RNA–Protein interactions for RNA: ENST00000404909.5

RTN4-208, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,102 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-208ENST00000404909 TBC1D15Q8TC07 691 aa3.23□□□□□ -1.89
RTN4-208ENST00000404909 FGGYQ96C11 551 aa3.23□□□□□ -1.89
RTN4-208ENST00000404909 SFXN3Q9BWM7 321 aa3.23□□□□□ -1.89
RTN4-208ENST00000404909 OR10A2Q9H208 303 aa3.23□□□□□ -1.89
RTN4-208ENST00000404909 MOB1AQ9H8S9 216 aa3.23□□□□□ -1.89
RTN4-208ENST00000404909 PLEKHA1Q9HB21 404 aa3.23□□□□□ -1.89
RTN4-208ENST00000404909 CCDC59Q9P031 241 aaKnown RBP3.23□□□□□ -1.89
RTN4-208ENST00000404909 CKLFQ9UBR5 152 aa3.23□□□□□ -1.89
RTN4-208ENST00000404909 OSGIN2Q9Y236 505 aa3.23□□□□□ -1.89
RTN4-208ENST00000404909 PLCE1Q9P212 2302 aa3.23□□□□□ -1.89
RTN4-208ENST00000404909 ZNF462Q96JM2 2506 aa3.23□□□□□ -1.89
RTN4-208ENST00000404909 SHANK1Q9Y566 2161 aa3.23□□□□□ -1.89
RTN4-208ENST00000404909 ANXA2P2A6NMY6 339 aa3.23□□□□□ -1.89
RTN4-208ENST00000404909 VGLL3A8MV65 326 aa3.23□□□□□ -1.89
RTN4-208ENST00000404909 CNOT4O95628 575 aaKnown RBP3.23□□□□□ -1.89
RTN4-208ENST00000404909 CGAP01215 116 aa3.23□□□□□ -1.89
RTN4-208ENST00000404909 CRHP06850 196 aa3.23□□□□□ -1.89
RTN4-208ENST00000404909 CELA3BP08861 270 aa3.23□□□□□ -1.89
RTN4-208ENST00000404909 OCMP0CE72 109 aaPredicted RBP3.23□□□□□ -1.89
RTN4-208ENST00000404909 SLC2A2P11168 524 aaPredicted RBP3.23□□□□□ -1.89
RTN4-208ENST00000404909 ZNF20P17024 532 aa3.23□□□□□ -1.89
RTN4-208ENST00000404909 ACHEP22303 614 aa3.23□□□□□ -1.89
RTN4-208ENST00000404909 IL32P24001 234 aa3.23□□□□□ -1.89
RTN4-208ENST00000404909 CEACAM8P31997 349 aaPredicted RBP3.23□□□□□ -1.89
RTN4-208ENST00000404909 OTX1P32242 354 aaPredicted RBP3.23□□□□□ -1.89
RTN4-208ENST00000404909 OPRM1P35372 400 aa3.23□□□□□ -1.89
RTN4-208ENST00000404909 APLNRP35414 380 aa3.23□□□□□ -1.89
RTN4-208ENST00000404909 SPOCK1Q08629 439 aa3.23□□□□□ -1.89
RTN4-208ENST00000404909 GABRA6Q16445 453 aa3.23□□□□□ -1.89
RTN4-208ENST00000404909 EIF2S3LQ2VIR3 472 aaKnown RBP3.23□□□□□ -1.89
RTN4-208ENST00000404909 SLC25A35Q3KQZ1 300 aa3.23□□□□□ -1.89
RTN4-208ENST00000404909 SFXN4Q6P4A7 337 aa3.23□□□□□ -1.89
RTN4-208ENST00000404909 ZNF474Q6S9Z5 364 aaPredicted RBP3.23□□□□□ -1.89
RTN4-208ENST00000404909 PCSK4Q6UW60 755 aa3.23□□□□□ -1.89
RTN4-208ENST00000404909 DRAM2Q6UX65 266 aa3.23□□□□□ -1.89
RTN4-208ENST00000404909 UNQ9370/PRO34162Q6UXP9 181 aa3.23□□□□□ -1.89
RTN4-208ENST00000404909 STAC2Q6ZMT1 411 aa3.23□□□□□ -1.89
RTN4-208ENST00000404909 OR52H1Q8NGJ2 320 aa3.23□□□□□ -1.89
RTN4-208ENST00000404909 CEP19Q96LK0 163 aa3.23□□□□□ -1.89
RTN4-208ENST00000404909 ZFP3Q96NJ6 502 aa3.23□□□□□ -1.89
RTN4-208ENST00000404909 CNTNAP3BQ96NU0 1288 aa3.23□□□□□ -1.89
RTN4-208ENST00000404909 MED18Q9BUE0 208 aa3.23□□□□□ -1.89
RTN4-208ENST00000404909 CNTNAP3Q9BZ76 1288 aa3.23□□□□□ -1.89
RTN4-208ENST00000404909 MMP27Q9H306 513 aa3.23□□□□□ -1.89
RTN4-208ENST00000404909 SLC17A5Q9NRA2 495 aa3.23□□□□□ -1.89
RTN4-208ENST00000404909 TAS2R4Q9NYW5 299 aa3.23□□□□□ -1.89
RTN4-208ENST00000404909 ZNF835Q9Y2P0 537 aa3.23□□□□□ -1.89
RTN4-208ENST00000404909 ABCA4P78363 2273 aa3.23□□□□□ -1.89
RTN4-208ENST00000404909 HEATR1Q9H583 2144 aaKnown RBP3.23□□□□□ -1.89
RTN4-208ENST00000404909 A0A0B4J203 849 aa3.22□□□□□ -1.89
RTN4-208ENST00000404909 TRAV1-2A0A0B4J238 106 aa3.22□□□□□ -1.89
RTN4-208ENST00000404909 A0A1B0GTI1 187 aa3.22□□□□□ -1.89
RTN4-208ENST00000404909 RAF1P04049 648 aa3.22□□□□□ -1.89
RTN4-208ENST00000404909 ISG15P05161 165 aa3.22□□□□□ -1.89
RTN4-208ENST00000404909 CLDN12P56749 244 aa3.22□□□□□ -1.89
RTN4-208ENST00000404909 FAM27E3Q08E93 113 aa3.22□□□□□ -1.89
RTN4-208ENST00000404909 MRPL49Q13405 166 aaKnown RBP3.22□□□□□ -1.89
RTN4-208ENST00000404909 P2RY6Q15077 328 aa3.22□□□□□ -1.89
RTN4-208ENST00000404909 HES5Q5TA89 166 aa3.22□□□□□ -1.89
RTN4-208ENST00000404909 BHLHA15Q7RTS1 189 aaPredicted RBP3.22□□□□□ -1.89
RTN4-208ENST00000404909 PRSS45Q7RTY3 260 aa3.22□□□□□ -1.89
RTN4-208ENST00000404909 TPRA1Q86W33 373 aa3.22□□□□□ -1.89
RTN4-208ENST00000404909 ZNF584Q8IVC4 421 aa3.22□□□□□ -1.89
RTN4-208ENST00000404909 PLPP7Q8NBV4 271 aa3.22□□□□□ -1.89
RTN4-208ENST00000404909 SLC30A7Q8NEW0 376 aa3.22□□□□□ -1.89
RTN4-208ENST00000404909 OR51A2Q8NGJ7 313 aa3.22□□□□□ -1.89
RTN4-208ENST00000404909 OR1J2Q8NGS2 313 aa3.22□□□□□ -1.89
RTN4-208ENST00000404909 ZNF671Q8TAW3 534 aa3.22□□□□□ -1.89
RTN4-208ENST00000404909 PHYHIPQ92561 330 aa3.22□□□□□ -1.89
RTN4-208ENST00000404909 AP3S1Q92572 193 aa3.22□□□□□ -1.89
RTN4-208ENST00000404909 RND1Q92730 232 aa3.22□□□□□ -1.89
RTN4-208ENST00000404909 ADAT3Q96EY9 351 aaPredicted RBP3.22□□□□□ -1.89
RTN4-208ENST00000404909 REEP6Q96HR9 211 aa3.22□□□□□ -1.89
RTN4-208ENST00000404909 SLC30A2Q9BRI3 323 aa3.22□□□□□ -1.89
RTN4-208ENST00000404909 PLGRKTQ9HBL7 147 aa3.22□□□□□ -1.89
RTN4-208ENST00000404909 SMURF1Q9HCE7 757 aa3.22□□□□□ -1.89
RTN4-208ENST00000404909 ZNF275Q9NSD4 429 aaPredicted RBP3.22□□□□□ -1.89
RTN4-208ENST00000404909 CRNNQ9UBG3 495 aaPredicted RBP3.22□□□□□ -1.89
RTN4-208ENST00000404909 PLEKHB1Q9UF11 243 aaPredicted RBP3.22□□□□□ -1.89
RTN4-208ENST00000404909 TRBV5-7A0A0A0MS05 114 aa3.22□□□□□ -1.89
RTN4-208ENST00000404909 CCL21O00585 134 aa3.22□□□□□ -1.89
RTN4-208ENST00000404909 PAHP00439 452 aa3.22□□□□□ -1.89
RTN4-208ENST00000404909 NGFP01138 241 aa3.22□□□□□ -1.89
RTN4-208ENST00000404909 SERPINA5P05154 406 aa3.22□□□□□ -1.89
RTN4-208ENST00000404909 FAHP16930 419 aa3.22□□□□□ -1.89
RTN4-208ENST00000404909 COX5AP20674 150 aa3.22□□□□□ -1.89
RTN4-208ENST00000404909 PPP3R1P63098 170 aa3.22□□□□□ -1.89
RTN4-208ENST00000404909 ST3GAL2Q16842 350 aa3.22□□□□□ -1.89
RTN4-208ENST00000404909 DOK3Q7L591 496 aa3.22□□□□□ -1.89
RTN4-208ENST00000404909 MYPOPQ86VE0 399 aaPredicted RBP3.22□□□□□ -1.89
RTN4-208ENST00000404909 FJX1Q86VR8 437 aa3.22□□□□□ -1.89
RTN4-208ENST00000404909 SERPINA12Q8IW75 414 aa3.22□□□□□ -1.89
RTN4-208ENST00000404909 LAX1Q8IWV1 398 aa3.22□□□□□ -1.89
RTN4-208ENST00000404909 ZNF101Q8IZC7 436 aa3.22□□□□□ -1.89
RTN4-208ENST00000404909 PAQR4Q8N4S7 273 aaPredicted RBP3.22□□□□□ -1.89
RTN4-208ENST00000404909 JAGN1Q8N5M9 183 aa3.22□□□□□ -1.89
RTN4-208ENST00000404909 DTX3Q8N9I9 347 aa3.22□□□□□ -1.89
RTN4-208ENST00000404909 OR6Q1Q8NGQ2 317 aa3.22□□□□□ -1.89
RTN4-208ENST00000404909 OR13C9Q8NGT0 318 aa3.22□□□□□ -1.89
RTN4-208ENST00000404909 NPRL2Q8WTW4 380 aa3.22□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms