RNA–Protein interactions for RNA: ENST00000404321.3

PTPRN2-204, Transcript of protein tyrosine phosphatase, receptor type N2, humanhuman

TSL 5 BASIC

Gene PTPRN2, Length 1,374 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN2-204ENST00000404321 PTGES3Q15185 160 aaKnown RBP15.34■□□□□ 0.05
PTPRN2-204ENST00000404321 CXXC5Q7LFL8 322 aaKnown RBP15.34■□□□□ 0.05
PTPRN2-204ENST00000404321 PEG10Q86TG7 708 aaKnown RBP15.34■□□□□ 0.05
PTPRN2-204ENST00000404321 GLCCI1Q86VQ1 547 aa15.34■□□□□ 0.05
PTPRN2-204ENST00000404321 ZDHHC13Q8IUH4 622 aa15.34■□□□□ 0.05
PTPRN2-204ENST00000404321 PARP8Q8N3A8 854 aa15.34■□□□□ 0.05
PTPRN2-204ENST00000404321 ZNF420Q8TAQ5 688 aaPredicted RBP15.34■□□□□ 0.05
PTPRN2-204ENST00000404321 MEGF10Q96KG7 1140 aa15.34■□□□□ 0.05
PTPRN2-204ENST00000404321 MARCH7Q9H992 704 aa15.34■□□□□ 0.05
PTPRN2-204ENST00000404321 BRD7Q9NPI1 651 aa15.34■□□□□ 0.05
PTPRN2-204ENST00000404321 TMEFF2Q9UIK5 374 aaPredicted RBP15.34■□□□□ 0.05
PTPRN2-204ENST00000404321 SRD5A1P18405 259 aa15.33■□□□□ 0.04
PTPRN2-204ENST00000404321 EPHA2P29317 976 aa15.33■□□□□ 0.04
PTPRN2-204ENST00000404321 SLC15A1P46059 708 aa15.33■□□□□ 0.04
PTPRN2-204ENST00000404321 HCCSP53701 268 aa15.33■□□□□ 0.04
PTPRN2-204ENST00000404321 DVL1P1P54792 670 aaPredicted RBP15.33■□□□□ 0.04
PTPRN2-204ENST00000404321 GRB2P62993 217 aaKnown RBP15.33■□□□□ 0.04
PTPRN2-204ENST00000404321 APOFQ13790 326 aa15.33■□□□□ 0.04
PTPRN2-204ENST00000404321 SHFQ7M4L6 423 aa15.33■□□□□ 0.04
PTPRN2-204ENST00000404321 OR51F2Q8NH61 342 aa15.33■□□□□ 0.04
PTPRN2-204ENST00000404321 THEM6Q8WUY1 208 aa15.33■□□□□ 0.04
PTPRN2-204ENST00000404321 RNF133Q8WVZ7 376 aa15.33■□□□□ 0.04
PTPRN2-204ENST00000404321 PYDC1Q8WXC3 89 aa15.33■□□□□ 0.04
PTPRN2-204ENST00000404321 DUS3LQ96G46 650 aaKnown RBP15.33■□□□□ 0.04
PTPRN2-204ENST00000404321 GCM1Q9NP62 436 aa15.33■□□□□ 0.04
PTPRN2-204ENST00000404321 HIF1ANQ9NWT6 349 aa15.33■□□□□ 0.04
PTPRN2-204ENST00000404321 KLHDC2Q9Y2U9 406 aa15.33■□□□□ 0.04
PTPRN2-204ENST00000404321 NPTNQ9Y639 398 aa15.33■□□□□ 0.04
PTPRN2-204ENST00000404321 SVEP1Q4LDE5 3571 aa15.32■□□□□ 0.04
PTPRN2-204ENST00000404321 GGT3PA6NGU5 568 aa15.32■□□□□ 0.04
PTPRN2-204ENST00000404321 SAC3D1A6NKF1 404 aa15.32■□□□□ 0.04
PTPRN2-204ENST00000404321 CD300LBA8K4G0 201 aa15.32■□□□□ 0.04
PTPRN2-204ENST00000404321 PRODHO43272 600 aa15.32■□□□□ 0.04
PTPRN2-204ENST00000404321 PRKYO43930 277 aa15.32■□□□□ 0.04
PTPRN2-204ENST00000404321 ZNF205O95201 554 aa15.32■□□□□ 0.04
PTPRN2-204ENST00000404321 IGHV2-5P01817 119 aa15.32■□□□□ 0.04
PTPRN2-204ENST00000404321 MRPL3P09001 348 aaKnown RBP15.32■□□□□ 0.04
PTPRN2-204ENST00000404321 FCGR1AP12314 374 aa15.32■□□□□ 0.04
PTPRN2-204ENST00000404321 HNF1AP20823 631 aa15.32■□□□□ 0.04
PTPRN2-204ENST00000404321 SLC2A5P22732 501 aa15.32■□□□□ 0.04
PTPRN2-204ENST00000404321 CA6P23280 308 aa15.32■□□□□ 0.04
PTPRN2-204ENST00000404321 SRP9P49458 86 aaKnown RBP15.32■□□□□ 0.04
PTPRN2-204ENST00000404321 MMP16P51512 607 aa15.32■□□□□ 0.04
PTPRN2-204ENST00000404321 GFOD2Q3B7J2 385 aa15.32■□□□□ 0.04
PTPRN2-204ENST00000404321 FAM57BQ71RH2 274 aa15.32■□□□□ 0.04
PTPRN2-204ENST00000404321 BCDIN3DQ7Z5W3 292 aaKnown RBP15.32■□□□□ 0.04
PTPRN2-204ENST00000404321 MOGAT3Q86VF5 341 aa15.32■□□□□ 0.04
PTPRN2-204ENST00000404321 DVL3Q92997 716 aaPredicted RBP15.32■□□□□ 0.04
PTPRN2-204ENST00000404321 TMEM186Q96B77 213 aa15.32■□□□□ 0.04
PTPRN2-204ENST00000404321 RAB39BQ96DA2 213 aa15.32■□□□□ 0.04
PTPRN2-204ENST00000404321 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP15.32■□□□□ 0.04
PTPRN2-204ENST00000404321 PLPP2O43688 288 aa15.31■□□□□ 0.04
PTPRN2-204ENST00000404321 CYB5R3P00387 301 aaPredicted RBP15.31■□□□□ 0.04
PTPRN2-204ENST00000404321 IFNA2P01563 188 aa15.31■□□□□ 0.04
PTPRN2-204ENST00000404321 IGHV2-70P01814 119 aa15.31■□□□□ 0.04
PTPRN2-204ENST00000404321 H2BFMP0C1H6 154 aa15.31■□□□□ 0.04
PTPRN2-204ENST00000404321 OPRL1P41146 370 aa15.31■□□□□ 0.04
PTPRN2-204ENST00000404321 ESRRGP62508 458 aa15.31■□□□□ 0.04
PTPRN2-204ENST00000404321 KPNB1Q14974 876 aaKnown RBP15.31■□□□□ 0.04
PTPRN2-204ENST00000404321 OR8G1Q15617 311 aa15.31■□□□□ 0.04
PTPRN2-204ENST00000404321 OTOSQ8NHW6 89 aa15.31■□□□□ 0.04
PTPRN2-204ENST00000404321 SIGLEC11Q96RL6 698 aa15.31■□□□□ 0.04
PTPRN2-204ENST00000404321 MDFIQ99750 246 aa15.31■□□□□ 0.04
PTPRN2-204ENST00000404321 CIB1Q99828 191 aa15.31■□□□□ 0.04
PTPRN2-204ENST00000404321 REPIN1Q9BWE0 567 aaKnown RBP15.31■□□□□ 0.04
PTPRN2-204ENST00000404321 GABARAPL1Q9H0R8 117 aa15.31■□□□□ 0.04
PTPRN2-204ENST00000404321 OAZ3Q9UMX2 235 aa15.31■□□□□ 0.04
PTPRN2-204ENST00000404321 CCDC182A6NF36 153 aa15.3■□□□□ 0.04
PTPRN2-204ENST00000404321 LYNP07948 512 aa15.3■□□□□ 0.04
PTPRN2-204ENST00000404321 ZNF121P58317 390 aaPredicted RBP15.3■□□□□ 0.04
PTPRN2-204ENST00000404321 BTG1P62324 171 aa15.3■□□□□ 0.04
PTPRN2-204ENST00000404321 ZMYND11Q15326 602 aa15.3■□□□□ 0.04
PTPRN2-204ENST00000404321 SLC35D3Q5M8T2 416 aa15.3■□□□□ 0.04
PTPRN2-204ENST00000404321 PRAMEF6Q5VXH4 476 aa15.3■□□□□ 0.04
PTPRN2-204ENST00000404321 KDM4DQ6B0I6 523 aa15.3■□□□□ 0.04
PTPRN2-204ENST00000404321 FAHD2BQ6P2I3 314 aaPredicted RBP15.3■□□□□ 0.04
PTPRN2-204ENST00000404321 LRRN1Q6UXK5 716 aa15.3■□□□□ 0.04
PTPRN2-204ENST00000404321 HIST2H2ABQ8IUE6 130 aaPredicted RBP15.3■□□□□ 0.04
PTPRN2-204ENST00000404321 OR56B2PQ8NGI1 322 aa15.3■□□□□ 0.04
PTPRN2-204ENST00000404321 FAHD2AQ96GK7 314 aa15.3■□□□□ 0.04
PTPRN2-204ENST00000404321 CENPNQ96H22 339 aaPredicted RBP15.3■□□□□ 0.04
PTPRN2-204ENST00000404321 TOR3AQ9H497 397 aa15.3■□□□□ 0.04
PTPRN2-204ENST00000404321 PCDHB10Q9UN67 800 aa15.3■□□□□ 0.04
PTPRN2-204ENST00000404321 TMEM178BH3BS89 294 aa15.29■□□□□ 0.04
PTPRN2-204ENST00000404321 PSMD9O00233 223 aa15.29■□□□□ 0.04
PTPRN2-204ENST00000404321 POLR2IP36954 125 aaKnown RBP15.29■□□□□ 0.04
PTPRN2-204ENST00000404321 SRP14P37108 136 aaKnown RBP15.29■□□□□ 0.04
PTPRN2-204ENST00000404321 RAD23AP54725 363 aa15.29■□□□□ 0.04
PTPRN2-204ENST00000404321 ACTR3P61158 418 aa15.29■□□□□ 0.04
PTPRN2-204ENST00000404321 LCN2P80188 198 aa15.29■□□□□ 0.04
PTPRN2-204ENST00000404321 MAB21L1Q13394 359 aa15.29■□□□□ 0.04
PTPRN2-204ENST00000404321 TIGD6Q17RP2 521 aa15.29■□□□□ 0.04
PTPRN2-204ENST00000404321 FAM201AQ5SY85 155 aa15.29■□□□□ 0.04
PTPRN2-204ENST00000404321 SLX4IPQ5VYV7 408 aa15.29■□□□□ 0.04
PTPRN2-204ENST00000404321 PRSS45Q7RTY3 260 aa15.29■□□□□ 0.04
PTPRN2-204ENST00000404321 TCEANCQ8N8B7 351 aa15.29■□□□□ 0.04
PTPRN2-204ENST00000404321 ZNF454Q8N9F8 522 aa15.29■□□□□ 0.04
PTPRN2-204ENST00000404321 SGK3Q96BR1 496 aa15.29■□□□□ 0.04
PTPRN2-204ENST00000404321 TEAD3Q99594 435 aa15.29■□□□□ 0.04
PTPRN2-204ENST00000404321 PKP2Q99959 881 aa15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms