PTPRU-203ENST00000415600 C5orf49A4QMS7 147 aa17.48■□□□□ 0.39
PTPRU-203ENST00000415600 C12orf71A8MTZ7 269 aa17.48■□□□□ 0.39
PTPRU-203ENST00000415600 SDHAP31040 664 aa17.48■□□□□ 0.39
PTPRU-203ENST00000415600 SSX1Q16384 188 aa17.48■□□□□ 0.39
PTPRU-203ENST00000415600 SLC25A47Q6Q0C1 308 aa17.48■□□□□ 0.39
PTPRU-203ENST00000415600 PHC2Q8IXK0 858 aa17.48■□□□□ 0.39
PTPRU-203ENST00000415600 TEX29Q8N6K0 151 aa17.48■□□□□ 0.39
PTPRU-203ENST00000415600 NPEPL1Q8NDH3 523 aa17.48■□□□□ 0.39
PTPRU-203ENST00000415600 OR51G2Q8NGK0 314 aa17.48■□□□□ 0.39
PTPRU-203ENST00000415600 RPL3LQ92901 407 aaKnown RBP17.48■□□□□ 0.39
PTPRU-203ENST00000415600 ELOVL3Q9HB03 270 aa17.48■□□□□ 0.39
PTPRU-203ENST00000415600 ZNF275Q9NSD4 429 aaPredicted RBP17.48■□□□□ 0.39
PTPRU-203ENST00000415600 CGGBP1Q9UFW8 167 aaPredicted RBP17.48■□□□□ 0.39
PTPRU-203ENST00000415600 A0A1W2PPL8 197 aa17.47■□□□□ 0.39
PTPRU-203ENST00000415600 IGHV3-13P01766 116 aa17.47■□□□□ 0.39
PTPRU-203ENST00000415600 MSR1P21757 451 aa17.47■□□□□ 0.39
PTPRU-203ENST00000415600 COL8A2P25067 703 aa17.47■□□□□ 0.39
PTPRU-203ENST00000415600 IL2RGP31785 369 aa17.47■□□□□ 0.39
PTPRU-203ENST00000415600 VBP1P61758 197 aa17.47■□□□□ 0.39
PTPRU-203ENST00000415600 RPS7P62081 194 aaKnown RBP17.47■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms