RNA–Protein interactions for RNA: ENST00000411423.1

SF3A1-202, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 4

Gene SF3A1, Length 548 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-202ENST00000411423 GSTT1P30711 240 aa16.02■□□□□ 0.16
SF3A1-202ENST00000411423 BTG1P62324 171 aa16.02■□□□□ 0.16
SF3A1-202ENST00000411423 LCN2P80188 198 aa16.02■□□□□ 0.16
SF3A1-202ENST00000411423 FAM201AQ5SY85 155 aa16.02■□□□□ 0.16
SF3A1-202ENST00000411423 FAHD2BQ6P2I3 314 aaPredicted RBP16.02■□□□□ 0.16
SF3A1-202ENST00000411423 FAHD1Q6P587 224 aa16.02■□□□□ 0.16
SF3A1-202ENST00000411423 DRAM2Q6UX65 266 aa16.02■□□□□ 0.16
SF3A1-202ENST00000411423 PGAP1Q75T13 922 aa16.02■□□□□ 0.16
SF3A1-202ENST00000411423 PRSS45Q7RTY3 260 aa16.02■□□□□ 0.16
SF3A1-202ENST00000411423 MOGAT3Q86VF5 341 aa16.02■□□□□ 0.16
SF3A1-202ENST00000411423 LRRC28Q86X40 367 aaPredicted RBP16.02■□□□□ 0.16
SF3A1-202ENST00000411423 DVL3Q92997 716 aaPredicted RBP16.02■□□□□ 0.16
SF3A1-202ENST00000411423 FAHD2AQ96GK7 314 aa16.02■□□□□ 0.16
SF3A1-202ENST00000411423 INTS14Q96SY0 518 aa16.02■□□□□ 0.16
SF3A1-202ENST00000411423 REPIN1Q9BWE0 567 aaKnown RBP16.02■□□□□ 0.16
SF3A1-202ENST00000411423 ZNF319Q9P2F9 582 aa16.02■□□□□ 0.16
SF3A1-202ENST00000411423 KLHDC2Q9Y2U9 406 aa16.02■□□□□ 0.16
SF3A1-202ENST00000411423 N6AMT1Q9Y5N5 214 aa16.02■□□□□ 0.16
SF3A1-202ENST00000411423 CD300LBA8K4G0 201 aa16.01■□□□□ 0.15
SF3A1-202ENST00000411423 HOXB6P17509 224 aaKnown RBP16.01■□□□□ 0.15
SF3A1-202ENST00000411423 SLC2A5P22732 501 aa16.01■□□□□ 0.15
SF3A1-202ENST00000411423 SRP14P37108 136 aaKnown RBP16.01■□□□□ 0.15
SF3A1-202ENST00000411423 RAD23AP54725 363 aa16.01■□□□□ 0.15
SF3A1-202ENST00000411423 MALLQ13021 153 aa16.01■□□□□ 0.15
SF3A1-202ENST00000411423 PRAMEF6Q5VXH4 476 aa16.01■□□□□ 0.15
SF3A1-202ENST00000411423 MRPL21Q7Z2W9 205 aaKnown RBP16.01■□□□□ 0.15
SF3A1-202ENST00000411423 CPOQ8IVL8 374 aa16.01■□□□□ 0.15
SF3A1-202ENST00000411423 RNF133Q8WVZ7 376 aa16.01■□□□□ 0.15
SF3A1-202ENST00000411423 YY1AP1Q9H869 796 aa16.01■□□□□ 0.15
SF3A1-202ENST00000411423 PATZ1Q9HBE1 687 aaKnown RBP16.01■□□□□ 0.15
SF3A1-202ENST00000411423 SLC25A19Q9HC21 320 aa16.01■□□□□ 0.15
SF3A1-202ENST00000411423 LOC105371242A0A075B767 164 aa16■□□□□ 0.15
SF3A1-202ENST00000411423 PRR23D1E9PI22 279 aaPredicted RBP16■□□□□ 0.15
SF3A1-202ENST00000411423 F5H0A9 414 aaPredicted RBP16■□□□□ 0.15
SF3A1-202ENST00000411423 MITFO75030 526 aaPredicted RBP16■□□□□ 0.15
SF3A1-202ENST00000411423 PNPP00491 289 aa16■□□□□ 0.15
SF3A1-202ENST00000411423 PRR23D2P0DMB1 279 aaPredicted RBP16■□□□□ 0.15
SF3A1-202ENST00000411423 CA6P23280 308 aa16■□□□□ 0.15
SF3A1-202ENST00000411423 CX3CR1P49238 355 aa16■□□□□ 0.15
SF3A1-202ENST00000411423 MPPED2Q15777 294 aa16■□□□□ 0.15
SF3A1-202ENST00000411423 TMEM155Q4W5P6 130 aa16■□□□□ 0.15
SF3A1-202ENST00000411423 PEG10Q86TG7 708 aaKnown RBP16■□□□□ 0.15
SF3A1-202ENST00000411423 METTL17Q9H7H0 456 aaPredicted RBP16■□□□□ 0.15
SF3A1-202ENST00000411423 ZNF556Q9HAH1 456 aa16■□□□□ 0.15
SF3A1-202ENST00000411423 OPN4Q9UHM6 478 aa16■□□□□ 0.15
SF3A1-202ENST00000411423 M0R129 80 aa15.99■□□□□ 0.15
SF3A1-202ENST00000411423 ANPEPP15144 967 aa15.99■□□□□ 0.15
SF3A1-202ENST00000411423 ADRA2CP18825 462 aa15.99■□□□□ 0.15
SF3A1-202ENST00000411423 EPHA2P29317 976 aa15.99■□□□□ 0.15
SF3A1-202ENST00000411423 OPRL1P41146 370 aa15.99■□□□□ 0.15
SF3A1-202ENST00000411423 CD200P41217 278 aa15.99■□□□□ 0.15
SF3A1-202ENST00000411423 SRP9P49458 86 aaKnown RBP15.99■□□□□ 0.15
SF3A1-202ENST00000411423 BLVRAP53004 296 aa15.99■□□□□ 0.15
SF3A1-202ENST00000411423 HCCSP53701 268 aa15.99■□□□□ 0.15
SF3A1-202ENST00000411423 TAF13Q15543 124 aa15.99■□□□□ 0.15
SF3A1-202ENST00000411423 KLHL12Q53G59 568 aa15.99■□□□□ 0.15
SF3A1-202ENST00000411423 C19orf18Q8NEA5 215 aa15.99■□□□□ 0.15
SF3A1-202ENST00000411423 OR56B2PQ8NGI1 322 aa15.99■□□□□ 0.15
SF3A1-202ENST00000411423 OR5K1Q8NHB7 308 aa15.99■□□□□ 0.15
SF3A1-202ENST00000411423 SPSB4Q96A44 273 aa15.99■□□□□ 0.15
SF3A1-202ENST00000411423 NRBF2Q96F24 287 aa15.99■□□□□ 0.15
SF3A1-202ENST00000411423 PPP1R3EQ9H7J1 279 aa15.99■□□□□ 0.15
SF3A1-202ENST00000411423 TMEM165Q9HC07 324 aa15.99■□□□□ 0.15
SF3A1-202ENST00000411423 MMP26Q9NRE1 261 aa15.99■□□□□ 0.15
SF3A1-202ENST00000411423 PAPOLBQ9NRJ5 636 aaKnown RBP15.99■□□□□ 0.15
SF3A1-202ENST00000411423 DNAJC27Q9NZQ0 273 aa15.99■□□□□ 0.15
SF3A1-202ENST00000411423 CCDC182A6NF36 153 aa15.98■□□□□ 0.15
SF3A1-202ENST00000411423 CEACAM18A8MTB9 384 aa15.98■□□□□ 0.15
SF3A1-202ENST00000411423 TRAPPC2LH3BP13 241 aa15.98■□□□□ 0.15
SF3A1-202ENST00000411423 HMGN1P05114 100 aa15.98■□□□□ 0.15
SF3A1-202ENST00000411423 PCMT1P22061 227 aa15.98■□□□□ 0.15
SF3A1-202ENST00000411423 NAA10P41227 235 aaPredicted RBP15.98■□□□□ 0.15
SF3A1-202ENST00000411423 GATA4P43694 442 aa15.98■□□□□ 0.15
SF3A1-202ENST00000411423 CRISP1P54107 249 aa15.98■□□□□ 0.15
SF3A1-202ENST00000411423 ATP6AP1Q15904 470 aa15.98■□□□□ 0.15
SF3A1-202ENST00000411423 AMIGO2Q86SJ2 522 aa15.98■□□□□ 0.15
SF3A1-202ENST00000411423 SPATA3Q8NHX4 192 aa15.98■□□□□ 0.15
SF3A1-202ENST00000411423 SPRYD4Q8WW59 207 aaPredicted RBP15.98■□□□□ 0.15
SF3A1-202ENST00000411423 SGK3Q96BR1 496 aa15.98■□□□□ 0.15
SF3A1-202ENST00000411423 TVP23BQ9NYZ1 205 aa15.98■□□□□ 0.15
SF3A1-202ENST00000411423 GGT3PA6NGU5 568 aa15.97■□□□□ 0.15
SF3A1-202ENST00000411423 FAM20BO75063 409 aa15.97■□□□□ 0.15
SF3A1-202ENST00000411423 PAICSP22234 425 aaKnown RBP15.97■□□□□ 0.15
SF3A1-202ENST00000411423 ZNF121P58317 390 aaPredicted RBP15.97■□□□□ 0.15
SF3A1-202ENST00000411423 GRB2P62993 217 aaKnown RBP15.97■□□□□ 0.15
SF3A1-202ENST00000411423 FAM3AP98173 230 aa15.97■□□□□ 0.15
SF3A1-202ENST00000411423 PTGES3Q15185 160 aaKnown RBP15.97■□□□□ 0.15
SF3A1-202ENST00000411423 OR8G1Q15617 311 aa15.97■□□□□ 0.15
SF3A1-202ENST00000411423 ZNF181Q2M3W8 571 aa15.97■□□□□ 0.15
SF3A1-202ENST00000411423 DCAF12L2Q5VW00 463 aa15.97■□□□□ 0.15
SF3A1-202ENST00000411423 FAM57BQ71RH2 274 aa15.97■□□□□ 0.15
SF3A1-202ENST00000411423 BCDIN3DQ7Z5W3 292 aaKnown RBP15.97■□□□□ 0.15
SF3A1-202ENST00000411423 SPICQ8N5J4 248 aa15.97■□□□□ 0.15
SF3A1-202ENST00000411423 OTOSQ8NHW6 89 aa15.97■□□□□ 0.15
SF3A1-202ENST00000411423 LRTOMTQ8WZ04 291 aa15.97■□□□□ 0.15
SF3A1-202ENST00000411423 TMEM158Q8WZ71 300 aa15.97■□□□□ 0.15
SF3A1-202ENST00000411423 DUS3LQ96G46 650 aaKnown RBP15.97■□□□□ 0.15
SF3A1-202ENST00000411423 TMEM246Q9BRR3 403 aa15.97■□□□□ 0.15
SF3A1-202ENST00000411423 ADAT1Q9BUB4 502 aaKnown RBP15.97■□□□□ 0.15
SF3A1-202ENST00000411423 UFSP2Q9NUQ7 469 aa15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms