RNA–Protein interactions for RNA: ENST00000399127.5

COL25A1-202, Transcript of collagen type XXV alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL25A1, Length 2,500 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1-202ENST00000399127 TTRP02766 147 aa10.42□□□□□ -0.74
COL25A1-202ENST00000399127 HTR2CP28335 458 aa10.42□□□□□ -0.74
COL25A1-202ENST00000399127 DSCR4P56555 118 aaPredicted RBP10.42□□□□□ -0.74
COL25A1-202ENST00000399127 CSRP2Q16527 193 aa10.42□□□□□ -0.74
COL25A1-202ENST00000399127 C21orf62-AS1Q17RA5 79 aa10.42□□□□□ -0.74
COL25A1-202ENST00000399127 GFOD2Q3B7J2 385 aa10.42□□□□□ -0.74
COL25A1-202ENST00000399127 HES3Q5TGS1 186 aa10.42□□□□□ -0.74
COL25A1-202ENST00000399127 ANKRD16Q6P6B7 361 aa10.42□□□□□ -0.74
COL25A1-202ENST00000399127 CHMP1BQ7LBR1 199 aa10.42□□□□□ -0.74
COL25A1-202ENST00000399127 OVCH2Q7RTZ1 564 aa10.42□□□□□ -0.74
COL25A1-202ENST00000399127 ADPRHL1Q8NDY3 354 aa10.42□□□□□ -0.74
COL25A1-202ENST00000399127 OR2AJ1Q8NGZ0 328 aa10.42□□□□□ -0.74
COL25A1-202ENST00000399127 SCMH1Q96GD3 660 aa10.42□□□□□ -0.74
COL25A1-202ENST00000399127 ZNF385AQ96PM9 386 aaKnown RBP10.42□□□□□ -0.74
COL25A1-202ENST00000399127 SORCS2Q96PQ0 1159 aa10.42□□□□□ -0.74
COL25A1-202ENST00000399127 SOX7Q9BT81 388 aa10.42□□□□□ -0.74
COL25A1-202ENST00000399127 PBOV1Q9GZY1 135 aa10.42□□□□□ -0.74
COL25A1-202ENST00000399127 PLEKHA1Q9HB21 404 aa10.42□□□□□ -0.74
COL25A1-202ENST00000399127 SH2D2AQ9NP31 389 aa10.42□□□□□ -0.74
COL25A1-202ENST00000399127 SDHAF2Q9NX18 166 aa10.42□□□□□ -0.74
COL25A1-202ENST00000399127 ZNF222Q9UK12 451 aa10.42□□□□□ -0.74
COL25A1-202ENST00000399127 MGAT4AQ9UM21 535 aa10.42□□□□□ -0.74
COL25A1-202ENST00000399127 DOCK10Q96BY6 2186 aa10.41□□□□□ -0.74
COL25A1-202ENST00000399127 NCOA6Q14686 2063 aaPredicted RBP10.41□□□□□ -0.74
COL25A1-202ENST00000399127 LOC100289279A0A1B0GTE1 492 aa10.41□□□□□ -0.74
COL25A1-202ENST00000399127 ACOT7O00154 380 aa10.41□□□□□ -0.74
COL25A1-202ENST00000399127 ALDOBP05062 364 aa10.41□□□□□ -0.74
COL25A1-202ENST00000399127 IGFBP3P17936 291 aaPredicted RBP10.41□□□□□ -0.74
COL25A1-202ENST00000399127 CXCL3P19876 107 aa10.41□□□□□ -0.74
COL25A1-202ENST00000399127 ACHEP22303 614 aa10.41□□□□□ -0.74
COL25A1-202ENST00000399127 HSD11B1P28845 292 aa10.41□□□□□ -0.74
COL25A1-202ENST00000399127 VEGFCP49767 419 aa10.41□□□□□ -0.74
COL25A1-202ENST00000399127 RAB13P51153 203 aa10.41□□□□□ -0.74
COL25A1-202ENST00000399127 MMP16P51512 607 aa10.41□□□□□ -0.74
COL25A1-202ENST00000399127 TAF13Q15543 124 aa10.41□□□□□ -0.74
COL25A1-202ENST00000399127 TSC22D1Q15714 1073 aa10.41□□□□□ -0.74
COL25A1-202ENST00000399127 GSG1Q2KHT4 349 aa10.41□□□□□ -0.74
COL25A1-202ENST00000399127 GLT8D1Q68CQ7 371 aa10.41□□□□□ -0.74
COL25A1-202ENST00000399127 COMMD2Q86X83 199 aa10.41□□□□□ -0.74
COL25A1-202ENST00000399127 DEFB124Q8NES8 71 aa10.41□□□□□ -0.74
COL25A1-202ENST00000399127 PRSS33Q8NF86 280 aa10.41□□□□□ -0.74
COL25A1-202ENST00000399127 OR11H7Q8NGC8 314 aa10.41□□□□□ -0.74
COL25A1-202ENST00000399127 OR51E1Q8TCB6 317 aa10.41□□□□□ -0.74
COL25A1-202ENST00000399127 THRSPQ92748 146 aa10.41□□□□□ -0.74
COL25A1-202ENST00000399127 REG4Q9BYZ8 158 aa10.41□□□□□ -0.74
COL25A1-202ENST00000399127 OR51J1Q9H342 316 aa10.41□□□□□ -0.74
COL25A1-202ENST00000399127 ZMAT3Q9HA38 289 aaKnown RBP10.41□□□□□ -0.74
COL25A1-202ENST00000399127 FOXJ2Q9P0K8 574 aa10.41□□□□□ -0.74
COL25A1-202ENST00000399127 PCSK5Q92824 1860 aa10.41□□□□□ -0.74
COL25A1-202ENST00000399127 ZFHX4Q86UP3 3567 aa10.41□□□□□ -0.74
COL25A1-202ENST00000399127 NCKAP5O14513 1909 aa10.41□□□□□ -0.74
COL25A1-202ENST00000399127 A0A087WZY1 265 aa10.41□□□□□ -0.74
COL25A1-202ENST00000399127 A0A1W2PNU3 283 aaPredicted RBP10.41□□□□□ -0.74
COL25A1-202ENST00000399127 SYT7O43581 403 aa10.41□□□□□ -0.74
COL25A1-202ENST00000399127 EIF1BO60739 113 aaKnown RBP10.41□□□□□ -0.74
COL25A1-202ENST00000399127 TMEM127O75204 238 aa10.41□□□□□ -0.74
COL25A1-202ENST00000399127 ISG15P05161 165 aa10.41□□□□□ -0.74
COL25A1-202ENST00000399127 RFPL3SP0C7P2 107 aa10.41□□□□□ -0.74
COL25A1-202ENST00000399127 UBCP0CG48 685 aaKnown RBP10.41□□□□□ -0.74
COL25A1-202ENST00000399127 NUBP1P53384 320 aa10.41□□□□□ -0.74
COL25A1-202ENST00000399127 H3F3AP84243 136 aa10.41□□□□□ -0.74
COL25A1-202ENST00000399127 ST3GAL2Q16842 350 aa10.41□□□□□ -0.74
COL25A1-202ENST00000399127 PCGF3Q3KNV8 242 aa10.41□□□□□ -0.74
COL25A1-202ENST00000399127 DMRTC1Q5HYR2 192 aa10.41□□□□□ -0.74
COL25A1-202ENST00000399127 PHYHD1Q5SRE7 291 aa10.41□□□□□ -0.74
COL25A1-202ENST00000399127 TMEM244Q5VVB8 128 aa10.41□□□□□ -0.74
COL25A1-202ENST00000399127 FAM166AQ6J272 317 aa10.41□□□□□ -0.74
COL25A1-202ENST00000399127 SLC25A47Q6Q0C1 308 aa10.41□□□□□ -0.74
COL25A1-202ENST00000399127 DEGS2Q6QHC5 323 aa10.41□□□□□ -0.74
COL25A1-202ENST00000399127 BTN2A1Q7KYR7 527 aa10.41□□□□□ -0.74
COL25A1-202ENST00000399127 OR6N1Q8NGY5 312 aa10.41□□□□□ -0.74
COL25A1-202ENST00000399127 SLC25A28Q96A46 364 aa10.41□□□□□ -0.74
COL25A1-202ENST00000399127 ADAT3Q96EY9 351 aaPredicted RBP10.41□□□□□ -0.74
COL25A1-202ENST00000399127 C7orf50Q9BRJ6 194 aaKnown RBP10.41□□□□□ -0.74
COL25A1-202ENST00000399127 EP300Q09472 2414 aaPredicted RBP10.4□□□□□ -0.74
COL25A1-202ENST00000399127 TRBV23-1A0A0A0MS06 115 aa10.4□□□□□ -0.74
COL25A1-202ENST00000399127 A0A0J9YW62 118 aa10.4□□□□□ -0.74
COL25A1-202ENST00000399127 ANKRD20A5PA0PJZ0 165 aa10.4□□□□□ -0.74
COL25A1-202ENST00000399127 C7orf66A4D0T2 115 aa10.4□□□□□ -0.74
COL25A1-202ENST00000399127 MFSD2BA6NFX1 497 aa10.4□□□□□ -0.74
COL25A1-202ENST00000399127 C9orf172C9J069 976 aa10.4□□□□□ -0.74
COL25A1-202ENST00000399127 DNASE2O00115 360 aaPredicted RBP10.4□□□□□ -0.74
COL25A1-202ENST00000399127 SFTPCP11686 197 aa10.4□□□□□ -0.74
COL25A1-202ENST00000399127 STOMP27105 288 aa10.4□□□□□ -0.74
COL25A1-202ENST00000399127 GABREP78334 506 aa10.4□□□□□ -0.74
COL25A1-202ENST00000399127 OC90Q02509 493 aaPredicted RBP10.4□□□□□ -0.74
COL25A1-202ENST00000399127 CDCP2Q5VXM1 449 aa10.4□□□□□ -0.74
COL25A1-202ENST00000399127 ZNF627Q7L945 461 aa10.4□□□□□ -0.74
COL25A1-202ENST00000399127 OR4D6Q8NGJ1 314 aa10.4□□□□□ -0.74
COL25A1-202ENST00000399127 NKD1Q969G9 470 aa10.4□□□□□ -0.74
COL25A1-202ENST00000399127 GSX2Q9BZM3 304 aa10.4□□□□□ -0.74
COL25A1-202ENST00000399127 CLEC4MQ9H2X3 399 aaPredicted RBP10.4□□□□□ -0.74
COL25A1-202ENST00000399127 P4HTMQ9NXG6 502 aa10.4□□□□□ -0.74
COL25A1-202ENST00000399127 FARSAQ9Y285 508 aaKnown RBP10.4□□□□□ -0.74
COL25A1-202ENST00000399127 SESN1Q9Y6P5 492 aa10.4□□□□□ -0.74
COL25A1-202ENST00000399127 ZNF318Q5VUA4 2279 aa10.4□□□□□ -0.75
COL25A1-202ENST00000399127 KRBOX1C9JBD0 128 aa10.4□□□□□ -0.75
COL25A1-202ENST00000399127 NPIPA2E9PIF3 369 aa10.4□□□□□ -0.75
COL25A1-202ENST00000399127 NPIPA3F8WFD2 350 aa10.4□□□□□ -0.75
COL25A1-202ENST00000399127 ARPC1BO15143 372 aaKnown RBP10.4□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms