RNA–Protein interactions for RNA: ENST00000398022.6

TM9SF4-202, Transcript of transmembrane 9 superfamily member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM9SF4, Length 3,978 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4-202ENST00000398022 C19orf67A6NJJ6 358 aa5.91□□□□□ -1.46
TM9SF4-202ENST00000398022 J3KTA2 159 aa5.91□□□□□ -1.46
TM9SF4-202ENST00000398022 CCL25O15444 150 aa5.91□□□□□ -1.46
TM9SF4-202ENST00000398022 S1PR2O95136 353 aa5.91□□□□□ -1.46
TM9SF4-202ENST00000398022 GASTP01350 101 aa5.91□□□□□ -1.46
TM9SF4-202ENST00000398022 IL6RP08887 468 aaPredicted RBP5.91□□□□□ -1.46
TM9SF4-202ENST00000398022 FAM87AP0C7U9 286 aa5.91□□□□□ -1.46
TM9SF4-202ENST00000398022 NTSR1P30989 418 aa5.91□□□□□ -1.46
TM9SF4-202ENST00000398022 SOX3P41225 446 aa5.91□□□□□ -1.46
TM9SF4-202ENST00000398022 CRYBA2P53672 197 aa5.91□□□□□ -1.46
TM9SF4-202ENST00000398022 FBLN7Q53RD9 439 aa5.91□□□□□ -1.46
TM9SF4-202ENST00000398022 KIAA0895LQ68EN5 471 aa5.91□□□□□ -1.46
TM9SF4-202ENST00000398022 STEAP1BQ6NZ63 245 aa5.91□□□□□ -1.46
TM9SF4-202ENST00000398022 KCNIP4Q6PIL6 250 aa5.91□□□□□ -1.46
TM9SF4-202ENST00000398022 COMMD6Q7Z4G1 85 aa5.91□□□□□ -1.46
TM9SF4-202ENST00000398022 CENPVQ7Z7K6 275 aaPredicted RBP5.91□□□□□ -1.46
TM9SF4-202ENST00000398022 OR5M9Q8NGP3 310 aa5.91□□□□□ -1.46
TM9SF4-202ENST00000398022 SP7Q8TDD2 431 aaPredicted RBP5.91□□□□□ -1.46
TM9SF4-202ENST00000398022 ZNF431Q8TF32 576 aaPredicted RBP5.91□□□□□ -1.46
TM9SF4-202ENST00000398022 NUDCD2Q8WVJ2 157 aa5.91□□□□□ -1.46
TM9SF4-202ENST00000398022 LCN9Q8WX39 176 aa5.91□□□□□ -1.46
TM9SF4-202ENST00000398022 HOXB13Q92826 284 aaPredicted RBP5.91□□□□□ -1.46
TM9SF4-202ENST00000398022 LHX4Q969G2 390 aa5.91□□□□□ -1.46
TM9SF4-202ENST00000398022 SDHCQ99643 169 aaPredicted RBP5.91□□□□□ -1.46
TM9SF4-202ENST00000398022 SPATA5L1Q9BVQ7 753 aa5.91□□□□□ -1.46
TM9SF4-202ENST00000398022 TAPBPLQ9BX59 468 aa5.91□□□□□ -1.46
TM9SF4-202ENST00000398022 IL23AQ9NPF7 189 aa5.91□□□□□ -1.46
TM9SF4-202ENST00000398022 NDUFB11Q9NX14 153 aa5.91□□□□□ -1.46
TM9SF4-202ENST00000398022 STEAP1Q9UHE8 339 aa5.91□□□□□ -1.46
TM9SF4-202ENST00000398022 NBEAQ8NFP9 2946 aa5.9□□□□□ -1.46
TM9SF4-202ENST00000398022 PRAMEF33A0A0G2JMD5 474 aa5.9□□□□□ -1.46
TM9SF4-202ENST00000398022 PRAMEF10O60809 474 aa5.9□□□□□ -1.46
TM9SF4-202ENST00000398022 RAB36O95755 333 aa5.9□□□□□ -1.46
TM9SF4-202ENST00000398022 FURINP09958 794 aa5.9□□□□□ -1.46
TM9SF4-202ENST00000398022 ZNF14P17017 642 aaPredicted RBP5.9□□□□□ -1.46
TM9SF4-202ENST00000398022 CDX1P47902 265 aaPredicted RBP5.9□□□□□ -1.46
TM9SF4-202ENST00000398022 TAS2R50P59544 299 aa5.9□□□□□ -1.46
TM9SF4-202ENST00000398022 RAE1P78406 368 aaKnown RBP5.9□□□□□ -1.46
TM9SF4-202ENST00000398022 ID2Q02363 134 aa5.9□□□□□ -1.46
TM9SF4-202ENST00000398022 TFF2Q03403 129 aa5.9□□□□□ -1.46
TM9SF4-202ENST00000398022 TLE1Q04724 770 aa5.9□□□□□ -1.46
TM9SF4-202ENST00000398022 SSX1Q16384 188 aa5.9□□□□□ -1.46
TM9SF4-202ENST00000398022 FAM198BQ6UWH4 519 aa5.9□□□□□ -1.46
TM9SF4-202ENST00000398022 CEACAM20Q6UY09 585 aa5.9□□□□□ -1.46
TM9SF4-202ENST00000398022 LAX1Q8IWV1 398 aa5.9□□□□□ -1.46
TM9SF4-202ENST00000398022 CSNK1A1LQ8N752 337 aa5.9□□□□□ -1.46
TM9SF4-202ENST00000398022 CDRT4Q8N9R6 151 aa5.9□□□□□ -1.46
TM9SF4-202ENST00000398022 OR51F2Q8NH61 342 aa5.9□□□□□ -1.46
TM9SF4-202ENST00000398022 RIOK2Q9BVS4 552 aaKnown RBP5.9□□□□□ -1.46
TM9SF4-202ENST00000398022 ABCG5Q9H222 651 aa5.9□□□□□ -1.46
TM9SF4-202ENST00000398022 HEXA-AS1Q9H8Q6 139 aa5.9□□□□□ -1.46
TM9SF4-202ENST00000398022 HSPB7Q9UBY9 170 aa5.9□□□□□ -1.46
TM9SF4-202ENST00000398022 HHLA2Q9UM44 414 aa5.9□□□□□ -1.46
TM9SF4-202ENST00000398022 ATG4BQ9Y4P1 393 aa5.9□□□□□ -1.46
TM9SF4-202ENST00000398022 TGIF2-C20orf24A0A0A6YYL0 155 aa5.9□□□□□ -1.47
TM9SF4-202ENST00000398022 C2orf72A6NCS6 295 aa5.9□□□□□ -1.47
TM9SF4-202ENST00000398022 CA3P07451 260 aa5.9□□□□□ -1.47
TM9SF4-202ENST00000398022 BDKRB1P46663 353 aa5.9□□□□□ -1.47
TM9SF4-202ENST00000398022 ARL4DP49703 201 aa5.9□□□□□ -1.47
TM9SF4-202ENST00000398022 DCDP81605 110 aaKnown RBP5.9□□□□□ -1.47
TM9SF4-202ENST00000398022 ZNF234Q14588 700 aa5.9□□□□□ -1.47
TM9SF4-202ENST00000398022 POU2AF1Q16633 256 aa5.9□□□□□ -1.47
TM9SF4-202ENST00000398022 COL5A1-AS1Q5SY13 56 aa5.9□□□□□ -1.47
TM9SF4-202ENST00000398022 LIPKQ5VXJ0 399 aa5.9□□□□□ -1.47
TM9SF4-202ENST00000398022 ZNF57Q68EA5 555 aaPredicted RBP5.9□□□□□ -1.47
TM9SF4-202ENST00000398022 TXNDC8Q6A555 127 aa5.9□□□□□ -1.47
TM9SF4-202ENST00000398022 TSEN54Q7Z6J9 526 aaKnown RBP5.9□□□□□ -1.47
TM9SF4-202ENST00000398022 ATG4DQ86TL0 474 aaPredicted RBP5.9□□□□□ -1.47
TM9SF4-202ENST00000398022 TCEANCQ8N8B7 351 aa5.9□□□□□ -1.47
TM9SF4-202ENST00000398022 LMLNQ96KR4 655 aa5.9□□□□□ -1.47
TM9SF4-202ENST00000398022 MCRIP2Q9BUT9 160 aaKnown RBP5.9□□□□□ -1.47
TM9SF4-202ENST00000398022 TLNRD1Q9H1K6 362 aa5.9□□□□□ -1.47
TM9SF4-202ENST00000398022 RNF121Q9H920 327 aa5.9□□□□□ -1.47
TM9SF4-202ENST00000398022 ADGRL4Q9HBW9 690 aa5.9□□□□□ -1.47
TM9SF4-202ENST00000398022 RAB9BQ9NP90 201 aa5.9□□□□□ -1.47
TM9SF4-202ENST00000398022 HS3ST2Q9Y278 367 aa5.9□□□□□ -1.47
TM9SF4-202ENST00000398022 SPIN1Q9Y657 262 aaPredicted RBP5.9□□□□□ -1.47
TM9SF4-202ENST00000398022 GPR31O00270 319 aa5.9□□□□□ -1.47
TM9SF4-202ENST00000398022 ORC5O43913 435 aa5.9□□□□□ -1.47
TM9SF4-202ENST00000398022 GCM2O75603 506 aaPredicted RBP5.9□□□□□ -1.47
TM9SF4-202ENST00000398022 SOX14O95416 240 aa5.9□□□□□ -1.47
TM9SF4-202ENST00000398022 ETHE1O95571 254 aa5.9□□□□□ -1.47
TM9SF4-202ENST00000398022 GPR75O95800 540 aa5.9□□□□□ -1.47
TM9SF4-202ENST00000398022 ITGB7P26010 798 aa5.9□□□□□ -1.47
TM9SF4-202ENST00000398022 CD70P32970 193 aa5.9□□□□□ -1.47
TM9SF4-202ENST00000398022 CRISP3P54108 245 aa5.9□□□□□ -1.47
TM9SF4-202ENST00000398022 MANFP55145 182 aaKnown RBP5.9□□□□□ -1.47
TM9SF4-202ENST00000398022 WDR5P61964 334 aaKnown RBP5.9□□□□□ -1.47
TM9SF4-202ENST00000398022 EFNB3Q15768 340 aa5.9□□□□□ -1.47
TM9SF4-202ENST00000398022 ARHGAP11BQ3KRB8 267 aa5.9□□□□□ -1.47
TM9SF4-202ENST00000398022 ZNF385BQ569K4 471 aa5.9□□□□□ -1.47
TM9SF4-202ENST00000398022 TMEM201Q5SNT2 666 aa5.9□□□□□ -1.47
TM9SF4-202ENST00000398022 BICRALQ6AI39 1079 aa5.9□□□□□ -1.47
TM9SF4-202ENST00000398022 Q6ZNB5 142 aa5.9□□□□□ -1.47
TM9SF4-202ENST00000398022 SLCO4C1Q6ZQN7 724 aa5.9□□□□□ -1.47
TM9SF4-202ENST00000398022 RFLNAQ6ZTI6 216 aa5.9□□□□□ -1.47
TM9SF4-202ENST00000398022 TMEM173Q86WV6 379 aaPredicted RBP5.9□□□□□ -1.47
TM9SF4-202ENST00000398022 OR2G2Q8NGZ5 317 aa5.9□□□□□ -1.47
TM9SF4-202ENST00000398022 SCAMP4Q969E2 229 aa5.9□□□□□ -1.47
TM9SF4-202ENST00000398022 SLC25A46Q96AG3 418 aa5.9□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms