RNA–Protein interactions for RNA: ENST00000398258.7

CD47-203, Transcript of CD47 molecule, humanhuman

TSL 3

Gene CD47, Length 469 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-203ENST00000398258 A0A0J9YYE9 177 aa1.6□□□□□ -2.15
CD47-203ENST00000398258 A0A1W2PP18 115 aa1.6□□□□□ -2.15
CD47-203ENST00000398258 SERPINE3A8MV23 424 aa1.6□□□□□ -2.15
CD47-203ENST00000398258 TNFRSF11BO00300 401 aa1.6□□□□□ -2.15
CD47-203ENST00000398258 GABRPO00591 440 aa1.6□□□□□ -2.15
CD47-203ENST00000398258 CDC40O60508 579 aaKnown RBP eCLIP1.6□□□□□ -2.15
CD47-203ENST00000398258 RAD1O60671 282 aa1.6□□□□□ -2.15
CD47-203ENST00000398258 SCELO95171 688 aa1.6□□□□□ -2.15
CD47-203ENST00000398258 FARS2O95363 451 aaKnown RBP1.6□□□□□ -2.15
CD47-203ENST00000398258 TDP2O95551 362 aa1.6□□□□□ -2.15
CD47-203ENST00000398258 OTCP00480 354 aa1.6□□□□□ -2.15
CD47-203ENST00000398258 TRBC1P01850 177 aa1.6□□□□□ -2.15
CD47-203ENST00000398258 HLA-DQA1P01909 254 aa1.6□□□□□ -2.15
CD47-203ENST00000398258 GLAP06280 429 aa1.6□□□□□ -2.15
CD47-203ENST00000398258 GABRG2P18507 467 aa1.6□□□□□ -2.15
CD47-203ENST00000398258 RAB5AP20339 215 aa1.6□□□□□ -2.15
CD47-203ENST00000398258 MYCNOSP40205 109 aa1.6□□□□□ -2.15
CD47-203ENST00000398258 RBM34P42696 430 aaKnown RBP1.6□□□□□ -2.15
CD47-203ENST00000398258 PPICP45877 212 aa1.6□□□□□ -2.15
CD47-203ENST00000398258 SERPINB8P50452 374 aa1.6□□□□□ -2.15
CD47-203ENST00000398258 CLDN6P56747 220 aa1.6□□□□□ -2.15
CD47-203ENST00000398258 OR2B8PP59922 312 aa1.6□□□□□ -2.15
CD47-203ENST00000398258 KDSRQ06136 332 aa1.6□□□□□ -2.15
CD47-203ENST00000398258 ZNF33AQ06730 810 aa1.6□□□□□ -2.15
CD47-203ENST00000398258 SLC39A6Q13433 755 aa1.6□□□□□ -2.15
CD47-203ENST00000398258 PTGES3Q15185 160 aaKnown RBP1.6□□□□□ -2.15
CD47-203ENST00000398258 HADHQ16836 314 aaKnown RBP1.6□□□□□ -2.15
CD47-203ENST00000398258 LINC00483Q53H64 154 aa1.6□□□□□ -2.15
CD47-203ENST00000398258 FAM78AQ5JUQ0 283 aa1.6□□□□□ -2.15
CD47-203ENST00000398258 TTC19Q6DKK2 380 aaPredicted RBP1.6□□□□□ -2.15
CD47-203ENST00000398258 ADNP2Q6IQ32 1131 aa1.6□□□□□ -2.15
CD47-203ENST00000398258 NANOGP8Q6NSW7 305 aa1.6□□□□□ -2.15
CD47-203ENST00000398258 CALHM1Q8IU99 346 aa1.6□□□□□ -2.15
CD47-203ENST00000398258 ZNF695Q8IW36 515 aa1.6□□□□□ -2.15
CD47-203ENST00000398258 RIMKLAQ8IXN7 391 aa1.6□□□□□ -2.15
CD47-203ENST00000398258 ESR2Q92731 530 aa1.6□□□□□ -2.15
CD47-203ENST00000398258 HAUS1Q96CS2 278 aa1.6□□□□□ -2.15
CD47-203ENST00000398258 FAM19A4Q96LR4 140 aa1.6□□□□□ -2.15
CD47-203ENST00000398258 TEAD3Q99594 435 aa1.6□□□□□ -2.15
CD47-203ENST00000398258 EDA2RQ9HAV5 297 aa1.6□□□□□ -2.15
CD47-203ENST00000398258 CYP3A43Q9HB55 503 aa1.6□□□□□ -2.15
CD47-203ENST00000398258 FANCEQ9HB96 536 aa1.6□□□□□ -2.15
CD47-203ENST00000398258 TMEM27Q9HBJ8 222 aa1.6□□□□□ -2.15
CD47-203ENST00000398258 TRMT112Q9UI30 125 aaKnown RBP1.6□□□□□ -2.15
CD47-203ENST00000398258 ZNF257Q9Y2Q1 563 aa1.6□□□□□ -2.15
CD47-203ENST00000398258 MROH5Q6ZUA9 1318 aa1.6□□□□□ -2.15
CD47-203ENST00000398258 SLIT3O75094 1523 aa1.6□□□□□ -2.15
CD47-203ENST00000398258 IGHV3-72A0A0B4J1Y9 119 aa1.59□□□□□ -2.15
CD47-203ENST00000398258 A0A0B4J2E0 115 aa1.59□□□□□ -2.15
CD47-203ENST00000398258 IGHV1-69DA0A0B4J2H0 117 aa1.59□□□□□ -2.15
CD47-203ENST00000398258 A0A1B0GUH1 482 aa1.59□□□□□ -2.15
CD47-203ENST00000398258 KRBOX1C9JBD0 128 aa1.59□□□□□ -2.15
CD47-203ENST00000398258 H0YJW9 148 aa1.59□□□□□ -2.15
CD47-203ENST00000398258 ZNF701M0R085 212 aaPredicted RBP1.59□□□□□ -2.15
CD47-203ENST00000398258 PLPP1O14494 284 aa1.59□□□□□ -2.15
CD47-203ENST00000398258 RAD51BO15315 384 aa1.59□□□□□ -2.15
CD47-203ENST00000398258 NVLO15381 856 aaKnown RBP1.59□□□□□ -2.15
CD47-203ENST00000398258 B4GALT5O43286 388 aa1.59□□□□□ -2.15
CD47-203ENST00000398258 NMT2O60551 498 aa1.59□□□□□ -2.15
CD47-203ENST00000398258 SLC16A7O60669 478 aa1.59□□□□□ -2.15
CD47-203ENST00000398258 CTNSO60931 367 aa1.59□□□□□ -2.15
CD47-203ENST00000398258 RDH16O75452 317 aa1.59□□□□□ -2.15
CD47-203ENST00000398258 SLC22A5O76082 557 aa1.59□□□□□ -2.15
CD47-203ENST00000398258 GLSO94925 669 aaPredicted RBP1.59□□□□□ -2.15
CD47-203ENST00000398258 KLK1P06870 262 aa1.59□□□□□ -2.15
CD47-203ENST00000398258 KRT16P08779 473 aa1.59□□□□□ -2.15
CD47-203ENST00000398258 MRPL3P09001 348 aaKnown RBP1.59□□□□□ -2.15
CD47-203ENST00000398258 OR8U9P0C7N5 309 aa1.59□□□□□ -2.15
CD47-203ENST00000398258 MUC1P15941 1255 aaPredicted RBP1.59□□□□□ -2.15
CD47-203ENST00000398258 CD70P32970 193 aa1.59□□□□□ -2.15
CD47-203ENST00000398258 CXCL12P48061 93 aa1.59□□□□□ -2.15
CD47-203ENST00000398258 LINC00315P59091 139 aa1.59□□□□□ -2.15
CD47-203ENST00000398258 RPL23P62829 140 aaKnown RBP1.59□□□□□ -2.15
CD47-203ENST00000398258 CRADDP78560 199 aa1.59□□□□□ -2.15
CD47-203ENST00000398258 DGCR6Q14129 220 aa1.59□□□□□ -2.15
CD47-203ENST00000398258 CAVIN4Q5BKX8 364 aa1.59□□□□□ -2.15
CD47-203ENST00000398258 TPRG1LQ5T0D9 272 aa1.59□□□□□ -2.15
CD47-203ENST00000398258 ZNF684Q5T5D7 378 aa1.59□□□□□ -2.15
CD47-203ENST00000398258 FBXW9Q5XUX1 488 aa1.59□□□□□ -2.15
CD47-203ENST00000398258 ULK3Q6PHR2 472 aa1.59□□□□□ -2.15
CD47-203ENST00000398258 C12orf54Q6X4T0 127 aa1.59□□□□□ -2.15
CD47-203ENST00000398258 MYOCDQ8IZQ8 938 aa1.59□□□□□ -2.15
CD47-203ENST00000398258 C19orf18Q8NEA5 215 aa1.59□□□□□ -2.15
CD47-203ENST00000398258 OR4K5Q8NGD3 323 aa1.59□□□□□ -2.15
CD47-203ENST00000398258 OR52K1Q8NGK4 314 aa1.59□□□□□ -2.15
CD47-203ENST00000398258 LRRC29Q8WV35 223 aa1.59□□□□□ -2.15
CD47-203ENST00000398258 FRZBQ92765 325 aa1.59□□□□□ -2.15
CD47-203ENST00000398258 RAB1CQ92928 201 aa1.59□□□□□ -2.15
CD47-203ENST00000398258 FLYWCH2Q96CP2 140 aaKnown RBP1.59□□□□□ -2.15
CD47-203ENST00000398258 CERS2Q96G23 380 aa1.59□□□□□ -2.15
CD47-203ENST00000398258 SMARCD1Q96GM5 515 aa1.59□□□□□ -2.15
CD47-203ENST00000398258 HSD17B10Q99714 261 aaKnown RBP1.59□□□□□ -2.15
CD47-203ENST00000398258 SPIN2AQ99865 258 aa1.59□□□□□ -2.15
CD47-203ENST00000398258 SPIN2BQ9BPZ2 258 aa1.59□□□□□ -2.15
CD47-203ENST00000398258 SLIRPQ9GZT3 109 aaKnown RBP1.59□□□□□ -2.15
CD47-203ENST00000398258 OR2AG1Q9H205 316 aa1.59□□□□□ -2.15
CD47-203ENST00000398258 RRAGDQ9NQL2 400 aaPredicted RBP1.59□□□□□ -2.15
CD47-203ENST00000398258 ZC4H2Q9NQZ6 224 aa1.59□□□□□ -2.15
CD47-203ENST00000398258 C8orf17Q9NRJ1 99 aa1.59□□□□□ -2.15
CD47-203ENST00000398258 MCUBQ9NWR8 336 aa1.59□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms