RNA–Protein interactions for RNA: ENST00000409236.6

AFF3-202, Transcript of AF4/FMR2 family member 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene AFF3, Length 9,849 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AFF3-202ENST00000409236 CLDND1Q9NY35 253 aa12.67□□□□□ -0.38
AFF3-202ENST00000409236 C21orf58P58505 322 aa12.67□□□□□ -0.38
AFF3-202ENST00000409236 LMAN2Q12907 356 aa12.67□□□□□ -0.38
AFF3-202ENST00000409236 TMEM176BQ3YBM2 270 aaPredicted RBP12.67□□□□□ -0.38
AFF3-202ENST00000409236 SLC17A9Q9BYT1 436 aa12.67□□□□□ -0.38
AFF3-202ENST00000409236 DOK5Q9P104 306 aa12.67□□□□□ -0.38
AFF3-202ENST00000409236 NDRG4Q9ULP0 352 aaKnown RBP12.67□□□□□ -0.38
AFF3-202ENST00000409236 DAPP51397 102 aa12.67□□□□□ -0.38
AFF3-202ENST00000409236 RANBP10Q6VN20 620 aa12.67□□□□□ -0.38
AFF3-202ENST00000409236 C17orf78Q8N4C9 275 aa12.67□□□□□ -0.38
AFF3-202ENST00000409236 SLC38A5Q8WUX1 472 aa12.67□□□□□ -0.38
AFF3-202ENST00000409236 ANGPTL4Q9BY76 406 aa12.67□□□□□ -0.38
AFF3-202ENST00000409236 GAGE10A6NGK3 116 aa12.67□□□□□ -0.38
AFF3-202ENST00000409236 PRAMEF26H0Y7S4 382 aa12.67□□□□□ -0.38
AFF3-202ENST00000409236 MEX3DQ86XN8 651 aaKnown RBP12.67□□□□□ -0.38
AFF3-202ENST00000409236 ZNF583Q96ND8 569 aa12.67□□□□□ -0.38
AFF3-202ENST00000409236 WFIKKN1Q96NZ8 548 aa12.67□□□□□ -0.38
AFF3-202ENST00000409236 MOGAT1Q96PD6 335 aa12.67□□□□□ -0.38
AFF3-202ENST00000409236 TMEM147Q9BVK8 224 aa12.67□□□□□ -0.38
AFF3-202ENST00000409236 ASIC5Q9NY37 505 aa12.67□□□□□ -0.38
AFF3-202ENST00000409236 BOLA1Q9Y3E2 137 aa12.67□□□□□ -0.38
AFF3-202ENST00000409236 OOEPA6NGQ2 149 aa12.67□□□□□ -0.38
AFF3-202ENST00000409236 COCHO43405 550 aa12.67□□□□□ -0.38
AFF3-202ENST00000409236 MBTPS2O43462 519 aa12.67□□□□□ -0.38
AFF3-202ENST00000409236 SUCLG1P53597 346 aaKnown RBP12.67□□□□□ -0.38
AFF3-202ENST00000409236 RACK1P63244 317 aaKnown RBP12.67□□□□□ -0.38
AFF3-202ENST00000409236 KCNJ10P78508 379 aa12.67□□□□□ -0.38
AFF3-202ENST00000409236 C17orf67Q0P5P2 114 aa12.67□□□□□ -0.38
AFF3-202ENST00000409236 VHLLQ6RSH7 139 aa12.67□□□□□ -0.38
AFF3-202ENST00000409236 SFXN1Q9H9B4 322 aa12.67□□□□□ -0.38
AFF3-202ENST00000409236 ZMAT3Q9HA38 289 aaKnown RBP12.67□□□□□ -0.38
AFF3-202ENST00000409236 SEBOXQ9HB31 216 aaPredicted RBP12.67□□□□□ -0.38
AFF3-202ENST00000409236 SPHK2Q9NRA0 654 aa12.67□□□□□ -0.38
AFF3-202ENST00000409236 P2RY10O00398 339 aa12.67□□□□□ -0.38
AFF3-202ENST00000409236 LYZL6O75951 148 aa12.67□□□□□ -0.38
AFF3-202ENST00000409236 CST4P01036 141 aa12.67□□□□□ -0.38
AFF3-202ENST00000409236 SLC10A3P09131 477 aa12.67□□□□□ -0.38
AFF3-202ENST00000409236 HAPLN1P10915 354 aaPredicted RBP12.67□□□□□ -0.38
AFF3-202ENST00000409236 ERVFRD-1P60508 538 aa12.67□□□□□ -0.38
AFF3-202ENST00000409236 NEIL2Q969S2 332 aa12.67□□□□□ -0.38
AFF3-202ENST00000409236 CDRT15L2A8MXV6 281 aa12.67□□□□□ -0.38
AFF3-202ENST00000409236 LSM11P83369 360 aaKnown RBP eCLIP12.67□□□□□ -0.38
AFF3-202ENST00000409236 FAM3AP98173 230 aa12.67□□□□□ -0.38
AFF3-202ENST00000409236 DHRS4Q9BTZ2 278 aa12.67□□□□□ -0.38
AFF3-202ENST00000409236 SIRT7Q9NRC8 400 aa12.67□□□□□ -0.38
AFF3-202ENST00000409236 PSAPL1Q6NUJ1 521 aa12.67□□□□□ -0.38
AFF3-202ENST00000409236 HDAC8Q9BY41 377 aa12.67□□□□□ -0.38
AFF3-202ENST00000409236 IKZF4Q9H2S9 585 aa12.67□□□□□ -0.38
AFF3-202ENST00000409236 SPTBN2O15020 2390 aa12.67□□□□□ -0.38
AFF3-202ENST00000409236 SOX15O60248 233 aa12.66□□□□□ -0.38
AFF3-202ENST00000409236 PPP1CAP62136 330 aa12.66□□□□□ -0.38
AFF3-202ENST00000409236 FOXN4Q96NZ1 517 aa12.66□□□□□ -0.38
AFF3-202ENST00000409236 CPPED1Q9BRF8 314 aaPredicted RBP12.66□□□□□ -0.38
AFF3-202ENST00000409236 WSB1Q9Y6I7 421 aa12.66□□□□□ -0.38
AFF3-202ENST00000409236 TMEM128Q5BJH2 165 aa12.66□□□□□ -0.38
AFF3-202ENST00000409236 UFC1Q9Y3C8 167 aa12.66□□□□□ -0.38
AFF3-202ENST00000409236 A0A1W2PQU0 124 aa12.66□□□□□ -0.38
AFF3-202ENST00000409236 ACAA1P09110 424 aaPredicted RBP12.66□□□□□ -0.38
AFF3-202ENST00000409236 RHOBP62745 196 aa12.66□□□□□ -0.38
AFF3-202ENST00000409236 ZNF385BQ569K4 471 aa12.66□□□□□ -0.38
AFF3-202ENST00000409236 HAND1O96004 215 aa12.66□□□□□ -0.38
AFF3-202ENST00000409236 IL22RA2Q969J5 263 aa12.66□□□□□ -0.38
AFF3-202ENST00000409236 TSACCQ96A04 125 aaPredicted RBP12.66□□□□□ -0.38
AFF3-202ENST00000409236 TMEM230Q96A57 120 aa12.66□□□□□ -0.38
AFF3-202ENST00000409236 NAA60Q9H7X0 242 aa12.66□□□□□ -0.38
AFF3-202ENST00000409236 PRDM7Q9NQW5 492 aa12.66□□□□□ -0.38
AFF3-202ENST00000409236 ANXA10Q9UJ72 324 aa12.66□□□□□ -0.38
AFF3-202ENST00000409236 C4AP0C0L4 1744 aa12.66□□□□□ -0.38
AFF3-202ENST00000409236 C4BP0C0L5 1744 aa12.66□□□□□ -0.38
AFF3-202ENST00000409236 SLC5A10A0PJK1 596 aa12.66□□□□□ -0.38
AFF3-202ENST00000409236 CD14P08571 375 aa12.66□□□□□ -0.38
AFF3-202ENST00000409236 OR52I2Q8NH67 350 aa12.66□□□□□ -0.38
AFF3-202ENST00000409236 PKIBQ9C010 78 aa12.66□□□□□ -0.38
AFF3-202ENST00000409236 SOWAHBA6NEL2 793 aa12.66□□□□□ -0.38
AFF3-202ENST00000409236 RAD52P43351 418 aa12.66□□□□□ -0.38
AFF3-202ENST00000409236 FOXO1Q12778 655 aa12.66□□□□□ -0.38
AFF3-202ENST00000409236 SMN1Q16637 294 aaKnown RBP12.66□□□□□ -0.38
AFF3-202ENST00000409236 MANEAQ5SRI9 462 aa12.66□□□□□ -0.38
AFF3-202ENST00000409236 VRK2Q86Y07 508 aa12.66□□□□□ -0.38
AFF3-202ENST00000409236 ZNF142P52746 1687 aaPredicted RBP12.66□□□□□ -0.38
AFF3-202ENST00000409236 LDB3O75112 727 aa12.66□□□□□ -0.38
AFF3-202ENST00000409236 IL5P05113 134 aa12.66□□□□□ -0.38
AFF3-202ENST00000409236 CST6Q15828 149 aa12.66□□□□□ -0.38
AFF3-202ENST00000409236 HNRNPA1L2Q32P51 320 aaKnown RBP12.66□□□□□ -0.38
AFF3-202ENST00000409236 AAED1Q7RTV5 226 aa12.66□□□□□ -0.38
AFF3-202ENST00000409236 RTN4IP1Q8WWV3 396 aaPredicted RBP12.66□□□□□ -0.38
AFF3-202ENST00000409236 ZNF737O75373 536 aa12.66□□□□□ -0.38
AFF3-202ENST00000409236 ACTL6AO96019 429 aa12.66□□□□□ -0.38
AFF3-202ENST00000409236 C9orf152Q5JTZ5 239 aa12.66□□□□□ -0.38
AFF3-202ENST00000409236 SCAMP4Q969E2 229 aa12.66□□□□□ -0.38
AFF3-202ENST00000409236 SMIM19Q96E16 107 aa12.66□□□□□ -0.38
AFF3-202ENST00000409236 TMEM38AQ9H6F2 299 aa12.66□□□□□ -0.38
AFF3-202ENST00000409236 PLA1AQ53H76 456 aa12.65□□□□□ -0.38
AFF3-202ENST00000409236 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa12.65□□□□□ -0.38
AFF3-202ENST00000409236 ADAT3Q96EY9 351 aaPredicted RBP12.65□□□□□ -0.38
AFF3-202ENST00000409236 GPR137Q96N19 417 aa12.65□□□□□ -0.38
AFF3-202ENST00000409236 ZNF426Q9BUY5 554 aa12.65□□□□□ -0.38
AFF3-202ENST00000409236 CHRNA10Q9GZZ6 450 aa12.65□□□□□ -0.38
AFF3-202ENST00000409236 PIPOXQ9P0Z9 390 aa12.65□□□□□ -0.38
AFF3-202ENST00000409236 IGLV3-22A0A075B6J6 115 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms