RNA–Protein interactions for RNA: ENST00000403890.7

NUP43-204, Transcript of nucleoporin 43, humanhuman

TSL 2

Gene NUP43, Length 1,012 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43-204ENST00000403890 SCG5P05408 212 aa7.49□□□□□ -1.21
NUP43-204ENST00000403890 ALDOCP09972 364 aaKnown RBP7.49□□□□□ -1.21
NUP43-204ENST00000403890 IDO1P14902 403 aa7.49□□□□□ -1.21
NUP43-204ENST00000403890 FUT1P19526 365 aa7.49□□□□□ -1.21
NUP43-204ENST00000403890 BGNP21810 368 aa7.49□□□□□ -1.21
NUP43-204ENST00000403890 BMXP51813 675 aa7.49□□□□□ -1.21
NUP43-204ENST00000403890 DGCR2P98153 550 aa7.49□□□□□ -1.21
NUP43-204ENST00000403890 CDK6Q00534 326 aa7.49□□□□□ -1.21
NUP43-204ENST00000403890 KRT71Q3SY84 523 aa7.49□□□□□ -1.21
NUP43-204ENST00000403890 ENTPD8Q5MY95 495 aa7.49□□□□□ -1.21
NUP43-204ENST00000403890 C6orf10Q5SRN2 563 aa7.49□□□□□ -1.21
NUP43-204ENST00000403890 BEND6Q5SZJ8 279 aaPredicted RBP7.49□□□□□ -1.21
NUP43-204ENST00000403890 CCDC121Q6ZUS5 278 aa7.49□□□□□ -1.21
NUP43-204ENST00000403890 OR1F12Q8NHA8 337 aa7.49□□□□□ -1.21
NUP43-204ENST00000403890 PIFOQ8TCI5 191 aa7.49□□□□□ -1.21
NUP43-204ENST00000403890 ADAMTS16Q8TE57 1224 aa7.49□□□□□ -1.21
NUP43-204ENST00000403890 AENQ8WTP8 325 aaKnown RBP7.49□□□□□ -1.21
NUP43-204ENST00000403890 AJUBAQ96IF1 538 aa7.49□□□□□ -1.21
NUP43-204ENST00000403890 CDCA4Q9BXL8 241 aa7.49□□□□□ -1.21
NUP43-204ENST00000403890 METTL8Q9H825 291 aaKnown RBP7.49□□□□□ -1.21
NUP43-204ENST00000403890 WDR76Q9H967 626 aa7.49□□□□□ -1.21
NUP43-204ENST00000403890 SSU72Q9NP77 194 aaKnown RBP7.49□□□□□ -1.21
NUP43-204ENST00000403890 EMC7Q9NPA0 242 aa7.49□□□□□ -1.21
NUP43-204ENST00000403890 MEPEQ9NQ76 525 aaPredicted RBP7.49□□□□□ -1.21
NUP43-204ENST00000403890 POLE4Q9NR33 117 aa7.49□□□□□ -1.21
NUP43-204ENST00000403890 PNPOQ9NVS9 261 aa7.49□□□□□ -1.21
NUP43-204ENST00000403890 SLC7A7Q9UM01 511 aa7.49□□□□□ -1.21
NUP43-204ENST00000403890 LSM4Q9Y4Z0 139 aaKnown RBP7.49□□□□□ -1.21
NUP43-204ENST00000403890 DNAH1Q9P2D7 4330 aa7.49□□□□□ -1.21
NUP43-204ENST00000403890 LYSTQ99698 3801 aa7.49□□□□□ -1.21
NUP43-204ENST00000403890 SACSQ9NZJ4 4579 aa7.48□□□□□ -1.21
NUP43-204ENST00000403890 TRBV23-1A0A0A0MS06 115 aa7.48□□□□□ -1.21
NUP43-204ENST00000403890 TCRBV4S1A1TA0A5B7 111 aa7.48□□□□□ -1.21
NUP43-204ENST00000403890 TRAPPC13A5PLN9 417 aa7.48□□□□□ -1.21
NUP43-204ENST00000403890 OR6C6A6NF89 314 aa7.48□□□□□ -1.21
NUP43-204ENST00000403890 M0R3H8 397 aa7.48□□□□□ -1.21
NUP43-204ENST00000403890 OR7A10O76100 309 aa7.48□□□□□ -1.21
NUP43-204ENST00000403890 PTBP3O95758 552 aaKnown RBP7.48□□□□□ -1.21
NUP43-204ENST00000403890 THY1P04216 161 aa7.48□□□□□ -1.21
NUP43-204ENST00000403890 DBHP09172 617 aa7.48□□□□□ -1.21
NUP43-204ENST00000403890 CCDC159P0C7I6 412 aa7.48□□□□□ -1.21
NUP43-204ENST00000403890 PAICSP22234 425 aaKnown RBP7.48□□□□□ -1.21
NUP43-204ENST00000403890 TOP3AQ13472 1001 aaPredicted RBP7.48□□□□□ -1.21
NUP43-204ENST00000403890 CNN3Q15417 329 aaKnown RBP7.48□□□□□ -1.21
NUP43-204ENST00000403890 OR8G1Q15617 311 aa7.48□□□□□ -1.21
NUP43-204ENST00000403890 NPTX1Q15818 432 aa7.48□□□□□ -1.21
NUP43-204ENST00000403890 SLC36A1Q7Z2H8 476 aa7.48□□□□□ -1.21
NUP43-204ENST00000403890 ARMC8Q8IUR7 673 aa7.48□□□□□ -1.21
NUP43-204ENST00000403890 LINC00482Q8N8I6 264 aa7.48□□□□□ -1.21
NUP43-204ENST00000403890 MOSPD2Q8NHP6 518 aa7.48□□□□□ -1.21
NUP43-204ENST00000403890 FAM46AQ96IP4 442 aaKnown RBP7.48□□□□□ -1.21
NUP43-204ENST00000403890 MCRIP2Q9BUT9 160 aaKnown RBP7.48□□□□□ -1.21
NUP43-204ENST00000403890 ZNF426Q9BUY5 554 aa7.48□□□□□ -1.21
NUP43-204ENST00000403890 TMEM109Q9BVC6 243 aa7.48□□□□□ -1.21
NUP43-204ENST00000403890 MUC13Q9H3R2 512 aa7.48□□□□□ -1.21
NUP43-204ENST00000403890 THAP1Q9NVV9 213 aa7.48□□□□□ -1.21
NUP43-204ENST00000403890 C1orf123Q9NWV4 160 aa7.48□□□□□ -1.21
NUP43-204ENST00000403890 NOP16Q9Y3C1 178 aaKnown RBP7.48□□□□□ -1.21
NUP43-204ENST00000403890 TSSC4Q9Y5U2 329 aaPredicted RBP7.48□□□□□ -1.21
NUP43-204ENST00000403890 IGHV3OR15-7A0A075B7D8 119 aa7.47□□□□□ -1.21
NUP43-204ENST00000403890 A0A1B0GW55 424 aa7.47□□□□□ -1.21
NUP43-204ENST00000403890 M0R1W7 72 aa7.47□□□□□ -1.21
NUP43-204ENST00000403890 F2RL2O00254 374 aa7.47□□□□□ -1.21
NUP43-204ENST00000403890 NDUFB3O43676 98 aa7.47□□□□□ -1.21
NUP43-204ENST00000403890 SYNGR1O43759 233 aa7.47□□□□□ -1.21
NUP43-204ENST00000403890 RAMP3O60896 148 aa7.47□□□□□ -1.21
NUP43-204ENST00000403890 MT-ND1P03886 318 aa7.47□□□□□ -1.21
NUP43-204ENST00000403890 ALDOBP05062 364 aa7.47□□□□□ -1.21
NUP43-204ENST00000403890 TSPAN19P0C672 248 aa7.47□□□□□ -1.21
NUP43-204ENST00000403890 DUX4L2P0CJ85 424 aa7.47□□□□□ -1.21
NUP43-204ENST00000403890 DUX4L3P0CJ86 424 aa7.47□□□□□ -1.21
NUP43-204ENST00000403890 DUX4L4P0CJ87 422 aa7.47□□□□□ -1.21
NUP43-204ENST00000403890 DUX4L5P0CJ88 424 aa7.47□□□□□ -1.21
NUP43-204ENST00000403890 DUX4L6P0CJ89 424 aa7.47□□□□□ -1.21
NUP43-204ENST00000403890 DUX4L7P0CJ90 424 aa7.47□□□□□ -1.21
NUP43-204ENST00000403890 KITP10721 976 aa7.47□□□□□ -1.21
NUP43-204ENST00000403890 PAX6P26367 422 aa7.47□□□□□ -1.21
NUP43-204ENST00000403890 AQP1P29972 269 aa7.47□□□□□ -1.21
NUP43-204ENST00000403890 VDAC2P45880 294 aaPredicted RBP7.47□□□□□ -1.21
NUP43-204ENST00000403890 RPL27P61353 136 aaKnown RBP7.47□□□□□ -1.21
NUP43-204ENST00000403890 AQP6Q13520 282 aa7.47□□□□□ -1.21
NUP43-204ENST00000403890 BLMHQ13867 455 aa7.47□□□□□ -1.21
NUP43-204ENST00000403890 MICBQ29980 383 aa7.47□□□□□ -1.21
NUP43-204ENST00000403890 TCTEX1D4Q5JR98 221 aa7.47□□□□□ -1.21
NUP43-204ENST00000403890 GCNT6Q5T4J0 391 aa7.47□□□□□ -1.21
NUP43-204ENST00000403890 TEX36Q5VZQ5 186 aa7.47□□□□□ -1.21
NUP43-204ENST00000403890 DUX4L9Q6RFH8 374 aaPredicted RBP7.47□□□□□ -1.21
NUP43-204ENST00000403890 MSANTD1Q6ZTZ1 278 aa7.47□□□□□ -1.21
NUP43-204ENST00000403890 GCSAMQ8N6F7 178 aa7.47□□□□□ -1.21
NUP43-204ENST00000403890 OR6T1Q8NGN1 323 aa7.47□□□□□ -1.21
NUP43-204ENST00000403890 LRRC8CQ8TDW0 803 aa7.47□□□□□ -1.21
NUP43-204ENST00000403890 SPRYD4Q8WW59 207 aaPredicted RBP7.47□□□□□ -1.21
NUP43-204ENST00000403890 TFAP2CQ92754 450 aa7.47□□□□□ -1.21
NUP43-204ENST00000403890 SORT1Q99523 831 aa7.47□□□□□ -1.21
NUP43-204ENST00000403890 CCL13Q99616 98 aa7.47□□□□□ -1.21
NUP43-204ENST00000403890 C20orf27Q9GZN8 174 aa7.47□□□□□ -1.21
NUP43-204ENST00000403890 SLC22A4Q9H015 551 aa7.47□□□□□ -1.21
NUP43-204ENST00000403890 ZIM2Q9NZV7 527 aa7.47□□□□□ -1.21
NUP43-204ENST00000403890 DUX4Q9UBX2 424 aa7.47□□□□□ -1.21
NUP43-204ENST00000403890 ATPIF1Q9UII2 106 aa7.47□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms