RNA–Protein interactions for RNA: ENST00000400060.8

PTPRM-203, Transcript of protein tyrosine phosphatase, receptor type M, humanhuman

TSL 5 BASIC

Gene PTPRM, Length 5,030 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRM-203ENST00000400060 MRPL2Q5T653 305 aaKnown RBP9.05□□□□□ -0.96
PTPRM-203ENST00000400060 DCAF12L2Q5VW00 463 aa9.05□□□□□ -0.96
PTPRM-203ENST00000400060 ZNF511Q8NB15 262 aa9.05□□□□□ -0.96
PTPRM-203ENST00000400060 SH3RF2Q8TEC5 729 aa9.05□□□□□ -0.96
PTPRM-203ENST00000400060 ZNF480Q8WV37 535 aa9.05□□□□□ -0.96
PTPRM-203ENST00000400060 TMEM40Q8WWA1 233 aa9.05□□□□□ -0.96
PTPRM-203ENST00000400060 ANKRD9Q96BM1 317 aaPredicted RBP9.05□□□□□ -0.96
PTPRM-203ENST00000400060 MS4A6EQ96DS6 147 aa9.05□□□□□ -0.96
PTPRM-203ENST00000400060 ELOVL1Q9BW60 279 aa9.05□□□□□ -0.96
PTPRM-203ENST00000400060 FOXJ2Q9P0K8 574 aa9.05□□□□□ -0.96
PTPRM-203ENST00000400060 TP53I11O14683 189 aa9.04□□□□□ -0.96
PTPRM-203ENST00000400060 B3GALT4O96024 378 aa9.04□□□□□ -0.96
PTPRM-203ENST00000400060 PGCP20142 388 aa9.04□□□□□ -0.96
PTPRM-203ENST00000400060 PTNP21246 168 aa9.04□□□□□ -0.96
PTPRM-203ENST00000400060 ZNF92Q03936 586 aa9.04□□□□□ -0.96
PTPRM-203ENST00000400060 MESTQ5EB52 335 aa9.04□□□□□ -0.96
PTPRM-203ENST00000400060 ZNF439Q8NDP4 499 aa9.04□□□□□ -0.96
PTPRM-203ENST00000400060 OR2T10Q8NGZ9 312 aa9.04□□□□□ -0.96
PTPRM-203ENST00000400060 PTX4Q96A99 478 aa9.04□□□□□ -0.96
PTPRM-203ENST00000400060 SEH1LQ96EE3 360 aa9.04□□□□□ -0.96
PTPRM-203ENST00000400060 GLIPR2Q9H4G4 154 aa9.04□□□□□ -0.96
PTPRM-203ENST00000400060 PIAS3Q9Y6X2 628 aa9.04□□□□□ -0.96
PTPRM-203ENST00000400060 GLI3P10071 1580 aa9.04□□□□□ -0.96
PTPRM-203ENST00000400060 DMRTA1Q5VZB9 504 aa9.04□□□□□ -0.96
PTPRM-203ENST00000400060 WDR73Q6P4I2 378 aa9.04□□□□□ -0.96
PTPRM-203ENST00000400060 LANCL3Q6ZV70 420 aa9.04□□□□□ -0.96
PTPRM-203ENST00000400060 ZSCAN4Q8NAM6 433 aaPredicted RBP9.04□□□□□ -0.96
PTPRM-203ENST00000400060 NUDT9Q9BW91 350 aa9.04□□□□□ -0.96
PTPRM-203ENST00000400060 LHX3Q9UBR4 397 aa9.04□□□□□ -0.96
PTPRM-203ENST00000400060 A0A087WV62 115 aa9.04□□□□□ -0.96
PTPRM-203ENST00000400060 A0A0U1RQK1 487 aa9.04□□□□□ -0.96
PTPRM-203ENST00000400060 ZNF320A2RRD8 509 aa9.04□□□□□ -0.96
PTPRM-203ENST00000400060 ZBTB42B2RXF5 422 aa9.04□□□□□ -0.96
PTPRM-203ENST00000400060 K7ERQ8 282 aa9.04□□□□□ -0.96
PTPRM-203ENST00000400060 CYR61O00622 381 aa9.04□□□□□ -0.96
PTPRM-203ENST00000400060 HOXD9P28356 352 aaPredicted RBP9.04□□□□□ -0.96
PTPRM-203ENST00000400060 WASP42768 502 aa9.04□□□□□ -0.96
PTPRM-203ENST00000400060 H2BFSP57053 126 aa9.04□□□□□ -0.96
PTPRM-203ENST00000400060 ZNF85Q03923 595 aa9.04□□□□□ -0.96
PTPRM-203ENST00000400060 SRSF5Q13243 272 aaKnown RBP9.04□□□□□ -0.96
PTPRM-203ENST00000400060 RAB31Q13636 194 aa9.04□□□□□ -0.96
PTPRM-203ENST00000400060 RAB32Q13637 225 aa9.04□□□□□ -0.96
PTPRM-203ENST00000400060 JOSD1Q15040 202 aaPredicted RBP9.04□□□□□ -0.96
PTPRM-203ENST00000400060 PRRT3Q5FWE3 981 aa9.04□□□□□ -0.96
PTPRM-203ENST00000400060 SLC36A1Q7Z2H8 476 aa9.04□□□□□ -0.96
PTPRM-203ENST00000400060 RNF175Q8N4F7 328 aa9.04□□□□□ -0.96
PTPRM-203ENST00000400060 RASD2Q96D21 266 aa9.04□□□□□ -0.96
PTPRM-203ENST00000400060 PELI1Q96FA3 418 aa9.04□□□□□ -0.96
PTPRM-203ENST00000400060 ZNF845Q96IR2 970 aaPredicted RBP9.04□□□□□ -0.96
PTPRM-203ENST00000400060 HIST1H2AAQ96QV6 131 aa9.04□□□□□ -0.96
PTPRM-203ENST00000400060 PEX12O00623 359 aa9.04□□□□□ -0.96
PTPRM-203ENST00000400060 WDR1O75083 606 aa9.04□□□□□ -0.96
PTPRM-203ENST00000400060 ZNF865P0CJ78 1059 aaPredicted RBP9.04□□□□□ -0.96
PTPRM-203ENST00000400060 GLIPR1P48060 266 aa9.04□□□□□ -0.96
PTPRM-203ENST00000400060 SLC25A1P53007 311 aa9.04□□□□□ -0.96
PTPRM-203ENST00000400060 TXNDC8Q6A555 127 aa9.04□□□□□ -0.96
PTPRM-203ENST00000400060 TMEM184AQ6ZMB5 413 aa9.04□□□□□ -0.96
PTPRM-203ENST00000400060 MORN4Q8NDC4 146 aa9.04□□□□□ -0.96
PTPRM-203ENST00000400060 ZNF681Q96N22 645 aa9.04□□□□□ -0.96
PTPRM-203ENST00000400060 TBX15Q96SF7 602 aa9.04□□□□□ -0.96
PTPRM-203ENST00000400060 LAT2Q9GZY6 243 aa9.04□□□□□ -0.96
PTPRM-203ENST00000400060 PARP12Q9H0J9 701 aaKnown RBP9.04□□□□□ -0.96
PTPRM-203ENST00000400060 CLDND1Q9NY35 253 aa9.04□□□□□ -0.96
PTPRM-203ENST00000400060 ANKRD12Q6UB98 2062 aa9.03□□□□□ -0.96
PTPRM-203ENST00000400060 INSL4Q14641 139 aa9.03□□□□□ -0.96
PTPRM-203ENST00000400060 EXOSC6Q5RKV6 272 aaKnown RBP9.03□□□□□ -0.96
PTPRM-203ENST00000400060 POMZP3Q6PJE2 187 aa9.03□□□□□ -0.96
PTPRM-203ENST00000400060 DHRS11Q6UWP2 260 aa9.03□□□□□ -0.96
PTPRM-203ENST00000400060 SYT13Q7L8C5 426 aa9.03□□□□□ -0.96
PTPRM-203ENST00000400060 GPR32P1Q8NGA4 272 aa9.03□□□□□ -0.96
PTPRM-203ENST00000400060 RPS4Y2Q8TD47 263 aa9.03□□□□□ -0.96
PTPRM-203ENST00000400060 PGAM5Q96HS1 289 aa9.03□□□□□ -0.96
PTPRM-203ENST00000400060 OR10A5Q9H207 317 aa9.03□□□□□ -0.96
PTPRM-203ENST00000400060 RPH3ALQ9UNE2 315 aa9.03□□□□□ -0.96
PTPRM-203ENST00000400060 LHX6Q9UPM6 363 aa9.03□□□□□ -0.96
PTPRM-203ENST00000400060 TAF1LQ8IZX4 1826 aa9.03□□□□□ -0.96
PTPRM-203ENST00000400060 APODP05090 189 aa9.03□□□□□ -0.96
PTPRM-203ENST00000400060 SERPINE2P07093 398 aa9.03□□□□□ -0.96
PTPRM-203ENST00000400060 KRTDAPP60985 99 aa9.03□□□□□ -0.96
PTPRM-203ENST00000400060 GUCA2AQ02747 115 aa9.03□□□□□ -0.96
PTPRM-203ENST00000400060 BAXQ07812 192 aa9.03□□□□□ -0.96
PTPRM-203ENST00000400060 MEX3BQ6ZN04 569 aaKnown RBP9.03□□□□□ -0.96
PTPRM-203ENST00000400060 CISD2Q8N5K1 135 aaKnown RBP9.03□□□□□ -0.96
PTPRM-203ENST00000400060 CLEC1AQ8NC01 280 aa9.03□□□□□ -0.96
PTPRM-203ENST00000400060 PDFQ9HBH1 243 aa9.03□□□□□ -0.96
PTPRM-203ENST00000400060 CLDN16Q9Y5I7 305 aa9.03□□□□□ -0.96
PTPRM-203ENST00000400060 TMEM272A0A1B0GTI8 110 aa9.03□□□□□ -0.96
PTPRM-203ENST00000400060 A0A1W2PPV4 95 aa9.03□□□□□ -0.96
PTPRM-203ENST00000400060 APOA2P02652 100 aa9.03□□□□□ -0.96
PTPRM-203ENST00000400060 TRGC2P03986 189 aa9.03□□□□□ -0.96
PTPRM-203ENST00000400060 BTF3P20290 206 aaKnown RBP9.03□□□□□ -0.96
PTPRM-203ENST00000400060 PPP2CBP62714 309 aa9.03□□□□□ -0.96
PTPRM-203ENST00000400060 PPP2CAP67775 309 aa9.03□□□□□ -0.96
PTPRM-203ENST00000400060 CNN3Q15417 329 aaKnown RBP9.03□□□□□ -0.96
PTPRM-203ENST00000400060 BRICD5Q6PL45 260 aa9.03□□□□□ -0.96
PTPRM-203ENST00000400060 OR5AU1Q8NGC0 362 aa9.03□□□□□ -0.96
PTPRM-203ENST00000400060 DIO2Q92813 273 aa9.03□□□□□ -0.96
PTPRM-203ENST00000400060 ARSGQ96EG1 525 aa9.03□□□□□ -0.96
PTPRM-203ENST00000400060 KCNK6Q9Y257 313 aa9.03□□□□□ -0.96
PTPRM-203ENST00000400060 TMEM269A0A1B0GVZ9 245 aa9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms