RNA–Protein interactions for RNA: ENST00000413872.6

PHRF1-202, Transcript of PHD and ring finger domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PHRF1, Length 5,224 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-202ENST00000413872 HAAOP46952 286 aa15.55■□□□□ 0.08
PHRF1-202ENST00000413872 YBX1P67809 324 aaKnown RBP15.55■□□□□ 0.08
PHRF1-202ENST00000413872 EBPQ15125 230 aaKnown RBP15.55■□□□□ 0.08
PHRF1-202ENST00000413872 OR51A4Q8NGJ6 313 aa15.55■□□□□ 0.08
PHRF1-202ENST00000413872 HES7Q9BYE0 225 aa15.55■□□□□ 0.08
PHRF1-202ENST00000413872 SMOC1Q9H4F8 434 aa15.55■□□□□ 0.08
PHRF1-202ENST00000413872 FN3KRPQ9HA64 309 aa15.55■□□□□ 0.08
PHRF1-202ENST00000413872 SLC39A9Q9NUM3 307 aa15.55■□□□□ 0.08
PHRF1-202ENST00000413872 FOXJ3Q9UPW0 622 aa15.55■□□□□ 0.08
PHRF1-202ENST00000413872 GP2P55259 537 aaKnown RBP15.55■□□□□ 0.08
PHRF1-202ENST00000413872 SLC25A26Q70HW3 274 aa15.55■□□□□ 0.08
PHRF1-202ENST00000413872 APOBEC4Q8WW27 367 aaKnown RBP15.55■□□□□ 0.08
PHRF1-202ENST00000413872 SCAF4O95104 1147 aaKnown RBP15.55■□□□□ 0.08
PHRF1-202ENST00000413872 UBE2IP63279 158 aaKnown RBP15.55■□□□□ 0.08
PHRF1-202ENST00000413872 CD276Q5ZPR3 534 aa15.55■□□□□ 0.08
PHRF1-202ENST00000413872 AMER3Q8N944 861 aa15.55■□□□□ 0.08
PHRF1-202ENST00000413872 C17orf50Q8WW18 174 aa15.55■□□□□ 0.08
PHRF1-202ENST00000413872 DLL4Q9NR61 685 aa15.55■□□□□ 0.08
PHRF1-202ENST00000413872 TNS1Q9HBL0 1735 aaKnown RBP15.55■□□□□ 0.08
PHRF1-202ENST00000413872 A0A1W2PQF6 199 aa15.55■□□□□ 0.08
PHRF1-202ENST00000413872 ST8SIA3O43173 380 aa15.55■□□□□ 0.08
PHRF1-202ENST00000413872 ATF1P18846 271 aa15.55■□□□□ 0.08
PHRF1-202ENST00000413872 SSBP1Q04837 148 aaKnown RBP15.55■□□□□ 0.08
PHRF1-202ENST00000413872 C19orf12Q9NSK7 152 aa15.55■□□□□ 0.08
PHRF1-202ENST00000413872 TAS2R5Q9NYW4 299 aa15.55■□□□□ 0.08
PHRF1-202ENST00000413872 TRAV1-2A0A0B4J238 106 aa15.54■□□□□ 0.08
PHRF1-202ENST00000413872 A0A1W2PQD3 144 aa15.54■□□□□ 0.08
PHRF1-202ENST00000413872 ZNF468Q5VIY5 522 aaPredicted RBP15.54■□□□□ 0.08
PHRF1-202ENST00000413872 AKR7LQ8NHP1 331 aa15.54■□□□□ 0.08
PHRF1-202ENST00000413872 FBXL2Q9UKC9 423 aa15.54■□□□□ 0.08
PHRF1-202ENST00000413872 LAMP3Q9UQV4 416 aa15.54■□□□□ 0.08
PHRF1-202ENST00000413872 ALOX5APP20292 161 aa15.54■□□□□ 0.08
PHRF1-202ENST00000413872 RPS27P42677 84 aaKnown RBP15.54■□□□□ 0.08
PHRF1-202ENST00000413872 CST9LP1Q5W188 147 aa15.54■□□□□ 0.08
PHRF1-202ENST00000413872 CORO2AQ92828 525 aa15.54■□□□□ 0.08
PHRF1-202ENST00000413872 DUSP1P28562 367 aa15.54■□□□□ 0.08
PHRF1-202ENST00000413872 CASP3P42574 277 aa15.54■□□□□ 0.08
PHRF1-202ENST00000413872 ZNF674Q2M3X9 581 aa15.54■□□□□ 0.08
PHRF1-202ENST00000413872 BEX5Q5H9J7 111 aa15.54■□□□□ 0.08
PHRF1-202ENST00000413872 ZNF626Q68DY1 528 aa15.54■□□□□ 0.08
PHRF1-202ENST00000413872 OR51H1Q8NH63 302 aa15.54■□□□□ 0.08
PHRF1-202ENST00000413872 LIN7CQ9NUP9 197 aaKnown RBP15.54■□□□□ 0.08
PHRF1-202ENST00000413872 OR5H15A6NDH6 313 aa15.54■□□□□ 0.08
PHRF1-202ENST00000413872 ZNF85Q03923 595 aa15.54■□□□□ 0.08
PHRF1-202ENST00000413872 FZD5Q13467 585 aa15.54■□□□□ 0.08
PHRF1-202ENST00000413872 OPCMLQ14982 345 aa15.54■□□□□ 0.08
PHRF1-202ENST00000413872 PMS2CLQ68D20 193 aa15.54■□□□□ 0.08
PHRF1-202ENST00000413872 OSR2Q8N2R0 312 aa15.54■□□□□ 0.08
PHRF1-202ENST00000413872 OR52I2Q8NH67 350 aa15.54■□□□□ 0.08
PHRF1-202ENST00000413872 CCR6P51684 374 aa15.53■□□□□ 0.08
PHRF1-202ENST00000413872 C2orf76Q3KRA6 126 aa15.53■□□□□ 0.08
PHRF1-202ENST00000413872 SMIM15Q7Z3B0 74 aa15.53■□□□□ 0.08
PHRF1-202ENST00000413872 CMTM4Q8IZR5 234 aa15.53■□□□□ 0.08
PHRF1-202ENST00000413872 GABRG1Q8N1C3 465 aa15.53■□□□□ 0.08
PHRF1-202ENST00000413872 OR2AK2Q8NG84 335 aa15.53■□□□□ 0.08
PHRF1-202ENST00000413872 HRH4Q9H3N8 390 aa15.53■□□□□ 0.08
PHRF1-202ENST00000413872 SNAPINO95295 136 aa15.53■□□□□ 0.08
PHRF1-202ENST00000413872 NKX2-1P43699 371 aaPredicted RBP15.53■□□□□ 0.08
PHRF1-202ENST00000413872 NUFIP2Q7Z417 695 aaKnown RBP15.53■□□□□ 0.08
PHRF1-202ENST00000413872 ZNF2Q9BSG1 426 aaPredicted RBP15.53■□□□□ 0.08
PHRF1-202ENST00000413872 TAF9Q16594 264 aa15.53■□□□□ 0.08
PHRF1-202ENST00000413872 C9orf152Q5JTZ5 239 aa15.53■□□□□ 0.08
PHRF1-202ENST00000413872 WDR54Q9H977 334 aa15.53■□□□□ 0.08
PHRF1-202ENST00000413872 RANGRFQ9HD47 186 aaPredicted RBP15.53■□□□□ 0.08
PHRF1-202ENST00000413872 RPS10P5Q9NQ39 176 aa15.53■□□□□ 0.08
PHRF1-202ENST00000413872 LRRC37AA6NMS7 1700 aa15.53■□□□□ 0.08
PHRF1-202ENST00000413872 QSER1Q2KHR3 1735 aa15.53■□□□□ 0.08
PHRF1-202ENST00000413872 KIAA1217Q5T5P2 1943 aa15.53■□□□□ 0.08
PHRF1-202ENST00000413872 A0A0B4J2A0 478 aa15.53■□□□□ 0.08
PHRF1-202ENST00000413872 ASPDHA6ND91 283 aa15.53■□□□□ 0.08
PHRF1-202ENST00000413872 SMIM18P0DKX4 95 aa15.53■□□□□ 0.08
PHRF1-202ENST00000413872 ADRA2CP18825 462 aa15.53■□□□□ 0.08
PHRF1-202ENST00000413872 PPP1CAP62136 330 aa15.53■□□□□ 0.08
PHRF1-202ENST00000413872 GNG3P63215 75 aa15.53■□□□□ 0.08
PHRF1-202ENST00000413872 PNLIPRP3Q17RR3 467 aa15.53■□□□□ 0.08
PHRF1-202ENST00000413872 CDC20BQ86Y33 519 aa15.53■□□□□ 0.08
PHRF1-202ENST00000413872 LYSMD2Q8IV50 215 aa15.53■□□□□ 0.08
PHRF1-202ENST00000413872 FAM109AQ8N4B1 249 aa15.53■□□□□ 0.08
PHRF1-202ENST00000413872 OR10D3Q8NH80 312 aa15.53■□□□□ 0.08
PHRF1-202ENST00000413872 SLC35E1Q96K37 410 aa15.53■□□□□ 0.08
PHRF1-202ENST00000413872 AP1S3Q96PC3 154 aa15.53■□□□□ 0.08
PHRF1-202ENST00000413872 PLAC1Q9HBJ0 212 aa15.53■□□□□ 0.08
PHRF1-202ENST00000413872 SHPKQ9UHJ6 478 aa15.53■□□□□ 0.08
PHRF1-202ENST00000413872 ST3GAL6Q9Y274 331 aa15.53■□□□□ 0.08
PHRF1-202ENST00000413872 ANKRD31Q8N7Z5 1873 aa15.53■□□□□ 0.08
PHRF1-202ENST00000413872 TPPPO94811 219 aa15.52■□□□□ 0.08
PHRF1-202ENST00000413872 UCNP55089 124 aa15.52■□□□□ 0.08
PHRF1-202ENST00000413872 BTF3L4Q96K17 158 aa15.52■□□□□ 0.08
PHRF1-202ENST00000413872 SLC6A13Q9NSD5 602 aa15.52■□□□□ 0.08
PHRF1-202ENST00000413872 PLXNB2O15031 1838 aa15.52■□□□□ 0.08
PHRF1-202ENST00000413872 TMEM235A6NFC5 223 aa15.52■□□□□ 0.08
PHRF1-202ENST00000413872 SERPINE3A8MV23 424 aa15.52■□□□□ 0.08
PHRF1-202ENST00000413872 MRPS34P82930 218 aaKnown RBP15.52■□□□□ 0.08
PHRF1-202ENST00000413872 SOWAHCQ53LP3 525 aaPredicted RBP15.52■□□□□ 0.08
PHRF1-202ENST00000413872 MRM1Q6IN84 353 aaKnown RBP15.52■□□□□ 0.08
PHRF1-202ENST00000413872 PRSS45Q7RTY3 260 aa15.52■□□□□ 0.08
PHRF1-202ENST00000413872 SLC51BQ86UW2 128 aa15.52■□□□□ 0.08
PHRF1-202ENST00000413872 FRZBQ92765 325 aa15.52■□□□□ 0.08
PHRF1-202ENST00000413872 POFUT1Q9H488 388 aa15.52■□□□□ 0.08
PHRF1-202ENST00000413872 OCIAD1Q9NX40 245 aa15.52■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms