RNA–Protein interactions for RNA: ENST00000405578.8

RPAIN-204, Transcript of RPA interacting protein, humanhuman

TSL 2 BASIC

Gene RPAIN, Length 1,083 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-204ENST00000405578 EGFL6Q8IUX8 553 aa9.07□□□□□ -0.96
RPAIN-204ENST00000405578 MUC15Q8N387 334 aa9.07□□□□□ -0.96
RPAIN-204ENST00000405578 OR52H1Q8NGJ2 320 aa9.07□□□□□ -0.96
RPAIN-204ENST00000405578 OR10S1Q8NGN2 331 aa9.07□□□□□ -0.96
RPAIN-204ENST00000405578 FBLIM1Q8WUP2 373 aa9.07□□□□□ -0.96
RPAIN-204ENST00000405578 SLC7A6Q92536 515 aa9.07□□□□□ -0.96
RPAIN-204ENST00000405578 OR8B4Q96RC9 309 aa9.07□□□□□ -0.96
RPAIN-204ENST00000405578 DOK1Q99704 481 aa9.07□□□□□ -0.96
RPAIN-204ENST00000405578 PLK3Q9H4B4 646 aa9.07□□□□□ -0.96
RPAIN-204ENST00000405578 OPA3Q9H6K4 179 aa9.07□□□□□ -0.96
RPAIN-204ENST00000405578 YAE1D1Q9NRH1 226 aa9.07□□□□□ -0.96
RPAIN-204ENST00000405578 PLCXD1Q9NUJ7 323 aa9.07□□□□□ -0.96
RPAIN-204ENST00000405578 MRPS18AQ9NVS2 196 aaKnown RBP9.07□□□□□ -0.96
RPAIN-204ENST00000405578 SLCO1C1Q9NYB5 712 aa9.07□□□□□ -0.96
RPAIN-204ENST00000405578 CNOT2Q9NZN8 540 aaKnown RBP9.07□□□□□ -0.96
RPAIN-204ENST00000405578 BLOC1S6Q9UL45 172 aa9.07□□□□□ -0.96
RPAIN-204ENST00000405578 TPRKBQ9Y3C4 175 aa9.07□□□□□ -0.96
RPAIN-204ENST00000405578 LRP12Q9Y561 859 aa9.07□□□□□ -0.96
RPAIN-204ENST00000405578 A0A1W2PPW3 197 aa9.06□□□□□ -0.96
RPAIN-204ENST00000405578 METTL15A6NJ78 407 aa9.06□□□□□ -0.96
RPAIN-204ENST00000405578 GPRIN2O60269 458 aa9.06□□□□□ -0.96
RPAIN-204ENST00000405578 ERCC1P07992 297 aaPredicted RBP9.06□□□□□ -0.96
RPAIN-204ENST00000405578 PSKH1P11801 424 aa9.06□□□□□ -0.96
RPAIN-204ENST00000405578 PIPP12273 146 aaPredicted RBP9.06□□□□□ -0.96
RPAIN-204ENST00000405578 SELEP16581 610 aa9.06□□□□□ -0.96
RPAIN-204ENST00000405578 CFL1P23528 166 aaKnown RBP9.06□□□□□ -0.96
RPAIN-204ENST00000405578 EVX1P49640 407 aa9.06□□□□□ -0.96
RPAIN-204ENST00000405578 KLF3P57682 345 aaPredicted RBP9.06□□□□□ -0.96
RPAIN-204ENST00000405578 PSMA6P60900 246 aaKnown RBP9.06□□□□□ -0.96
RPAIN-204ENST00000405578 MRPL28Q13084 256 aaKnown RBP9.06□□□□□ -0.96
RPAIN-204ENST00000405578 KRTAP27-1Q3LI81 207 aa9.06□□□□□ -0.96
RPAIN-204ENST00000405578 C6orf141Q5SZD1 244 aa9.06□□□□□ -0.96
RPAIN-204ENST00000405578 TMPRSS11AQ6ZMR5 421 aa9.06□□□□□ -0.96
RPAIN-204ENST00000405578 RFPL4BQ6ZWI9 263 aa9.06□□□□□ -0.96
RPAIN-204ENST00000405578 ZNF101Q8IZC7 436 aa9.06□□□□□ -0.96
RPAIN-204ENST00000405578 STX19Q8N4C7 294 aa9.06□□□□□ -0.96
RPAIN-204ENST00000405578 YIPF7Q8N8F6 280 aa9.06□□□□□ -0.96
RPAIN-204ENST00000405578 ZNF540Q8NDQ6 660 aa9.06□□□□□ -0.96
RPAIN-204ENST00000405578 OR52I1Q8NGK6 324 aa9.06□□□□□ -0.96
RPAIN-204ENST00000405578 LILRB1Q8NHL6 650 aaPredicted RBP9.06□□□□□ -0.96
RPAIN-204ENST00000405578 SYNPRQ8TBG9 265 aa9.06□□□□□ -0.96
RPAIN-204ENST00000405578 HAVCR2Q8TDQ0 301 aa9.06□□□□□ -0.96
RPAIN-204ENST00000405578 TMEM171Q8WVE6 324 aa9.06□□□□□ -0.96
RPAIN-204ENST00000405578 NEUROG1Q92886 237 aa9.06□□□□□ -0.96
RPAIN-204ENST00000405578 MYDGFQ969H8 173 aa9.06□□□□□ -0.96
RPAIN-204ENST00000405578 TMEM80Q96HE8 168 aa9.06□□□□□ -0.96
RPAIN-204ENST00000405578 PGAM5Q96HS1 289 aa9.06□□□□□ -0.96
RPAIN-204ENST00000405578 AMELYQ99218 206 aa9.06□□□□□ -0.96
RPAIN-204ENST00000405578 C19orf24Q9BVV8 132 aa9.06□□□□□ -0.96
RPAIN-204ENST00000405578 C1QTNF5Q9BXJ0 243 aa9.06□□□□□ -0.96
RPAIN-204ENST00000405578 OR10A2Q9H208 303 aa9.06□□□□□ -0.96
RPAIN-204ENST00000405578 RGCCQ9H4X1 137 aa9.06□□□□□ -0.96
RPAIN-204ENST00000405578 CXorf56Q9H5V9 222 aa9.06□□□□□ -0.96
RPAIN-204ENST00000405578 MOB1AQ9H8S9 216 aa9.06□□□□□ -0.96
RPAIN-204ENST00000405578 FGF20Q9NP95 211 aaPredicted RBP9.06□□□□□ -0.96
RPAIN-204ENST00000405578 CBLN4Q9NTU7 201 aa9.06□□□□□ -0.96
RPAIN-204ENST00000405578 DUSP13Q9UII6 198 aa9.06□□□□□ -0.96
RPAIN-204ENST00000405578 COPS3Q9UNS2 423 aa9.06□□□□□ -0.96
RPAIN-204ENST00000405578 LAMP3Q9UQV4 416 aa9.06□□□□□ -0.96
RPAIN-204ENST00000405578 KLHDC2Q9Y2U9 406 aa9.06□□□□□ -0.96
RPAIN-204ENST00000405578 EXOSC1Q9Y3B2 195 aaKnown RBP9.06□□□□□ -0.96
RPAIN-204ENST00000405578 N6AMT1Q9Y5N5 214 aa9.06□□□□□ -0.96
RPAIN-204ENST00000405578 PMF1-BGLAPU3KQ54 211 aa9.06□□□□□ -0.96
RPAIN-204ENST00000405578 TMEM269A0A1B0GVZ9 245 aa9.05□□□□□ -0.96
RPAIN-204ENST00000405578 PLSCR5A0PG75 271 aa9.05□□□□□ -0.96
RPAIN-204ENST00000405578 J3QRE1 110 aa9.05□□□□□ -0.96
RPAIN-204ENST00000405578 PSMD9O00233 223 aa9.05□□□□□ -0.96
RPAIN-204ENST00000405578 TBX1O43435 398 aa9.05□□□□□ -0.96
RPAIN-204ENST00000405578 XRCC2O43543 280 aa9.05□□□□□ -0.96
RPAIN-204ENST00000405578 DENRO43583 198 aaKnown RBP9.05□□□□□ -0.96
RPAIN-204ENST00000405578 NGFP01138 241 aa9.05□□□□□ -0.96
RPAIN-204ENST00000405578 IGHA1P01876 353 aa9.05□□□□□ -0.96
RPAIN-204ENST00000405578 CCDC159P0C7I6 412 aa9.05□□□□□ -0.96
RPAIN-204ENST00000405578 ZNF250P15622 560 aa9.05□□□□□ -0.96
RPAIN-204ENST00000405578 ATP5J2P56134 94 aa9.05□□□□□ -0.96
RPAIN-204ENST00000405578 ZNF121P58317 390 aaPredicted RBP9.05□□□□□ -0.96
RPAIN-204ENST00000405578 ST3GAL4Q11206 333 aa9.05□□□□□ -0.96
RPAIN-204ENST00000405578 EFNB3Q15768 340 aa9.05□□□□□ -0.96
RPAIN-204ENST00000405578 ADIPOQQ15848 244 aa9.05□□□□□ -0.96
RPAIN-204ENST00000405578 TIGD6Q17RP2 521 aa9.05□□□□□ -0.96
RPAIN-204ENST00000405578 ZMAT1Q5H9K5 638 aa9.05□□□□□ -0.96
RPAIN-204ENST00000405578 SPATA46Q5T0L3 261 aa9.05□□□□□ -0.96
RPAIN-204ENST00000405578 MBNL2Q5VZF2 373 aaKnown RBP9.05□□□□□ -0.96
RPAIN-204ENST00000405578 COLCA1Q6ZS62 124 aa9.05□□□□□ -0.96
RPAIN-204ENST00000405578 FAM57BQ71RH2 274 aa9.05□□□□□ -0.96
RPAIN-204ENST00000405578 MRPL21Q7Z2W9 205 aaKnown RBP9.05□□□□□ -0.96
RPAIN-204ENST00000405578 ZNF786Q8N393 782 aa9.05□□□□□ -0.96
RPAIN-204ENST00000405578 SLC25A40Q8TBP6 338 aa9.05□□□□□ -0.96
RPAIN-204ENST00000405578 KLF14Q8TD94 323 aaPredicted RBP9.05□□□□□ -0.96
RPAIN-204ENST00000405578 MRPL24Q96A35 216 aaKnown RBP9.05□□□□□ -0.96
RPAIN-204ENST00000405578 ALG8Q9BVK2 526 aa9.05□□□□□ -0.96
RPAIN-204ENST00000405578 TTTY10Q9BZA0 68 aa9.05□□□□□ -0.96
RPAIN-204ENST00000405578 OR2J1Q9GZK6 312 aa9.05□□□□□ -0.96
RPAIN-204ENST00000405578 BRD7Q9NPI1 651 aa9.05□□□□□ -0.96
RPAIN-204ENST00000405578 CYSLTR2Q9NS75 346 aa9.05□□□□□ -0.96
RPAIN-204ENST00000405578 PSORS1C1Q9UIG5 152 aa9.05□□□□□ -0.96
RPAIN-204ENST00000405578 ZNF391Q9UJN7 358 aa9.05□□□□□ -0.96
RPAIN-204ENST00000405578 GNG8Q9UK08 70 aa9.05□□□□□ -0.96
RPAIN-204ENST00000405578 GTF2A1LQ9UNN4 478 aa9.05□□□□□ -0.96
RPAIN-204ENST00000405578 DIMT1Q9UNQ2 313 aaKnown RBP9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 71 ms