RNA–Protein interactions for RNA: ENST00000409323.1

CHRNA1-204, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 1 (best) BASIC

Gene CHRNA1, Length 1,585 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-204ENST00000409323 OR2G2Q8NGZ5 317 aa12.13□□□□□ -0.47
CHRNA1-204ENST00000409323 OR52N1Q8NH53 320 aa12.13□□□□□ -0.47
CHRNA1-204ENST00000409323 AKAP1Q92667 903 aaKnown RBP eCLIP12.13□□□□□ -0.47
CHRNA1-204ENST00000409323 APOBEC3DQ96AK3 386 aaPredicted RBP12.13□□□□□ -0.47
CHRNA1-204ENST00000409323 MRPL48Q96GC5 212 aaKnown RBP12.13□□□□□ -0.47
CHRNA1-204ENST00000409323 LYZL4Q96KX0 146 aa12.13□□□□□ -0.47
CHRNA1-204ENST00000409323 PDCD1LG2Q9BQ51 273 aa12.13□□□□□ -0.47
CHRNA1-204ENST00000409323 SYT3Q9BQG1 590 aa12.13□□□□□ -0.47
CHRNA1-204ENST00000409323 C1QTNF5Q9BXJ0 243 aa12.13□□□□□ -0.47
CHRNA1-204ENST00000409323 SLC24A3Q9HC58 644 aa12.13□□□□□ -0.47
CHRNA1-204ENST00000409323 ACOT13Q9NPJ3 140 aa12.13□□□□□ -0.47
CHRNA1-204ENST00000409323 CA10Q9NS85 328 aa12.13□□□□□ -0.47
CHRNA1-204ENST00000409323 FRRS1LQ9P0K9 344 aa12.13□□□□□ -0.47
CHRNA1-204ENST00000409323 HRNRQ86YZ3 2850 aaPredicted RBP12.13□□□□□ -0.47
CHRNA1-204ENST00000409323 P2RY10O00398 339 aa12.13□□□□□ -0.47
CHRNA1-204ENST00000409323 ATE1O95260 518 aa12.13□□□□□ -0.47
CHRNA1-204ENST00000409323 TTRP02766 147 aa12.13□□□□□ -0.47
CHRNA1-204ENST00000409323 PAX7P23759 505 aa12.13□□□□□ -0.47
CHRNA1-204ENST00000409323 NKX6-1P78426 367 aaPredicted RBP12.13□□□□□ -0.47
CHRNA1-204ENST00000409323 SLC3A1Q07837 685 aa12.13□□□□□ -0.47
CHRNA1-204ENST00000409323 SPHARQ15513 63 aa12.13□□□□□ -0.47
CHRNA1-204ENST00000409323 TIGD6Q17RP2 521 aa12.13□□□□□ -0.47
CHRNA1-204ENST00000409323 C1QTNF12Q5T7M4 302 aa12.13□□□□□ -0.47
CHRNA1-204ENST00000409323 ARL9Q6T311 187 aa12.13□□□□□ -0.47
CHRNA1-204ENST00000409323 COLCA1Q6ZS62 124 aa12.13□□□□□ -0.47
CHRNA1-204ENST00000409323 CATSPERDQ86XM0 798 aa12.13□□□□□ -0.47
CHRNA1-204ENST00000409323 OR51E1Q8TCB6 317 aa12.13□□□□□ -0.47
CHRNA1-204ENST00000409323 NIPAL2Q9H841 368 aa12.13□□□□□ -0.47
CHRNA1-204ENST00000409323 UBTD1Q9HAC8 227 aa12.13□□□□□ -0.47
CHRNA1-204ENST00000409323 BABAM2Q9NXR7 383 aa12.13□□□□□ -0.47
CHRNA1-204ENST00000409323 CISD1Q9NZ45 108 aaKnown RBP12.13□□□□□ -0.47
CHRNA1-204ENST00000409323 MYEF2Q9P2K5 600 aaKnown RBP12.13□□□□□ -0.47
CHRNA1-204ENST00000409323 DUSP13Q9UII6 198 aa12.13□□□□□ -0.47
CHRNA1-204ENST00000409323 CEPT1Q9Y6K0 416 aa12.13□□□□□ -0.47
CHRNA1-204ENST00000409323 AKAP6Q13023 2319 aa12.12□□□□□ -0.47
CHRNA1-204ENST00000409323 A6NIN4 97 aa12.12□□□□□ -0.47
CHRNA1-204ENST00000409323 ZNF701M0R085 212 aaPredicted RBP12.12□□□□□ -0.47
CHRNA1-204ENST00000409323 CTAG2O75638 210 aa12.12□□□□□ -0.47
CHRNA1-204ENST00000409323 INMTO95050 263 aa12.12□□□□□ -0.47
CHRNA1-204ENST00000409323 RAD52P43351 418 aa12.12□□□□□ -0.47
CHRNA1-204ENST00000409323 MAGEB1P43366 347 aa12.12□□□□□ -0.47
CHRNA1-204ENST00000409323 MMP16P51512 607 aa12.12□□□□□ -0.47
CHRNA1-204ENST00000409323 TLE4Q04727 773 aa12.12□□□□□ -0.47
CHRNA1-204ENST00000409323 ALKBH1Q13686 389 aaKnown RBP12.12□□□□□ -0.47
CHRNA1-204ENST00000409323 GK2Q14410 553 aaPredicted RBP12.12□□□□□ -0.47
CHRNA1-204ENST00000409323 TBCEQ15813 527 aaPredicted RBP12.12□□□□□ -0.47
CHRNA1-204ENST00000409323 ZNF672Q499Z4 452 aaPredicted RBP12.12□□□□□ -0.47
CHRNA1-204ENST00000409323 SYT6Q5T7P8 510 aaPredicted RBP12.12□□□□□ -0.47
CHRNA1-204ENST00000409323 RGS7BPQ6MZT1 257 aaPredicted RBP12.12□□□□□ -0.47
CHRNA1-204ENST00000409323 KCTD20Q7Z5Y7 419 aa12.12□□□□□ -0.47
CHRNA1-204ENST00000409323 OR5AS1Q8N127 324 aa12.12□□□□□ -0.47
CHRNA1-204ENST00000409323 BHLHE23Q8NDY6 225 aa12.12□□□□□ -0.47
CHRNA1-204ENST00000409323 OR13C5Q8NGS8 318 aa12.12□□□□□ -0.47
CHRNA1-204ENST00000409323 OR10AC1Q8NH08 325 aa12.12□□□□□ -0.47
CHRNA1-204ENST00000409323 TMEM171Q8WVE6 324 aa12.12□□□□□ -0.47
CHRNA1-204ENST00000409323 NRGNQ92686 78 aa12.12□□□□□ -0.47
CHRNA1-204ENST00000409323 MARVELD3Q96A59 401 aa12.12□□□□□ -0.47
CHRNA1-204ENST00000409323 TMIGD2Q96BF3 282 aa12.12□□□□□ -0.47
CHRNA1-204ENST00000409323 SGK3Q96BR1 496 aa12.12□□□□□ -0.47
CHRNA1-204ENST00000409323 REEP6Q96HR9 211 aa12.12□□□□□ -0.47
CHRNA1-204ENST00000409323 FAM71F1Q96KD3 344 aaPredicted RBP12.12□□□□□ -0.47
CHRNA1-204ENST00000409323 DCLRE1CQ96SD1 692 aaKnown RBP12.12□□□□□ -0.47
CHRNA1-204ENST00000409323 TMEM204Q9BSN7 226 aa12.12□□□□□ -0.47
CHRNA1-204ENST00000409323 CLEC4MQ9H2X3 399 aaPredicted RBP12.12□□□□□ -0.47
CHRNA1-204ENST00000409323 TBCCD1Q9NVR7 557 aa12.12□□□□□ -0.47
CHRNA1-204ENST00000409323 ST6GALNAC2Q9UJ37 374 aa12.12□□□□□ -0.47
CHRNA1-204ENST00000409323 CRYBG3Q68DQ2 2970 aa12.12□□□□□ -0.47
CHRNA1-204ENST00000409323 DCHS2Q6V1P9 2916 aa12.11□□□□□ -0.47
CHRNA1-204ENST00000409323 TRBV2A0A0J9YWF9 115 aa12.11□□□□□ -0.47
CHRNA1-204ENST00000409323 LMX1BO60663 402 aa12.11□□□□□ -0.47
CHRNA1-204ENST00000409323 CELP19835 753 aa12.11□□□□□ -0.47
CHRNA1-204ENST00000409323 PSMB9P28065 219 aa12.11□□□□□ -0.47
CHRNA1-204ENST00000409323 PCSK6P29122 969 aa12.11□□□□□ -0.47
CHRNA1-204ENST00000409323 PTPN13Q12923 2485 aa12.11□□□□□ -0.47
CHRNA1-204ENST00000409323 DMRTC1Q5HYR2 192 aa12.11□□□□□ -0.47
CHRNA1-204ENST00000409323 OR13F1Q8NGS4 319 aa12.11□□□□□ -0.47
CHRNA1-204ENST00000409323 KLF14Q8TD94 323 aaPredicted RBP12.11□□□□□ -0.47
CHRNA1-204ENST00000409323 GTF3AQ92664 365 aaKnown RBP12.11□□□□□ -0.47
CHRNA1-204ENST00000409323 MUL1Q969V5 352 aa12.11□□□□□ -0.47
CHRNA1-204ENST00000409323 CMBLQ96DG6 245 aa12.11□□□□□ -0.47
CHRNA1-204ENST00000409323 MARS2Q96GW9 593 aaKnown RBP12.11□□□□□ -0.47
CHRNA1-204ENST00000409323 BCL2L14Q9BZR8 327 aa12.11□□□□□ -0.47
CHRNA1-204ENST00000409323 OR10A2Q9H208 303 aa12.11□□□□□ -0.47
CHRNA1-204ENST00000409323 TRIM36Q9NQ86 728 aa12.11□□□□□ -0.47
CHRNA1-204ENST00000409323 GPR84Q9NQS5 396 aa12.11□□□□□ -0.47
CHRNA1-204ENST00000409323 NUFIP1Q9UHK0 495 aaKnown RBP12.11□□□□□ -0.47
CHRNA1-204ENST00000409323 SPEF1Q9Y4P9 236 aa12.11□□□□□ -0.47
CHRNA1-204ENST00000409323 TRIM64BA6NI03 449 aa12.1□□□□□ -0.47
CHRNA1-204ENST00000409323 H3BSA7 217 aa12.1□□□□□ -0.47
CHRNA1-204ENST00000409323 LILRA1O75019 489 aa12.1□□□□□ -0.47
CHRNA1-204ENST00000409323 ZFPL1O95159 310 aa12.1□□□□□ -0.47
CHRNA1-204ENST00000409323 APOC1P02654 83 aa12.1□□□□□ -0.47
CHRNA1-204ENST00000409323 OR4A8P0C604 315 aa12.1□□□□□ -0.47
CHRNA1-204ENST00000409323 PRF1P14222 555 aa12.1□□□□□ -0.47
CHRNA1-204ENST00000409323 DCTDP32321 178 aa12.1□□□□□ -0.47
CHRNA1-204ENST00000409323 GLRXP35754 106 aa12.1□□□□□ -0.47
CHRNA1-204ENST00000409323 RGS6P49758 472 aa12.1□□□□□ -0.47
CHRNA1-204ENST00000409323 CDK5R1Q15078 307 aa12.1□□□□□ -0.47
CHRNA1-204ENST00000409323 ADIPOQQ15848 244 aa12.1□□□□□ -0.47
CHRNA1-204ENST00000409323 UBE2UQ5VVX9 321 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms