RNA–Protein interactions for RNA: ENST00000414981.2

HMGB3P23-201, Transcript of high mobility group box 3 pseudogene 23, humanhuman

BASIC

Gene HMGB3P23, Length 585 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P23-201ENST00000414981 MYOZ2Q9NPC6 264 aa3.12□□□□□ -1.91
HMGB3P23-201ENST00000414981 C12orf4Q9NQ89 552 aa3.12□□□□□ -1.91
HMGB3P23-201ENST00000414981 MCUBQ9NWR8 336 aa3.12□□□□□ -1.91
HMGB3P23-201ENST00000414981 IMPAD1Q9NX62 359 aa3.12□□□□□ -1.91
HMGB3P23-201ENST00000414981 SLC2A8Q9NY64 477 aa3.12□□□□□ -1.91
HMGB3P23-201ENST00000414981 GALPQ9UBC7 116 aa3.12□□□□□ -1.91
HMGB3P23-201ENST00000414981 COPS7AQ9UBW8 275 aa3.12□□□□□ -1.91
HMGB3P23-201ENST00000414981 DUX4Q9UBX2 424 aa3.12□□□□□ -1.91
HMGB3P23-201ENST00000414981 MUTYHQ9UIF7 546 aa3.12□□□□□ -1.91
HMGB3P23-201ENST00000414981 LSM2Q9Y333 95 aaKnown RBP3.12□□□□□ -1.91
HMGB3P23-201ENST00000414981 SMAD5-AS1Q9Y6J3 95 aa3.12□□□□□ -1.91
HMGB3P23-201ENST00000414981 U3KQ87 197 aa3.12□□□□□ -1.91
HMGB3P23-201ENST00000414981 ANKRD36A6QL64 1941 aa3.12□□□□□ -1.91
HMGB3P23-201ENST00000414981 LCTP09848 1927 aa3.11□□□□□ -1.91
HMGB3P23-201ENST00000414981 A0A0G2JMP0 313 aa3.11□□□□□ -1.91
HMGB3P23-201ENST00000414981 A0A1W2PPK0 400 aa3.11□□□□□ -1.91
HMGB3P23-201ENST00000414981 A0A1W2PRG6 482 aa3.11□□□□□ -1.91
HMGB3P23-201ENST00000414981 RAB19A4D1S5 217 aa3.11□□□□□ -1.91
HMGB3P23-201ENST00000414981 RNF222A6NCQ9 220 aa3.11□□□□□ -1.91
HMGB3P23-201ENST00000414981 MGAT4DA6NG13 374 aa3.11□□□□□ -1.91
HMGB3P23-201ENST00000414981 KRTAP9-6A8MVA2 160 aa3.11□□□□□ -1.91
HMGB3P23-201ENST00000414981 C9JVG2 144 aa3.11□□□□□ -1.91
HMGB3P23-201ENST00000414981 CDC7O00311 574 aa3.11□□□□□ -1.91
HMGB3P23-201ENST00000414981 MANBAO00462 879 aa3.11□□□□□ -1.91
HMGB3P23-201ENST00000414981 KPNA3O00505 521 aaPredicted RBP3.11□□□□□ -1.91
HMGB3P23-201ENST00000414981 OR7A17O14581 309 aa3.11□□□□□ -1.91
HMGB3P23-201ENST00000414981 TOX3O15405 576 aaPredicted RBP3.11□□□□□ -1.91
HMGB3P23-201ENST00000414981 PLA2G10O15496 165 aa3.11□□□□□ -1.91
HMGB3P23-201ENST00000414981 RGS5O15539 181 aa3.11□□□□□ -1.91
HMGB3P23-201ENST00000414981 LYRM1O43325 122 aa3.11□□□□□ -1.91
HMGB3P23-201ENST00000414981 CHST10O43529 356 aa3.11□□□□□ -1.91
HMGB3P23-201ENST00000414981 SNAI2O43623 268 aa3.11□□□□□ -1.91
HMGB3P23-201ENST00000414981 TPST2O60704 377 aa3.11□□□□□ -1.91
HMGB3P23-201ENST00000414981 CRLF1O75462 422 aa3.11□□□□□ -1.91
HMGB3P23-201ENST00000414981 CLDN9O95484 217 aa3.11□□□□□ -1.91
HMGB3P23-201ENST00000414981 LALBAP00709 142 aa3.11□□□□□ -1.91
HMGB3P23-201ENST00000414981 PTHP01270 115 aa3.11□□□□□ -1.91
HMGB3P23-201ENST00000414981 LGALS2P05162 132 aa3.11□□□□□ -1.91
HMGB3P23-201ENST00000414981 CSN3P07498 182 aa3.11□□□□□ -1.91
HMGB3P23-201ENST00000414981 CSF3P09919 207 aa3.11□□□□□ -1.91
HMGB3P23-201ENST00000414981 SLC2A2P11168 524 aaPredicted RBP3.11□□□□□ -1.91
HMGB3P23-201ENST00000414981 ANXA3P12429 323 aa3.11□□□□□ -1.91
HMGB3P23-201ENST00000414981 BCKDHAP12694 445 aa3.11□□□□□ -1.91
HMGB3P23-201ENST00000414981 UGT2B7P16662 529 aa3.11□□□□□ -1.91
HMGB3P23-201ENST00000414981 ZNF7P17097 686 aaPredicted RBP3.11□□□□□ -1.91
HMGB3P23-201ENST00000414981 TSPAN8P19075 237 aa3.11□□□□□ -1.91
HMGB3P23-201ENST00000414981 RAB3AP20336 220 aa3.11□□□□□ -1.91
HMGB3P23-201ENST00000414981 ZP3P21754 424 aa3.11□□□□□ -1.91
HMGB3P23-201ENST00000414981 LHCGRP22888 699 aa3.11□□□□□ -1.91
HMGB3P23-201ENST00000414981 TEAD1P28347 426 aa3.11□□□□□ -1.91
HMGB3P23-201ENST00000414981 SLC6A1P30531 599 aa3.11□□□□□ -1.91
HMGB3P23-201ENST00000414981 CALCRP30988 508 aa3.11□□□□□ -1.91
HMGB3P23-201ENST00000414981 FEN1P39748 380 aaKnown RBP3.11□□□□□ -1.91
HMGB3P23-201ENST00000414981 CEACAM3P40198 252 aa3.11□□□□□ -1.91
HMGB3P23-201ENST00000414981 ACTR1BP42025 376 aa3.11□□□□□ -1.91
HMGB3P23-201ENST00000414981 TNFRSF4P43489 277 aa3.11□□□□□ -1.91
HMGB3P23-201ENST00000414981 EVX1P49640 407 aa3.11□□□□□ -1.91
HMGB3P23-201ENST00000414981 HMGCS2P54868 508 aa3.11□□□□□ -1.91
HMGB3P23-201ENST00000414981 AP1S2P56377 157 aa3.11□□□□□ -1.91
HMGB3P23-201ENST00000414981 B3GALT5-AS1P59052 145 aa3.11□□□□□ -1.91
HMGB3P23-201ENST00000414981 VLDLRP98155 873 aa3.11□□□□□ -1.91
HMGB3P23-201ENST00000414981 MAT1AQ00266 395 aaKnown RBP3.11□□□□□ -1.91
HMGB3P23-201ENST00000414981 PAX5Q02548 391 aa3.11□□□□□ -1.91
HMGB3P23-201ENST00000414981 TSPAN31Q12999 210 aa3.11□□□□□ -1.91
HMGB3P23-201ENST00000414981 ABRAXAS2Q15018 415 aa3.11□□□□□ -1.91
HMGB3P23-201ENST00000414981 TRAM1Q15629 374 aa3.11□□□□□ -1.91
HMGB3P23-201ENST00000414981 SSX1Q16384 188 aa3.11□□□□□ -1.91
HMGB3P23-201ENST00000414981 MRPL23Q16540 153 aaKnown RBP3.11□□□□□ -1.91
HMGB3P23-201ENST00000414981 ZNF630Q2M218 657 aaPredicted RBP3.11□□□□□ -1.91
HMGB3P23-201ENST00000414981 C5orf64Q2M2E5 130 aa3.11□□□□□ -1.91
HMGB3P23-201ENST00000414981 POM121L1PQ3SYA9 428 aa3.11□□□□□ -1.91
HMGB3P23-201ENST00000414981 GPR33Q49SQ1 333 aa3.11□□□□□ -1.91
HMGB3P23-201ENST00000414981 Q5BKY6 102 aa3.11□□□□□ -1.91
HMGB3P23-201ENST00000414981 SPANXN4Q5MJ08 99 aa3.11□□□□□ -1.91
HMGB3P23-201ENST00000414981 LIPJQ5W064 366 aa3.11□□□□□ -1.91
HMGB3P23-201ENST00000414981 TRIQKQ629K1 86 aa3.11□□□□□ -1.91
HMGB3P23-201ENST00000414981 SLC22A10Q63ZE4 541 aa3.11□□□□□ -1.91
HMGB3P23-201ENST00000414981 FRMPD2BQ6IN97 320 aa3.11□□□□□ -1.91
HMGB3P23-201ENST00000414981 FAM131AQ6UXB0 335 aa3.11□□□□□ -1.91
HMGB3P23-201ENST00000414981 FAM151BQ6UXP7 276 aa3.11□□□□□ -1.91
HMGB3P23-201ENST00000414981 BAIAP2L2Q6UXY1 529 aa3.11□□□□□ -1.91
HMGB3P23-201ENST00000414981 ZNF730Q6ZMV8 503 aa3.11□□□□□ -1.91
HMGB3P23-201ENST00000414981 Q6ZPB1 254 aaPredicted RBP3.11□□□□□ -1.91
HMGB3P23-201ENST00000414981 RPS27LQ71UM5 84 aaKnown RBP3.11□□□□□ -1.91
HMGB3P23-201ENST00000414981 ANKRD46Q86W74 232 aa3.11□□□□□ -1.91
HMGB3P23-201ENST00000414981 SLC22A15Q8IZD6 547 aa3.11□□□□□ -1.91
HMGB3P23-201ENST00000414981 SLC38A6Q8IZM9 456 aa3.11□□□□□ -1.91
HMGB3P23-201ENST00000414981 HS3ST5Q8IZT8 346 aa3.11□□□□□ -1.91
HMGB3P23-201ENST00000414981 C9orf62Q8N4C0 152 aa3.11□□□□□ -1.91
HMGB3P23-201ENST00000414981 BMPERQ8N8U9 685 aa3.11□□□□□ -1.91
HMGB3P23-201ENST00000414981 B3GNT7Q8NFL0 401 aa3.11□□□□□ -1.91
HMGB3P23-201ENST00000414981 OR2L3Q8NG85 312 aa3.11□□□□□ -1.91
HMGB3P23-201ENST00000414981 OR10G2Q8NGC3 310 aa3.11□□□□□ -1.91
HMGB3P23-201ENST00000414981 OR5D18Q8NGL1 313 aa3.11□□□□□ -1.91
HMGB3P23-201ENST00000414981 CD200R1Q8TD46 325 aa3.11□□□□□ -1.91
HMGB3P23-201ENST00000414981 PHLDA1Q8WV24 401 aaPredicted RBP3.11□□□□□ -1.91
HMGB3P23-201ENST00000414981 ZNRF4Q8WWF5 429 aa3.11□□□□□ -1.91
HMGB3P23-201ENST00000414981 GEMIN6Q8WXD5 167 aaKnown RBP3.11□□□□□ -1.91
HMGB3P23-201ENST00000414981 SLC25A36Q96CQ1 311 aa3.11□□□□□ -1.91
HMGB3P23-201ENST00000414981 OMA1Q96E52 524 aa3.11□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms