RNA–Protein interactions for RNA: ENST00000409531.5

TSPAN4-208, Transcript of tetraspanin 4, humanhuman

TSL 5 BASIC

Gene TSPAN4, Length 1,339 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-208ENST00000409531 PSMB10P40306 273 aa14.24□□□□□ -0.13
TSPAN4-208ENST00000409531 WNT5AP41221 380 aa14.24□□□□□ -0.13
TSPAN4-208ENST00000409531 MAP2K4P45985 399 aa14.24□□□□□ -0.13
TSPAN4-208ENST00000409531 CCR9P51686 369 aa14.24□□□□□ -0.13
TSPAN4-208ENST00000409531 HGFACQ04756 655 aa14.24□□□□□ -0.13
TSPAN4-208ENST00000409531 MALLQ13021 153 aa14.24□□□□□ -0.13
TSPAN4-208ENST00000409531 BCL2L15Q5TBC7 163 aa14.24□□□□□ -0.13
TSPAN4-208ENST00000409531 RPL22L1Q6P5R6 122 aaKnown RBP14.24□□□□□ -0.13
TSPAN4-208ENST00000409531 PAMR1Q6UXH9 720 aa14.24□□□□□ -0.13
TSPAN4-208ENST00000409531 FAM57BQ71RH2 274 aa14.24□□□□□ -0.13
TSPAN4-208ENST00000409531 PRSS45Q7RTY3 260 aa14.24□□□□□ -0.13
TSPAN4-208ENST00000409531 CATSPERDQ86XM0 798 aa14.24□□□□□ -0.13
TSPAN4-208ENST00000409531 ABHD4Q8TB40 342 aa14.24□□□□□ -0.13
TSPAN4-208ENST00000409531 OR10A2Q9H208 303 aa14.24□□□□□ -0.13
TSPAN4-208ENST00000409531 ISYNA1Q9NPH2 558 aa14.24□□□□□ -0.13
TSPAN4-208ENST00000409531 ZNF391Q9UJN7 358 aa14.24□□□□□ -0.13
TSPAN4-208ENST00000409531 POU2F3Q9UKI9 436 aa14.24□□□□□ -0.13
TSPAN4-208ENST00000409531 OR52A1Q9UKL2 312 aa14.24□□□□□ -0.13
TSPAN4-208ENST00000409531 PLEKHA6Q9Y2H5 1048 aa14.24□□□□□ -0.13
TSPAN4-208ENST00000409531 ROS1P08922 2347 aa14.24□□□□□ -0.13
TSPAN4-208ENST00000409531 OTOGQ6ZRI0 2925 aa14.24□□□□□ -0.13
TSPAN4-208ENST00000409531 ATP6V1G2-DDX39BF2Z307 99 aa14.23□□□□□ -0.13
TSPAN4-208ENST00000409531 TBX1O43435 398 aa14.23□□□□□ -0.13
TSPAN4-208ENST00000409531 SMPD2O60906 423 aa14.23□□□□□ -0.13
TSPAN4-208ENST00000409531 PNPP00491 289 aa14.23□□□□□ -0.13
TSPAN4-208ENST00000409531 RAF1P04049 648 aa14.23□□□□□ -0.13
TSPAN4-208ENST00000409531 FAM157BP0CG42 384 aa14.23□□□□□ -0.13
TSPAN4-208ENST00000409531 SLC2A1P11166 492 aa14.23□□□□□ -0.13
TSPAN4-208ENST00000409531 ATP6V1B1P15313 513 aa14.23□□□□□ -0.13
TSPAN4-208ENST00000409531 PCMT1P22061 227 aa14.23□□□□□ -0.13
TSPAN4-208ENST00000409531 CFL1P23528 166 aaKnown RBP14.23□□□□□ -0.13
TSPAN4-208ENST00000409531 MFGE8Q08431 387 aaPredicted RBP14.23□□□□□ -0.13
TSPAN4-208ENST00000409531 SNTB2Q13425 540 aaKnown RBP14.23□□□□□ -0.13
TSPAN4-208ENST00000409531 ALKBH1Q13686 389 aaKnown RBP14.23□□□□□ -0.13
TSPAN4-208ENST00000409531 UBE2UQ5VVX9 321 aa14.23□□□□□ -0.13
TSPAN4-208ENST00000409531 NAA40Q86UY6 237 aa14.23□□□□□ -0.13
TSPAN4-208ENST00000409531 ZNF101Q8IZC7 436 aa14.23□□□□□ -0.13
TSPAN4-208ENST00000409531 NUP37Q8NFH4 326 aa14.23□□□□□ -0.13
TSPAN4-208ENST00000409531 OR2G2Q8NGZ5 317 aa14.23□□□□□ -0.13
TSPAN4-208ENST00000409531 OR5M11Q96RB7 305 aa14.23□□□□□ -0.13
TSPAN4-208ENST00000409531 TMEM204Q9BSN7 226 aa14.23□□□□□ -0.13
TSPAN4-208ENST00000409531 MRPS26Q9BYN8 205 aaKnown RBP14.23□□□□□ -0.13
TSPAN4-208ENST00000409531 PBOV1Q9GZY1 135 aa14.23□□□□□ -0.13
TSPAN4-208ENST00000409531 RGCCQ9H4X1 137 aa14.23□□□□□ -0.13
TSPAN4-208ENST00000409531 OPA3Q9H6K4 179 aa14.23□□□□□ -0.13
TSPAN4-208ENST00000409531 G6PC2Q9NQR9 355 aa14.23□□□□□ -0.13
TSPAN4-208ENST00000409531 N6AMT1Q9Y5N5 214 aa14.23□□□□□ -0.13
TSPAN4-208ENST00000409531 TRBV2A0A0J9YWF9 115 aa14.22□□□□□ -0.13
TSPAN4-208ENST00000409531 A0A0U1RQV5 110 aa14.22□□□□□ -0.13
TSPAN4-208ENST00000409531 TRIM64CA6NLI5 447 aa14.22□□□□□ -0.13
TSPAN4-208ENST00000409531 VSTM5A8MXK1 200 aa14.22□□□□□ -0.13
TSPAN4-208ENST00000409531 NGFP01138 241 aa14.22□□□□□ -0.13
TSPAN4-208ENST00000409531 LCKP06239 509 aa14.22□□□□□ -0.13
TSPAN4-208ENST00000409531 HSMCR30P0CW71 290 aa14.22□□□□□ -0.13
TSPAN4-208ENST00000409531 PPP1CBP62140 327 aa14.22□□□□□ -0.13
TSPAN4-208ENST00000409531 SPOCK1Q08629 439 aa14.22□□□□□ -0.13
TSPAN4-208ENST00000409531 MLLT11Q13015 90 aaPredicted RBP14.22□□□□□ -0.13
TSPAN4-208ENST00000409531 CDK5R1Q15078 307 aa14.22□□□□□ -0.13
TSPAN4-208ENST00000409531 TIGD6Q17RP2 521 aa14.22□□□□□ -0.13
TSPAN4-208ENST00000409531 ADAM5Q6NVV9 412 aa14.22□□□□□ -0.13
TSPAN4-208ENST00000409531 ZNF704Q6ZNC4 412 aaPredicted RBP14.22□□□□□ -0.13
TSPAN4-208ENST00000409531 KCTD8Q6ZWB6 473 aa14.22□□□□□ -0.13
TSPAN4-208ENST00000409531 RFPL4BQ6ZWI9 263 aa14.22□□□□□ -0.13
TSPAN4-208ENST00000409531 ELMOD2Q8IZ81 293 aa14.22□□□□□ -0.13
TSPAN4-208ENST00000409531 OR1J1Q8NGS3 322 aa14.22□□□□□ -0.13
TSPAN4-208ENST00000409531 COMMD4Q9H0A8 199 aa14.22□□□□□ -0.13
TSPAN4-208ENST00000409531 ATP23Q9Y6H3 246 aa14.22□□□□□ -0.13
TSPAN4-208ENST00000409531 TMEM212A6NML5 194 aa14.21□□□□□ -0.13
TSPAN4-208ENST00000409531 E9PI62 339 aa14.21□□□□□ -0.13
TSPAN4-208ENST00000409531 H3BSA7 217 aa14.21□□□□□ -0.13
TSPAN4-208ENST00000409531 OGG1O15527 345 aa14.21□□□□□ -0.13
TSPAN4-208ENST00000409531 ATE1O95260 518 aa14.21□□□□□ -0.13
TSPAN4-208ENST00000409531 PLAUP00749 431 aa14.21□□□□□ -0.13
TSPAN4-208ENST00000409531 UBCP0CG48 685 aaKnown RBP14.21□□□□□ -0.13
TSPAN4-208ENST00000409531 GLRXP35754 106 aa14.21□□□□□ -0.13
TSPAN4-208ENST00000409531 GTF2A1P52655 376 aaPredicted RBP14.21□□□□□ -0.13
TSPAN4-208ENST00000409531 NKX6-1P78426 367 aaPredicted RBP14.21□□□□□ -0.13
TSPAN4-208ENST00000409531 GPR50Q13585 617 aa14.21□□□□□ -0.13
TSPAN4-208ENST00000409531 TESK1Q15569 626 aa14.21□□□□□ -0.13
TSPAN4-208ENST00000409531 SNAI3Q3KNW1 292 aa14.21□□□□□ -0.13
TSPAN4-208ENST00000409531 WDR38Q5JTN6 314 aa14.21□□□□□ -0.13
TSPAN4-208ENST00000409531 RGS7BPQ6MZT1 257 aaPredicted RBP14.21□□□□□ -0.13
TSPAN4-208ENST00000409531 OR8B12Q8NGG6 310 aa14.21□□□□□ -0.13
TSPAN4-208ENST00000409531 AKAP1Q92667 903 aaKnown RBP eCLIP14.21□□□□□ -0.137e-7■■■■□ 20.3
TSPAN4-208ENST00000409531 ITFG2Q969R8 447 aa14.21□□□□□ -0.13
TSPAN4-208ENST00000409531 RNF166Q96A37 237 aaPredicted RBP14.21□□□□□ -0.13
TSPAN4-208ENST00000409531 MBD6Q96DN6 1003 aa14.21□□□□□ -0.13
TSPAN4-208ENST00000409531 SMIM19Q96E16 107 aa14.21□□□□□ -0.13
TSPAN4-208ENST00000409531 MGLLQ99685 303 aa14.21□□□□□ -0.13
TSPAN4-208ENST00000409531 OR51B6Q9H340 312 aa14.21□□□□□ -0.13
TSPAN4-208ENST00000409531 FRRS1LQ9P0K9 344 aa14.21□□□□□ -0.13
TSPAN4-208ENST00000409531 STARD10Q9Y365 291 aa14.21□□□□□ -0.13
TSPAN4-208ENST00000409531 SHISA9B4DS77 424 aa14.2□□□□□ -0.14
TSPAN4-208ENST00000409531 PLPP2O43688 288 aa14.2□□□□□ -0.14
TSPAN4-208ENST00000409531 CLPTM1O96005 669 aa14.2□□□□□ -0.14
TSPAN4-208ENST00000409531 LALBAP00709 142 aa14.2□□□□□ -0.14
TSPAN4-208ENST00000409531 TTRP02766 147 aa14.2□□□□□ -0.14
TSPAN4-208ENST00000409531 CD1AP06126 327 aa14.2□□□□□ -0.14
TSPAN4-208ENST00000409531 CD53P19397 219 aa14.2□□□□□ -0.14
TSPAN4-208ENST00000409531 PSMB9P28065 219 aa14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms