RNA–Protein interactions for RNA: ENST00000411527.5

HLA-DQB2-229, Transcript of major histocompatibility complex, class II, DQ beta 2, humanhuman

BASIC

Gene HLA-DQB2, Length 1,059 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2-229ENST00000411527 ENPP4Q9Y6X5 453 aa11.79□□□□□ -0.52
HLA-DQB2-229ENST00000411527 UNC119BA6NIH7 251 aa11.78□□□□□ -0.52
HLA-DQB2-229ENST00000411527 PPP1R3DO95685 299 aa11.78□□□□□ -0.52
HLA-DQB2-229ENST00000411527 TSPAN15O95858 294 aa11.78□□□□□ -0.52
HLA-DQB2-229ENST00000411527 SERPINA1P01009 418 aa11.78□□□□□ -0.52
HLA-DQB2-229ENST00000411527 H1F0P07305 194 aaKnown RBP11.78□□□□□ -0.52
HLA-DQB2-229ENST00000411527 OMPP47874 163 aa11.78□□□□□ -0.52
HLA-DQB2-229ENST00000411527 PROK1P58294 105 aa11.78□□□□□ -0.52
HLA-DQB2-229ENST00000411527 LIPEQ05469 1076 aa11.78□□□□□ -0.52
HLA-DQB2-229ENST00000411527 ECH1Q13011 328 aa11.78□□□□□ -0.52
HLA-DQB2-229ENST00000411527 FGD3Q5JSP0 725 aa11.78□□□□□ -0.52
HLA-DQB2-229ENST00000411527 SLC18B1Q6NT16 456 aa11.78□□□□□ -0.52
HLA-DQB2-229ENST00000411527 MRPL21Q7Z2W9 205 aaKnown RBP11.78□□□□□ -0.52
HLA-DQB2-229ENST00000411527 PDZD9Q8IXQ8 264 aa11.78□□□□□ -0.52
HLA-DQB2-229ENST00000411527 SLC15A3Q8IY34 581 aa11.78□□□□□ -0.52
HLA-DQB2-229ENST00000411527 OR6V1Q8N148 313 aa11.78□□□□□ -0.52
HLA-DQB2-229ENST00000411527 SLC26A10Q8NG04 563 aa11.78□□□□□ -0.52
HLA-DQB2-229ENST00000411527 OR2AJ1Q8NGZ0 328 aa11.78□□□□□ -0.52
HLA-DQB2-229ENST00000411527 FAM110DQ8TAY7 271 aaPredicted RBP11.78□□□□□ -0.52
HLA-DQB2-229ENST00000411527 RCN3Q96D15 328 aa11.78□□□□□ -0.52
HLA-DQB2-229ENST00000411527 ERMAPQ96PL5 475 aaPredicted RBP11.78□□□□□ -0.52
HLA-DQB2-229ENST00000411527 ATF6BQ99941 703 aa11.78□□□□□ -0.52
HLA-DQB2-229ENST00000411527 SLC22A4Q9H015 551 aa11.78□□□□□ -0.52
HLA-DQB2-229ENST00000411527 AP3M1Q9Y2T2 418 aa11.78□□□□□ -0.52
HLA-DQB2-229ENST00000411527 NOP16Q9Y3C1 178 aaKnown RBP11.78□□□□□ -0.52
HLA-DQB2-229ENST00000411527 TRAV38-1A0A0B4J264 116 aa11.77□□□□□ -0.53
HLA-DQB2-229ENST00000411527 A0A1W2PRQ8 180 aa11.77□□□□□ -0.53
HLA-DQB2-229ENST00000411527 CD300LBA8K4G0 201 aa11.77□□□□□ -0.53
HLA-DQB2-229ENST00000411527 NDUFA2O43678 99 aa11.77□□□□□ -0.53
HLA-DQB2-229ENST00000411527 GMDSO60547 372 aa11.77□□□□□ -0.53
HLA-DQB2-229ENST00000411527 RENP00797 406 aa11.77□□□□□ -0.53
HLA-DQB2-229ENST00000411527 GYPAP02724 150 aa11.77□□□□□ -0.53
HLA-DQB2-229ENST00000411527 TROVE2P10155 538 aaKnown RBP eCLIP11.77□□□□□ -0.53
HLA-DQB2-229ENST00000411527 TPTEP56180 551 aa11.77□□□□□ -0.53
HLA-DQB2-229ENST00000411527 TRAP1Q12931 704 aaKnown RBP11.77□□□□□ -0.53
HLA-DQB2-229ENST00000411527 DGCR6Q14129 220 aa11.77□□□□□ -0.53
HLA-DQB2-229ENST00000411527 SLC36A3Q495N2 470 aa11.77□□□□□ -0.53
HLA-DQB2-229ENST00000411527 SMARCD3Q6STE5 483 aa11.77□□□□□ -0.53
HLA-DQB2-229ENST00000411527 GDPGP1Q6ZNW5 385 aa11.77□□□□□ -0.53
HLA-DQB2-229ENST00000411527 Q6ZSV7 163 aa11.77□□□□□ -0.53
HLA-DQB2-229ENST00000411527 BTN2A1Q7KYR7 527 aa11.77□□□□□ -0.53
HLA-DQB2-229ENST00000411527 LDLRAD3Q86YD5 345 aa11.77□□□□□ -0.53
HLA-DQB2-229ENST00000411527 ZSCAN4Q8NAM6 433 aaPredicted RBP11.77□□□□□ -0.53
HLA-DQB2-229ENST00000411527 NMNAT3Q96T66 252 aa11.77□□□□□ -0.53
HLA-DQB2-229ENST00000411527 ADAT1Q9BUB4 502 aaKnown RBP11.77□□□□□ -0.53
HLA-DQB2-229ENST00000411527 DPAGT1Q9H3H5 408 aa11.77□□□□□ -0.53
HLA-DQB2-229ENST00000411527 TRIM36Q9NQ86 728 aa11.77□□□□□ -0.53
HLA-DQB2-229ENST00000411527 C1orf123Q9NWV4 160 aa11.77□□□□□ -0.53
HLA-DQB2-229ENST00000411527 FAM32AQ9Y421 112 aaKnown RBP11.77□□□□□ -0.53
HLA-DQB2-229ENST00000411527 TRBV4-1A0A0J9YWV2 114 aa11.76□□□□□ -0.53
HLA-DQB2-229ENST00000411527 OOEPA6NGQ2 149 aa11.76□□□□□ -0.53
HLA-DQB2-229ENST00000411527 DVL1O14640 695 aa11.76□□□□□ -0.53
HLA-DQB2-229ENST00000411527 OR10H3O60404 316 aa11.76□□□□□ -0.53
HLA-DQB2-229ENST00000411527 PTBP3O95758 552 aaKnown RBP11.76□□□□□ -0.53
HLA-DQB2-229ENST00000411527 HLA-DQA2P01906 255 aa11.76□□□□□ -0.53
HLA-DQB2-229ENST00000411527 GRPP07492 148 aa11.76□□□□□ -0.53
HLA-DQB2-229ENST00000411527 GGT2P36268 569 aa11.76□□□□□ -0.53
HLA-DQB2-229ENST00000411527 POU4F2Q12837 409 aa11.76□□□□□ -0.53
HLA-DQB2-229ENST00000411527 SEC23BQ15437 767 aa11.76□□□□□ -0.53
HLA-DQB2-229ENST00000411527 ZNF826PQ6ZT77 177 aa11.76□□□□□ -0.53
HLA-DQB2-229ENST00000411527 ARPINQ7Z6K5 226 aa11.76□□□□□ -0.53
HLA-DQB2-229ENST00000411527 PLPP7Q8NBV4 271 aa11.76□□□□□ -0.53
HLA-DQB2-229ENST00000411527 FAM162AQ96A26 154 aa11.76□□□□□ -0.53
HLA-DQB2-229ENST00000411527 KRCC1Q9NPI7 259 aaPredicted RBP11.76□□□□□ -0.53
HLA-DQB2-229ENST00000411527 PNRC2Q9NPJ4 139 aaKnown RBP11.76□□□□□ -0.53
HLA-DQB2-229ENST00000411527 RPRD1BQ9NQG5 326 aaKnown RBP11.76□□□□□ -0.53
HLA-DQB2-229ENST00000411527 CYB5R1Q9UHQ9 305 aa11.76□□□□□ -0.53
HLA-DQB2-229ENST00000411527 FAM96BQ9Y3D0 163 aa11.76□□□□□ -0.53
HLA-DQB2-229ENST00000411527 CAPN7Q9Y6W3 813 aa11.76□□□□□ -0.53
HLA-DQB2-229ENST00000411527 GGT3PA6NGU5 568 aa11.75□□□□□ -0.53
HLA-DQB2-229ENST00000411527 M0R135 149 aa11.75□□□□□ -0.53
HLA-DQB2-229ENST00000411527 NME4O00746 187 aa11.75□□□□□ -0.53
HLA-DQB2-229ENST00000411527 FCN3O75636 299 aa11.75□□□□□ -0.53
HLA-DQB2-229ENST00000411527 ECDO95905 644 aaPredicted RBP11.75□□□□□ -0.53
HLA-DQB2-229ENST00000411527 NCK1P16333 377 aa11.75□□□□□ -0.53
HLA-DQB2-229ENST00000411527 ZNF92Q03936 586 aa11.75□□□□□ -0.53
HLA-DQB2-229ENST00000411527 RFX4Q33E94 735 aa11.75□□□□□ -0.53
HLA-DQB2-229ENST00000411527 VMO1Q7Z5L0 202 aa11.75□□□□□ -0.53
HLA-DQB2-229ENST00000411527 FAM90A1Q86YD7 464 aa11.75□□□□□ -0.53
HLA-DQB2-229ENST00000411527 OR4K13Q8NH42 304 aa11.75□□□□□ -0.53
HLA-DQB2-229ENST00000411527 OR2AE1Q8NHA4 323 aa11.75□□□□□ -0.53
HLA-DQB2-229ENST00000411527 LRTOMTQ8WZ04 291 aa11.75□□□□□ -0.53
HLA-DQB2-229ENST00000411527 ST8SIA4Q92187 359 aa11.75□□□□□ -0.53
HLA-DQB2-229ENST00000411527 ZNF799Q96GE5 643 aa11.75□□□□□ -0.53
HLA-DQB2-229ENST00000411527 C16orf95Q9H693 158 aa11.75□□□□□ -0.53
HLA-DQB2-229ENST00000411527 CNTD2Q9H8S5 307 aa11.75□□□□□ -0.53
HLA-DQB2-229ENST00000411527 NDUFAF4Q9P032 175 aa11.75□□□□□ -0.53
HLA-DQB2-229ENST00000411527 IGHV3OR15-7A0A075B7D8 119 aa11.74□□□□□ -0.53
HLA-DQB2-229ENST00000411527 hCG_1807616A0A1W2PRN6 198 aa11.74□□□□□ -0.53
HLA-DQB2-229ENST00000411527 A6NLC8 198 aa11.74□□□□□ -0.53
HLA-DQB2-229ENST00000411527 DIRAS1O95057 198 aa11.74□□□□□ -0.53
HLA-DQB2-229ENST00000411527 HIST1H1CP16403 213 aaKnown RBP11.74□□□□□ -0.53
HLA-DQB2-229ENST00000411527 RHCEP18577 417 aa11.74□□□□□ -0.53
HLA-DQB2-229ENST00000411527 SLC6A6P31641 620 aa11.74□□□□□ -0.53
HLA-DQB2-229ENST00000411527 GSK3BP49841 420 aa11.74□□□□□ -0.53
HLA-DQB2-229ENST00000411527 SLC7A2P52569 658 aa11.74□□□□□ -0.53
HLA-DQB2-229ENST00000411527 C11orf91Q3C1V1 193 aa11.74□□□□□ -0.53
HLA-DQB2-229ENST00000411527 SNAI3Q3KNW1 292 aa11.74□□□□□ -0.53
HLA-DQB2-229ENST00000411527 CDONQ4KMG0 1287 aa11.74□□□□□ -0.53
HLA-DQB2-229ENST00000411527 DHRS7BQ6IAN0 325 aaPredicted RBP11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms