RNA–Protein interactions for RNA: ENST00000410093.5

LIMS1-205, Transcript of LIM zinc finger domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene LIMS1, Length 1,526 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-205ENST00000410093 PHF3Q92576 2039 aaKnown RBP11.99□□□□□ -0.49
LIMS1-205ENST00000410093 MEIKINA0A087WXM9 373 aa11.98□□□□□ -0.49
LIMS1-205ENST00000410093 TERTO14746 1132 aaKnown RBP11.98□□□□□ -0.49
LIMS1-205ENST00000410093 DOK2O60496 412 aa11.98□□□□□ -0.49
LIMS1-205ENST00000410093 RAD1O60671 282 aa11.98□□□□□ -0.49
LIMS1-205ENST00000410093 RAMP1O60894 148 aa11.98□□□□□ -0.49
LIMS1-205ENST00000410093 MTRF1O75570 445 aaKnown RBP11.98□□□□□ -0.49
LIMS1-205ENST00000410093 IGLV3-1P01715 115 aa11.98□□□□□ -0.49
LIMS1-205ENST00000410093 OPN1LWP04000 364 aa11.98□□□□□ -0.49
LIMS1-205ENST00000410093 TBPP20226 339 aa11.98□□□□□ -0.49
LIMS1-205ENST00000410093 CD82P27701 267 aa11.98□□□□□ -0.49
LIMS1-205ENST00000410093 DLSTP36957 453 aa11.98□□□□□ -0.49
LIMS1-205ENST00000410093 EIF1AXP47813 144 aaKnown RBP11.98□□□□□ -0.49
LIMS1-205ENST00000410093 ZNF121P58317 390 aaPredicted RBP11.98□□□□□ -0.49
LIMS1-205ENST00000410093 IFITM2Q01629 132 aa11.98□□□□□ -0.49
LIMS1-205ENST00000410093 SPOCK1Q08629 439 aa11.98□□□□□ -0.49
LIMS1-205ENST00000410093 AIMP2Q13155 320 aaKnown RBP11.98□□□□□ -0.49
LIMS1-205ENST00000410093 MFAP5Q13361 173 aa11.98□□□□□ -0.49
LIMS1-205ENST00000410093 CAMK2BQ13554 666 aa11.98□□□□□ -0.49
LIMS1-205ENST00000410093 FCN2Q15485 313 aa11.98□□□□□ -0.49
LIMS1-205ENST00000410093 SGCAQ16586 387 aa11.98□□□□□ -0.49
LIMS1-205ENST00000410093 ABHD17BQ5VST6 288 aa11.98□□□□□ -0.49
LIMS1-205ENST00000410093 OTPQ5XKR4 325 aa11.98□□□□□ -0.49
LIMS1-205ENST00000410093 GLDNQ6ZMI3 551 aaPredicted RBP11.98□□□□□ -0.49
LIMS1-205ENST00000410093 SPICQ8N5J4 248 aa11.98□□□□□ -0.49
LIMS1-205ENST00000410093 ZNF283Q8N7M2 679 aa11.98□□□□□ -0.49
LIMS1-205ENST00000410093 OR52H1Q8NGJ2 320 aa11.98□□□□□ -0.49
LIMS1-205ENST00000410093 OR1J2Q8NGS2 313 aa11.98□□□□□ -0.49
LIMS1-205ENST00000410093 OR2V1Q8NHB1 315 aa11.98□□□□□ -0.49
LIMS1-205ENST00000410093 PSMF1Q92530 271 aa11.98□□□□□ -0.49
LIMS1-205ENST00000410093 RELTQ969Z4 430 aa11.98□□□□□ -0.49
LIMS1-205ENST00000410093 CPNE2Q96FN4 548 aaPredicted RBP11.98□□□□□ -0.49
LIMS1-205ENST00000410093 SFXN2Q96NB2 322 aa11.98□□□□□ -0.49
LIMS1-205ENST00000410093 SLC25A21Q9BQT8 299 aaPredicted RBP11.98□□□□□ -0.49
LIMS1-205ENST00000410093 ULBP2Q9BZM5 246 aa11.98□□□□□ -0.49
LIMS1-205ENST00000410093 ALX4Q9H161 411 aaPredicted RBP11.98□□□□□ -0.49
LIMS1-205ENST00000410093 NPTNQ9Y639 398 aa11.98□□□□□ -0.49
LIMS1-205ENST00000410093 OR6C65A6NJZ3 312 aa11.97□□□□□ -0.49
LIMS1-205ENST00000410093 TNFSF11O14788 317 aa11.97□□□□□ -0.49
LIMS1-205ENST00000410093 SSNA1O43805 119 aa11.97□□□□□ -0.49
LIMS1-205ENST00000410093 CREBL2O60519 120 aaPredicted RBP11.97□□□□□ -0.49
LIMS1-205ENST00000410093 GMDSO60547 372 aa11.97□□□□□ -0.49
LIMS1-205ENST00000410093 CST2P09228 141 aa11.97□□□□□ -0.49
LIMS1-205ENST00000410093 TMIGD3P0DMS9 266 aaPredicted RBP11.97□□□□□ -0.49
LIMS1-205ENST00000410093 S100A1P23297 94 aa11.97□□□□□ -0.49
LIMS1-205ENST00000410093 OTX1P32242 354 aaPredicted RBP11.97□□□□□ -0.49
LIMS1-205ENST00000410093 CDAP32320 146 aa11.97□□□□□ -0.49
LIMS1-205ENST00000410093 THBS4P35443 961 aa11.97□□□□□ -0.49
LIMS1-205ENST00000410093 ZNF93P35789 620 aaPredicted RBP11.97□□□□□ -0.49
LIMS1-205ENST00000410093 EFNB2P52799 333 aa11.97□□□□□ -0.49
LIMS1-205ENST00000410093 PCBD1P61457 104 aa11.97□□□□□ -0.49
LIMS1-205ENST00000410093 MEF2DQ14814 521 aa11.97□□□□□ -0.49
LIMS1-205ENST00000410093 ZNF468Q5VIY5 522 aaPredicted RBP11.97□□□□□ -0.49
LIMS1-205ENST00000410093 SFRP4Q6FHJ7 346 aaPredicted RBP11.97□□□□□ -0.49
LIMS1-205ENST00000410093 ABLIM2Q6H8Q1 611 aa11.97□□□□□ -0.49
LIMS1-205ENST00000410093 ZNF782Q6ZMW2 699 aaPredicted RBP11.97□□□□□ -0.49
LIMS1-205ENST00000410093 GGNQ86UU5 652 aa11.97□□□□□ -0.49
LIMS1-205ENST00000410093 GPR137CQ8N3F9 429 aa11.97□□□□□ -0.49
LIMS1-205ENST00000410093 CLEC1AQ8NC01 280 aa11.97□□□□□ -0.49
LIMS1-205ENST00000410093 OR8B12Q8NGG6 310 aa11.97□□□□□ -0.49
LIMS1-205ENST00000410093 CCDC107Q8WV48 283 aa11.97□□□□□ -0.49
LIMS1-205ENST00000410093 PP6455Q8WZ26 134 aa11.97□□□□□ -0.49
LIMS1-205ENST00000410093 TMEM45BQ96B21 275 aa11.97□□□□□ -0.49
LIMS1-205ENST00000410093 FER1L6-AS2Q96M78 137 aa11.97□□□□□ -0.49
LIMS1-205ENST00000410093 ZNF416Q9BWM5 594 aa11.97□□□□□ -0.49
LIMS1-205ENST00000410093 MYOZ1Q9NP98 299 aaPredicted RBP11.97□□□□□ -0.49
LIMS1-205ENST00000410093 LRFN1Q9P244 771 aa11.97□□□□□ -0.49
LIMS1-205ENST00000410093 SCP2D1Q9UJQ7 156 aa11.97□□□□□ -0.49
LIMS1-205ENST00000410093 RHBDD3Q9Y3P4 386 aa11.97□□□□□ -0.49
LIMS1-205ENST00000410093 UBE2QL1A1L167 161 aa11.96□□□□□ -0.49
LIMS1-205ENST00000410093 LRRC3CA6NJW4 275 aa11.96□□□□□ -0.49
LIMS1-205ENST00000410093 SMAD9O15198 467 aaKnown RBP11.96□□□□□ -0.49
LIMS1-205ENST00000410093 RER1O15258 196 aa11.96□□□□□ -0.49
LIMS1-205ENST00000410093 CYB5AP00167 134 aa11.96□□□□□ -0.49
LIMS1-205ENST00000410093 GTF2F2P13984 249 aa11.96□□□□□ -0.49
LIMS1-205ENST00000410093 C4BPBP20851 252 aa11.96□□□□□ -0.49
LIMS1-205ENST00000410093 MPZP25189 248 aa11.96□□□□□ -0.49
LIMS1-205ENST00000410093 ALDH3B1P43353 468 aa11.96□□□□□ -0.49
LIMS1-205ENST00000410093 RPS18P62269 152 aaKnown RBP11.96□□□□□ -0.49
LIMS1-205ENST00000410093 OC90Q02509 493 aaPredicted RBP11.96□□□□□ -0.49
LIMS1-205ENST00000410093 SCRN3Q0VDG4 424 aa11.96□□□□□ -0.49
LIMS1-205ENST00000410093 PMPCAQ10713 525 aa11.96□□□□□ -0.49
LIMS1-205ENST00000410093 ENDOGQ14249 297 aaKnown RBP11.96□□□□□ -0.49
LIMS1-205ENST00000410093 ARL6IP1Q15041 203 aa11.96□□□□□ -0.49
LIMS1-205ENST00000410093 STEAP1BQ6NZ63 245 aa11.96□□□□□ -0.49
LIMS1-205ENST00000410093 UTS2BQ765I0 119 aa11.96□□□□□ -0.49
LIMS1-205ENST00000410093 ABHD12BQ7Z5M8 362 aaPredicted RBP11.96□□□□□ -0.49
LIMS1-205ENST00000410093 ZIC4Q8N9L1 334 aa11.96□□□□□ -0.49
LIMS1-205ENST00000410093 PNLDC1Q8NA58 520 aaKnown RBP11.96□□□□□ -0.49
LIMS1-205ENST00000410093 OR51A2Q8NGJ7 313 aa11.96□□□□□ -0.49
LIMS1-205ENST00000410093 KCNG3Q8TAE7 436 aa11.96□□□□□ -0.49
LIMS1-205ENST00000410093 OR51E1Q8TCB6 317 aa11.96□□□□□ -0.49
LIMS1-205ENST00000410093 NABP1Q96AH0 204 aa11.96□□□□□ -0.49
LIMS1-205ENST00000410093 SEH1LQ96EE3 360 aa11.96□□□□□ -0.49
LIMS1-205ENST00000410093 PGAM5Q96HS1 289 aa11.96□□□□□ -0.49
LIMS1-205ENST00000410093 THOC3Q96J01 351 aaKnown RBP11.96□□□□□ -0.49
LIMS1-205ENST00000410093 ADGRG7Q96K78 797 aa11.96□□□□□ -0.49
LIMS1-205ENST00000410093 ZNF385AQ96PM9 386 aaKnown RBP11.96□□□□□ -0.49
LIMS1-205ENST00000410093 TMEM246Q9BRR3 403 aa11.96□□□□□ -0.49
LIMS1-205ENST00000410093 BEX2Q9BXY8 128 aa11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms