RNA–Protein interactions for RNA: ENST00000404484.8

TPM1-208, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,568 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-208ENST00000404484 DOCK7Q96N67 2140 aa18.33■□□□□ 0.52
TPM1-208ENST00000404484 A0A0G2JK05 382 aa18.32■□□□□ 0.52
TPM1-208ENST00000404484 CTDSP2O14595 271 aa18.32■□□□□ 0.52
TPM1-208ENST00000404484 SLC19A2O60779 497 aa18.32■□□□□ 0.52
TPM1-208ENST00000404484 IL2RAP01589 272 aa18.32■□□□□ 0.52
TPM1-208ENST00000404484 TMIGD3P0DMS9 266 aaPredicted RBP18.32■□□□□ 0.52
TPM1-208ENST00000404484 BMP4P12644 408 aa18.32■□□□□ 0.52
TPM1-208ENST00000404484 TIMP3P35625 211 aa18.32■□□□□ 0.52
TPM1-208ENST00000404484 ETV6P41212 452 aa18.32■□□□□ 0.52
TPM1-208ENST00000404484 FOXG1P55316 489 aaPredicted RBP18.32■□□□□ 0.52
TPM1-208ENST00000404484 OR10A3P58181 314 aa18.32■□□□□ 0.52
TPM1-208ENST00000404484 ZNF45Q02386 682 aa18.32■□□□□ 0.52
TPM1-208ENST00000404484 PABPC1L2AQ5JQF8 200 aa18.32■□□□□ 0.52
TPM1-208ENST00000404484 DOK3Q7L591 496 aa18.32■□□□□ 0.52
TPM1-208ENST00000404484 NR2C2APQ86WQ0 139 aa18.32■□□□□ 0.52
TPM1-208ENST00000404484 COMMD2Q86X83 199 aa18.32■□□□□ 0.52
TPM1-208ENST00000404484 MFSD4AQ8N468 514 aa18.32■□□□□ 0.52
TPM1-208ENST00000404484 OR10A2Q9H208 303 aa18.32■□□□□ 0.52
TPM1-208ENST00000404484 PLSCR4Q9NRQ2 329 aa18.32■□□□□ 0.52
TPM1-208ENST00000404484 PROCRQ9UNN8 238 aa18.32■□□□□ 0.52
TPM1-208ENST00000404484 ZNF835Q9Y2P0 537 aa18.32■□□□□ 0.52
TPM1-208ENST00000404484 N6AMT1Q9Y5N5 214 aa18.32■□□□□ 0.52
TPM1-208ENST00000404484 DOPEY1Q5JWR5 2465 aa18.31■□□□□ 0.52
TPM1-208ENST00000404484 PATE4P0C8F1 98 aa18.31■□□□□ 0.52
TPM1-208ENST00000404484 SLC2A1P11166 492 aa18.31■□□□□ 0.52
TPM1-208ENST00000404484 EPXP11678 715 aa18.31■□□□□ 0.52
TPM1-208ENST00000404484 CCL1P22362 96 aa18.31■□□□□ 0.52
TPM1-208ENST00000404484 APEX1P27695 318 aaKnown RBP18.31■□□□□ 0.52
TPM1-208ENST00000404484 RBPJQ06330 500 aa18.31■□□□□ 0.52
TPM1-208ENST00000404484 RSPO1Q2MKA7 263 aaPredicted RBP18.31■□□□□ 0.52
TPM1-208ENST00000404484 C4orf17Q53FE4 359 aa18.31■□□□□ 0.52
TPM1-208ENST00000404484 CEP78Q5JTW2 689 aa18.31■□□□□ 0.52
TPM1-208ENST00000404484 RTL6Q6ICC9 239 aa18.31■□□□□ 0.52
TPM1-208ENST00000404484 OR51E1Q8TCB6 317 aa18.31■□□□□ 0.52
TPM1-208ENST00000404484 BCL2L2Q92843 193 aaPredicted RBP18.31■□□□□ 0.52
TPM1-208ENST00000404484 MRI1Q9BV20 369 aa18.31■□□□□ 0.52
TPM1-208ENST00000404484 PALMDQ9NP74 551 aa18.31■□□□□ 0.52
TPM1-208ENST00000404484 ZNF275Q9NSD4 429 aaPredicted RBP18.31■□□□□ 0.52
TPM1-208ENST00000404484 ZNF224Q9NZL3 707 aa18.31■□□□□ 0.52
TPM1-208ENST00000404484 ABRACLQ9P1F3 81 aa18.31■□□□□ 0.52
TPM1-208ENST00000404484 DAPK2Q9UIK4 370 aa18.31■□□□□ 0.52
TPM1-208ENST00000404484 AK6Q9Y3D8 172 aaKnown RBP18.31■□□□□ 0.52
TPM1-208ENST00000404484 V9GY05 133 aa18.31■□□□□ 0.52
TPM1-208ENST00000404484 ANXA2P2A6NMY6 339 aa18.3■□□□□ 0.52
TPM1-208ENST00000404484 H3BSH0 61 aa18.3■□□□□ 0.52
TPM1-208ENST00000404484 HOXB1P14653 301 aaPredicted RBP18.3■□□□□ 0.52
TPM1-208ENST00000404484 PLP2Q04941 152 aa18.3■□□□□ 0.52
TPM1-208ENST00000404484 FJX1Q86VR8 437 aa18.3■□□□□ 0.52
TPM1-208ENST00000404484 ZNF433Q8N7K0 673 aaPredicted RBP18.3■□□□□ 0.52
TPM1-208ENST00000404484 C1orf162Q8NEQ5 155 aaPredicted RBP18.3■□□□□ 0.52
TPM1-208ENST00000404484 FGFBP3Q8TAT2 258 aa18.3■□□□□ 0.52
TPM1-208ENST00000404484 SLC30A2Q9BRI3 323 aa18.3■□□□□ 0.52
TPM1-208ENST00000404484 GPR84Q9NQS5 396 aa18.3■□□□□ 0.52
TPM1-208ENST00000404484 ZNF391Q9UJN7 358 aa18.3■□□□□ 0.52
TPM1-208ENST00000404484 FAM215AQ9Y5M1 114 aa18.3■□□□□ 0.52
TPM1-208ENST00000404484 TRGV8A0A0C4DH27 118 aa18.3■□□□□ 0.52
TPM1-208ENST00000404484 A0A1B0GTI1 187 aa18.3■□□□□ 0.52
TPM1-208ENST00000404484 MEGF11A6BM72 1044 aa18.3■□□□□ 0.52
TPM1-208ENST00000404484 WIPF3A6NGB9 483 aa18.3■□□□□ 0.52
TPM1-208ENST00000404484 AIPO00170 330 aa18.3■□□□□ 0.52
TPM1-208ENST00000404484 HLA-HP01893 362 aa18.3■□□□□ 0.52
TPM1-208ENST00000404484 DBHP09172 617 aa18.3■□□□□ 0.52
TPM1-208ENST00000404484 CD79AP11912 226 aa18.3■□□□□ 0.52
TPM1-208ENST00000404484 TNFSF8P32971 234 aa18.3■□□□□ 0.52
TPM1-208ENST00000404484 VWA1Q6PCB0 445 aa18.3■□□□□ 0.52
TPM1-208ENST00000404484 SEM1Q6ZVN7 128 aa18.3■□□□□ 0.52
TPM1-208ENST00000404484 LRRTM1Q86UE6 522 aa18.3■□□□□ 0.52
TPM1-208ENST00000404484 CCDC190Q86UF4 302 aa18.3■□□□□ 0.52
TPM1-208ENST00000404484 PARP16Q8N5Y8 322 aa18.3■□□□□ 0.52
TPM1-208ENST00000404484 SSC4DQ8WTU2 575 aa18.3■□□□□ 0.52
TPM1-208ENST00000404484 ORAI1Q96D31 301 aa18.3■□□□□ 0.52
TPM1-208ENST00000404484 ABCB9Q9NP78 766 aa18.3■□□□□ 0.52
TPM1-208ENST00000404484 COMMD3Q9UBI1 195 aa18.3■□□□□ 0.52
TPM1-208ENST00000404484 TBX1O43435 398 aa18.29■□□□□ 0.52
TPM1-208ENST00000404484 TNFSF13O75888 250 aa18.29■□□□□ 0.52
TPM1-208ENST00000404484 ZNF20P17024 532 aa18.29■□□□□ 0.52
TPM1-208ENST00000404484 COX5AP20674 150 aa18.29■□□□□ 0.52
TPM1-208ENST00000404484 IGHV1-2P23083 117 aa18.29■□□□□ 0.52
TPM1-208ENST00000404484 CD40LGP29965 261 aa18.29■□□□□ 0.52
TPM1-208ENST00000404484 CA7P43166 264 aa18.29■□□□□ 0.52
TPM1-208ENST00000404484 TBRG1Q3YBR2 411 aa18.29■□□□□ 0.52
TPM1-208ENST00000404484 SERPINA12Q8IW75 414 aa18.29■□□□□ 0.52
TPM1-208ENST00000404484 LAX1Q8IWV1 398 aa18.29■□□□□ 0.52
TPM1-208ENST00000404484 SLC7A6Q92536 515 aa18.29■□□□□ 0.52
TPM1-208ENST00000404484 SFXN3Q9BWM7 321 aa18.29■□□□□ 0.52
TPM1-208ENST00000404484 SH3BGRL2Q9UJC5 107 aa18.29■□□□□ 0.52
TPM1-208ENST00000404484 TINAGQ9UJW2 476 aa18.29■□□□□ 0.52
TPM1-208ENST00000404484 TRAV8-7A0A075B6U6 113 aa18.28■□□□□ 0.52
TPM1-208ENST00000404484 A0A1B0GUH1 482 aa18.28■□□□□ 0.52
TPM1-208ENST00000404484 CIB4A0PJX0 185 aa18.28■□□□□ 0.52
TPM1-208ENST00000404484 IFITM5A6NNB3 132 aa18.28■□□□□ 0.52
TPM1-208ENST00000404484 VGLL3A8MV65 326 aa18.28■□□□□ 0.52
TPM1-208ENST00000404484 MTRF1O75570 445 aaKnown RBP18.28■□□□□ 0.52
TPM1-208ENST00000404484 IGLV3-1P01715 115 aa18.28■□□□□ 0.52
TPM1-208ENST00000404484 IGFBP3P17936 291 aaPredicted RBP18.28■□□□□ 0.52
TPM1-208ENST00000404484 THBS2P35442 1172 aa18.28■□□□□ 0.52
TPM1-208ENST00000404484 UBE2NP61088 152 aaKnown RBP18.28■□□□□ 0.52
TPM1-208ENST00000404484 RAB1AP62820 205 aa18.28■□□□□ 0.52
TPM1-208ENST00000404484 FOXF2Q12947 444 aa18.28■□□□□ 0.52
TPM1-208ENST00000404484 SLC25A35Q3KQZ1 300 aa18.28■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms