RNA–Protein interactions for RNA: ENST00000411767.6

PTPN13-202, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN13, Length 8,119 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-202ENST00000411767 OR4X1Q8NH49 305 aa4.19□□□□□ -1.74
PTPN13-202ENST00000411767 SLC35B2Q8TB61 432 aa4.19□□□□□ -1.74
PTPN13-202ENST00000411767 BAALCQ8WXS3 180 aa4.19□□□□□ -1.74
PTPN13-202ENST00000411767 GPR146Q96CH1 333 aa4.19□□□□□ -1.74
PTPN13-202ENST00000411767 AICDAQ9GZX7 198 aa4.19□□□□□ -1.74
PTPN13-202ENST00000411767 TMEM167BQ9NRX6 74 aa4.19□□□□□ -1.74
PTPN13-202ENST00000411767 PTCH1Q13635 1447 aa4.19□□□□□ -1.74
PTPN13-202ENST00000411767 C17orf51A8MQB3 221 aa4.19□□□□□ -1.74
PTPN13-202ENST00000411767 PLPP2O43688 288 aa4.19□□□□□ -1.74
PTPN13-202ENST00000411767 TPSB2P20231 275 aa4.19□□□□□ -1.74
PTPN13-202ENST00000411767 RPL27P61353 136 aaKnown RBP4.19□□□□□ -1.74
PTPN13-202ENST00000411767 PRDX1Q06830 199 aaKnown RBP4.19□□□□□ -1.74
PTPN13-202ENST00000411767 TPSAB1Q15661 275 aa4.19□□□□□ -1.74
PTPN13-202ENST00000411767 POM121L1PQ3SYA9 428 aa4.19□□□□□ -1.74
PTPN13-202ENST00000411767 C5orf47Q569G3 176 aa4.19□□□□□ -1.74
PTPN13-202ENST00000411767 SUSD1Q6UWL2 747 aa4.19□□□□□ -1.74
PTPN13-202ENST00000411767 LYPD8Q6UX82 237 aa4.19□□□□□ -1.74
PTPN13-202ENST00000411767 DEFB106AQ8N104 65 aa4.19□□□□□ -1.74
PTPN13-202ENST00000411767 ZFPM2Q8WW38 1151 aa4.19□□□□□ -1.74
PTPN13-202ENST00000411767 TFAP2BQ92481 460 aa4.19□□□□□ -1.74
PTPN13-202ENST00000411767 PLD4Q96BZ4 506 aa4.19□□□□□ -1.74
PTPN13-202ENST00000411767 SIGMAR1Q99720 223 aa4.19□□□□□ -1.74
PTPN13-202ENST00000411767 ATXN7L1Q9ULK2 861 aaPredicted RBP4.19□□□□□ -1.74
PTPN13-202ENST00000411767 DENND4BO75064 1496 aaPredicted RBP4.19□□□□□ -1.74
PTPN13-202ENST00000411767 HSD17B6O14756 317 aa4.19□□□□□ -1.74
PTPN13-202ENST00000411767 CST4P01036 141 aa4.19□□□□□ -1.74
PTPN13-202ENST00000411767 P01737 135 aa4.19□□□□□ -1.74
PTPN13-202ENST00000411767 HOXB3P14651 431 aaPredicted RBP4.19□□□□□ -1.74
PTPN13-202ENST00000411767 NDUFB7P17568 137 aa4.19□□□□□ -1.74
PTPN13-202ENST00000411767 FPR3P25089 353 aa4.19□□□□□ -1.74
PTPN13-202ENST00000411767 ATP6V0CP27449 155 aa4.19□□□□□ -1.74
PTPN13-202ENST00000411767 SSTR2P30874 369 aa4.19□□□□□ -1.74
PTPN13-202ENST00000411767 LTC4SQ16873 150 aa4.19□□□□□ -1.74
PTPN13-202ENST00000411767 ZNF468Q5VIY5 522 aaPredicted RBP4.19□□□□□ -1.74
PTPN13-202ENST00000411767 ZNF776Q68DI1 518 aaPredicted RBP4.19□□□□□ -1.74
PTPN13-202ENST00000411767 SUMO4Q6EEV6 95 aa4.19□□□□□ -1.74
PTPN13-202ENST00000411767 CNIH2Q6PI25 160 aa4.19□□□□□ -1.74
PTPN13-202ENST00000411767 ZDHHC19Q8WVZ1 309 aaPredicted RBP4.19□□□□□ -1.74
PTPN13-202ENST00000411767 MRPL24Q96A35 216 aaKnown RBP4.19□□□□□ -1.74
PTPN13-202ENST00000411767 GPR137Q96N19 417 aa4.19□□□□□ -1.74
PTPN13-202ENST00000411767 DERL3Q96Q80 235 aa4.19□□□□□ -1.74
PTPN13-202ENST00000411767 TNFRSF13CQ96RJ3 184 aa4.19□□□□□ -1.74
PTPN13-202ENST00000411767 LHPPQ9H008 270 aa4.19□□□□□ -1.74
PTPN13-202ENST00000411767 CHST7Q9NS84 486 aa4.19□□□□□ -1.74
PTPN13-202ENST00000411767 LOXL2Q9Y4K0 774 aa4.19□□□□□ -1.74
PTPN13-202ENST00000411767 INSL6Q9Y581 213 aa4.19□□□□□ -1.74
PTPN13-202ENST00000411767 POLR1AO95602 1720 aaPredicted RBP4.19□□□□□ -1.74
PTPN13-202ENST00000411767 A0A1B0GW15 77 aa4.19□□□□□ -1.74
PTPN13-202ENST00000411767 A0A1W2PQL4 384 aaPredicted RBP4.19□□□□□ -1.74
PTPN13-202ENST00000411767 B4DEV8 164 aa4.19□□□□□ -1.74
PTPN13-202ENST00000411767 SH2D1BO14796 132 aa4.19□□□□□ -1.74
PTPN13-202ENST00000411767 HTRA2O43464 458 aaPredicted RBP4.19□□□□□ -1.74
PTPN13-202ENST00000411767 HBZP02008 142 aa4.19□□□□□ -1.74
PTPN13-202ENST00000411767 F7P08709 466 aaPredicted RBP4.19□□□□□ -1.74
PTPN13-202ENST00000411767 FGF2P09038 288 aa4.19□□□□□ -1.74
PTPN13-202ENST00000411767 ASIPP42127 132 aa4.19□□□□□ -1.74
PTPN13-202ENST00000411767 SSBP2P81877 361 aaPredicted RBP4.19□□□□□ -1.74
PTPN13-202ENST00000411767 CTF1Q16619 201 aa4.19□□□□□ -1.74
PTPN13-202ENST00000411767 ZNF766Q5HY98 468 aa4.19□□□□□ -1.74
PTPN13-202ENST00000411767 KIRREL2Q6UWL6 708 aa4.19□□□□□ -1.74
PTPN13-202ENST00000411767 TAS1R1Q7RTX1 841 aa4.19□□□□□ -1.74
PTPN13-202ENST00000411767 SERINC5Q86VE9 423 aa4.19□□□□□ -1.74
PTPN13-202ENST00000411767 CNEP1R1Q8N9A8 125 aa4.19□□□□□ -1.74
PTPN13-202ENST00000411767 OR52P1PQ8NH57 321 aa4.19□□□□□ -1.74
PTPN13-202ENST00000411767 SLC2A14Q8TDB8 520 aa4.19□□□□□ -1.74
PTPN13-202ENST00000411767 KCNS1Q96KK3 526 aa4.19□□□□□ -1.74
PTPN13-202ENST00000411767 SORT1Q99523 831 aa4.19□□□□□ -1.74
PTPN13-202ENST00000411767 TM6SF2Q9BZW4 377 aa4.19□□□□□ -1.74
PTPN13-202ENST00000411767 DMAC2Q9NW81 257 aa4.19□□□□□ -1.74
PTPN13-202ENST00000411767 CYB5R1Q9UHQ9 305 aa4.19□□□□□ -1.74
PTPN13-202ENST00000411767 A4GNTQ9UNA3 340 aa4.19□□□□□ -1.74
PTPN13-202ENST00000411767 LOC285095A0A1B0GVY8 99 aa4.19□□□□□ -1.74
PTPN13-202ENST00000411767 TMEM212A6NML5 194 aa4.19□□□□□ -1.74
PTPN13-202ENST00000411767 FCGR2AP12318 317 aa4.19□□□□□ -1.74
PTPN13-202ENST00000411767 THBS4P35443 961 aa4.19□□□□□ -1.74
PTPN13-202ENST00000411767 STC1P52823 247 aa4.19□□□□□ -1.74
PTPN13-202ENST00000411767 SUMO2P61956 95 aaKnown RBP4.19□□□□□ -1.74
PTPN13-202ENST00000411767 GAGE2BQ13066 116 aa4.19□□□□□ -1.74
PTPN13-202ENST00000411767 ATXN8Q156A1 80 aa4.19□□□□□ -1.74
PTPN13-202ENST00000411767 ZNF77Q15935 545 aa4.19□□□□□ -1.74
PTPN13-202ENST00000411767 ALKAL2Q6UX46 152 aa4.19□□□□□ -1.74
PTPN13-202ENST00000411767 PLEKHH3Q7Z736 793 aa4.19□□□□□ -1.74
PTPN13-202ENST00000411767 RPS19BP1Q86WX3 136 aaKnown RBP4.19□□□□□ -1.74
PTPN13-202ENST00000411767 PHF6Q8IWS0 365 aaKnown RBP eCLIP4.19□□□□□ -1.74
PTPN13-202ENST00000411767 EDAQ92838 391 aa4.19□□□□□ -1.74
PTPN13-202ENST00000411767 SNRNP40Q96DI7 357 aaKnown RBP4.19□□□□□ -1.74
PTPN13-202ENST00000411767 OR2A5Q96R48 311 aa4.19□□□□□ -1.74
PTPN13-202ENST00000411767 IL19Q9UHD0 177 aa4.19□□□□□ -1.74
PTPN13-202ENST00000411767 ERVV-1B6SEH8 477 aa4.19□□□□□ -1.74
PTPN13-202ENST00000411767 LEFTY1O75610 366 aa4.19□□□□□ -1.74
PTPN13-202ENST00000411767 NDUFB2O95178 105 aa4.19□□□□□ -1.74
PTPN13-202ENST00000411767 CD74P04233 296 aa4.19□□□□□ -1.74
PTPN13-202ENST00000411767 ZNF8P17098 575 aaPredicted RBP4.19□□□□□ -1.74
PTPN13-202ENST00000411767 HIST1H4AP62805 103 aaKnown RBP4.19□□□□□ -1.74
PTPN13-202ENST00000411767 SHBQ15464 509 aa4.19□□□□□ -1.74
PTPN13-202ENST00000411767 FAM74A3Q4VXF1 159 aa4.19□□□□□ -1.74
PTPN13-202ENST00000411767 EBLN2Q6P2I7 272 aa4.19□□□□□ -1.74
PTPN13-202ENST00000411767 DEFB128Q7Z7B8 93 aa4.19□□□□□ -1.74
PTPN13-202ENST00000411767 DTX2Q86UW9 622 aa4.19□□□□□ -1.74
PTPN13-202ENST00000411767 PDPNQ86YL7 162 aa4.19□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms