RNA–Protein interactions for RNA: ENST00000399256.4

APOB-202, Transcript of apolipoprotein B, humanhuman

TSL 1 (best) BASIC

Gene APOB, Length 3,128 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOB-202ENST00000399256 TMEM128Q5BJH2 165 aa12.46□□□□□ -0.41
APOB-202ENST00000399256 ZNF542PQ5EBM4 170 aa12.46□□□□□ -0.41
APOB-202ENST00000399256 RNF144BQ7Z419 303 aa12.46□□□□□ -0.41
APOB-202ENST00000399256 FRMD1Q8N878 549 aa12.46□□□□□ -0.41
APOB-202ENST00000399256 SPACA5Q96QH8 159 aa12.46□□□□□ -0.41
APOB-202ENST00000399256 CDC6Q99741 560 aa12.46□□□□□ -0.41
APOB-202ENST00000399256 SLC5A7Q9GZV3 580 aa12.46□□□□□ -0.41
APOB-202ENST00000399256 ADAM19Q9H013 955 aa12.46□□□□□ -0.41
APOB-202ENST00000399256 TCEAL2Q9H3H9 227 aaPredicted RBP12.46□□□□□ -0.41
APOB-202ENST00000399256 C5orf66Q9H5L9 145 aa12.46□□□□□ -0.41
APOB-202ENST00000399256 METTL8Q9H825 291 aaKnown RBP12.46□□□□□ -0.41
APOB-202ENST00000399256 DZANK1Q9NVP4 752 aa12.46□□□□□ -0.41
APOB-202ENST00000399256 WIF1Q9Y5W5 379 aa12.46□□□□□ -0.41
APOB-202ENST00000399256 CDC14CA4D256 554 aa12.46□□□□□ -0.41
APOB-202ENST00000399256 C17orf105B2RV13 164 aa12.46□□□□□ -0.41
APOB-202ENST00000399256 SLC6A9P48067 706 aa12.46□□□□□ -0.41
APOB-202ENST00000399256 FMODQ06828 376 aa12.46□□□□□ -0.41
APOB-202ENST00000399256 ANKRD55Q3KP44 614 aa12.46□□□□□ -0.41
APOB-202ENST00000399256 ARHGEF39Q8N4T4 335 aa12.46□□□□□ -0.41
APOB-202ENST00000399256 NECAB3Q96P71 396 aaPredicted RBP12.46□□□□□ -0.41
APOB-202ENST00000399256 TAF9BQ9HBM6 251 aa12.46□□□□□ -0.41
APOB-202ENST00000399256 SLC5A6Q9Y289 635 aa12.46□□□□□ -0.41
APOB-202ENST00000399256 FLVCR1Q9Y5Y0 555 aa12.46□□□□□ -0.41
APOB-202ENST00000399256 S100A8P05109 93 aa12.46□□□□□ -0.42
APOB-202ENST00000399256 IGLV3-21P80748 117 aaPredicted RBP12.46□□□□□ -0.42
APOB-202ENST00000399256 TFF2Q03403 129 aa12.46□□□□□ -0.42
APOB-202ENST00000399256 HYAL1Q12794 435 aa12.46□□□□□ -0.42
APOB-202ENST00000399256 YAF2Q8IY57 180 aa12.46□□□□□ -0.42
APOB-202ENST00000399256 TERB2Q8NHR7 220 aa12.46□□□□□ -0.42
APOB-202ENST00000399256 SLC37A2Q8TED4 501 aa12.46□□□□□ -0.42
APOB-202ENST00000399256 SAT2Q96F10 170 aaPredicted RBP12.46□□□□□ -0.42
APOB-202ENST00000399256 GAL3ST4Q96RP7 486 aa12.46□□□□□ -0.42
APOB-202ENST00000399256 GAS2L1Q99501 681 aaPredicted RBP12.46□□□□□ -0.42
APOB-202ENST00000399256 NRSN2Q9GZP1 204 aa12.46□□□□□ -0.42
APOB-202ENST00000399256 PARP12Q9H0J9 701 aaKnown RBP12.46□□□□□ -0.42
APOB-202ENST00000399256 PNO1Q9NRX1 252 aaKnown RBP12.46□□□□□ -0.42
APOB-202ENST00000399256 VSX1Q9NZR4 365 aaPredicted RBP12.46□□□□□ -0.42
APOB-202ENST00000399256 PRODH2Q9UF12 536 aa12.46□□□□□ -0.42
APOB-202ENST00000399256 VCANP13611 3396 aa12.45□□□□□ -0.42
APOB-202ENST00000399256 TRBV23-1A0A0A0MS06 115 aa12.45□□□□□ -0.42
APOB-202ENST00000399256 LINC01565O15544 149 aa12.45□□□□□ -0.42
APOB-202ENST00000399256 IL33O95760 270 aa12.45□□□□□ -0.42
APOB-202ENST00000399256 HLA-DOBP13765 273 aa12.45□□□□□ -0.42
APOB-202ENST00000399256 COL9A1P20849 921 aa12.45□□□□□ -0.42
APOB-202ENST00000399256 GLO1Q04760 184 aa12.45□□□□□ -0.42
APOB-202ENST00000399256 FABP9Q0Z7S8 132 aa12.45□□□□□ -0.42
APOB-202ENST00000399256 TMEM196Q5HYL7 178 aa12.45□□□□□ -0.42
APOB-202ENST00000399256 AWAT2Q6E213 333 aa12.45□□□□□ -0.42
APOB-202ENST00000399256 C15orf54Q8N8G6 183 aa12.45□□□□□ -0.42
APOB-202ENST00000399256 OR13C9Q8NGT0 318 aa12.45□□□□□ -0.42
APOB-202ENST00000399256 SECTM1Q8WVN6 248 aa12.45□□□□□ -0.42
APOB-202ENST00000399256 ISOC2Q96AB3 205 aa12.45□□□□□ -0.42
APOB-202ENST00000399256 MMABQ96EY8 250 aaPredicted RBP12.45□□□□□ -0.42
APOB-202ENST00000399256 AQP10Q96PS8 301 aa12.45□□□□□ -0.42
APOB-202ENST00000399256 FOXQ1Q9C009 403 aa12.45□□□□□ -0.42
APOB-202ENST00000399256 TXNIPQ9H3M7 391 aa12.45□□□□□ -0.42
APOB-202ENST00000399256 SZT2Q5T011 3432 aa12.45□□□□□ -0.42
APOB-202ENST00000399256 PRAMEF26H0Y7S4 382 aa12.45□□□□□ -0.42
APOB-202ENST00000399256 UBE2CO00762 179 aa12.45□□□□□ -0.42
APOB-202ENST00000399256 SFT2D2O95562 160 aa12.45□□□□□ -0.42
APOB-202ENST00000399256 CSTBP04080 98 aaKnown RBP12.45□□□□□ -0.42
APOB-202ENST00000399256 QRFPP83859 136 aa12.45□□□□□ -0.42
APOB-202ENST00000399256 SGCBQ16585 318 aa12.45□□□□□ -0.42
APOB-202ENST00000399256 ZNF101Q8IZC7 436 aa12.45□□□□□ -0.42
APOB-202ENST00000399256 ZNF775Q96BV0 537 aaPredicted RBP12.45□□□□□ -0.42
APOB-202ENST00000399256 ADAT3Q96EY9 351 aaPredicted RBP12.45□□□□□ -0.42
APOB-202ENST00000399256 KIRREL1Q96J84 757 aa12.45□□□□□ -0.42
APOB-202ENST00000399256 OR11A1Q9GZK7 315 aa12.45□□□□□ -0.42
APOB-202ENST00000399256 TXNL1O43396 289 aa12.44□□□□□ -0.42
APOB-202ENST00000399256 CD5P06127 495 aa12.44□□□□□ -0.42
APOB-202ENST00000399256 FCGR3AP08637 254 aa12.44□□□□□ -0.42
APOB-202ENST00000399256 ZNF823P16415 610 aa12.44□□□□□ -0.42
APOB-202ENST00000399256 EMP2P54851 167 aa12.44□□□□□ -0.42
APOB-202ENST00000399256 ZNF704Q6ZNC4 412 aaPredicted RBP12.44□□□□□ -0.42
APOB-202ENST00000399256 DTWD2Q8NBA8 298 aa12.44□□□□□ -0.42
APOB-202ENST00000399256 OR8D2Q9GZM6 311 aa12.44□□□□□ -0.42
APOB-202ENST00000399256 RAB18Q9NP72 206 aa12.44□□□□□ -0.42
APOB-202ENST00000399256 PLA2G2EQ9NZK7 142 aa12.44□□□□□ -0.42
APOB-202ENST00000399256 GHRLQ9UBU3 117 aa12.44□□□□□ -0.42
APOB-202ENST00000399256 MIOXQ9UGB7 285 aa12.44□□□□□ -0.42
APOB-202ENST00000399256 CACFD1Q9UGQ2 172 aa12.44□□□□□ -0.42
APOB-202ENST00000399256 A6NLC8 198 aa12.44□□□□□ -0.42
APOB-202ENST00000399256 ZNF217O75362 1048 aa12.44□□□□□ -0.42
APOB-202ENST00000399256 SNRNP70P08621 437 aaKnown RBP12.44□□□□□ -0.42
APOB-202ENST00000399256 HOXB5P09067 269 aa12.44□□□□□ -0.42
APOB-202ENST00000399256 OR8U9P0C7N5 309 aa12.44□□□□□ -0.42
APOB-202ENST00000399256 KIR2DL1P43626 348 aaPredicted RBP12.44□□□□□ -0.42
APOB-202ENST00000399256 KRBOX4Q5JUW0 171 aa12.44□□□□□ -0.42
APOB-202ENST00000399256 TMEM244Q5VVB8 128 aa12.44□□□□□ -0.42
APOB-202ENST00000399256 Q6ZRG5 221 aa12.44□□□□□ -0.42
APOB-202ENST00000399256 HIST2H2ABQ8IUE6 130 aaPredicted RBP12.44□□□□□ -0.42
APOB-202ENST00000399256 OR8U1Q8NH10 309 aa12.44□□□□□ -0.42
APOB-202ENST00000399256 RSRP1Q9BUV0 290 aa12.44□□□□□ -0.42
APOB-202ENST00000399256 GPR132Q9UNW8 380 aa12.44□□□□□ -0.42
APOB-202ENST00000399256 TMEM184BQ9Y519 407 aaPredicted RBP12.44□□□□□ -0.42
APOB-202ENST00000399256 EIF1BO60739 113 aaKnown RBP12.44□□□□□ -0.42
APOB-202ENST00000399256 HTR3BO95264 441 aa12.44□□□□□ -0.42
APOB-202ENST00000399256 ISG15P05161 165 aa12.44□□□□□ -0.42
APOB-202ENST00000399256 SFTPBP07988 381 aa12.44□□□□□ -0.42
APOB-202ENST00000399256 DAOP14920 347 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms