RNA–Protein interactions for RNA: ENST00000397606.7

PTPRD-204, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 1 (best) BASIC

Gene PTPRD, Length 5,038 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-204ENST00000397606 BCO1Q9HAY6 547 aa7.33□□□□□ -1.24
PTPRD-204ENST00000397606 TMEM100Q9NV29 134 aa7.33□□□□□ -1.24
PTPRD-204ENST00000397606 FAIMQ9NVQ4 179 aa7.33□□□□□ -1.24
PTPRD-204ENST00000397606 PCDHGA9Q9Y5G4 932 aaKnown RBP7.33□□□□□ -1.24
PTPRD-204ENST00000397606 KCNMB2Q9Y691 235 aa7.33□□□□□ -1.24
PTPRD-204ENST00000397606 CCDC88CQ9P219 2028 aa7.33□□□□□ -1.24
PTPRD-204ENST00000397606 SDK2Q58EX2 2172 aa7.33□□□□□ -1.24
PTPRD-204ENST00000397606 C16orf97H3BN30 126 aa7.33□□□□□ -1.24
PTPRD-204ENST00000397606 SULT1B1O43704 296 aa7.33□□□□□ -1.24
PTPRD-204ENST00000397606 IL11P20809 199 aa7.33□□□□□ -1.24
PTPRD-204ENST00000397606 ZNF133P52736 654 aaPredicted RBP7.33□□□□□ -1.24
PTPRD-204ENST00000397606 INO80CQ6PI98 192 aaPredicted RBP7.33□□□□□ -1.24
PTPRD-204ENST00000397606 C19orf48Q6RUI8 117 aa7.33□□□□□ -1.24
PTPRD-204ENST00000397606 CDC20BQ86Y33 519 aa7.33□□□□□ -1.24
PTPRD-204ENST00000397606 SLC26A10Q8NG04 563 aa7.33□□□□□ -1.24
PTPRD-204ENST00000397606 EMG1Q92979 244 aaKnown RBP7.33□□□□□ -1.24
PTPRD-204ENST00000397606 OR2M2Q96R28 347 aa7.33□□□□□ -1.24
PTPRD-204ENST00000397606 C7orf50Q9BRJ6 194 aaKnown RBP7.33□□□□□ -1.24
PTPRD-204ENST00000397606 MRPL15Q9P015 296 aaKnown RBP7.33□□□□□ -1.24
PTPRD-204ENST00000397606 TRAV6A0A075B6T7 132 aa7.33□□□□□ -1.24
PTPRD-204ENST00000397606 NPIPB13A6NJU9 1138 aa7.33□□□□□ -1.24
PTPRD-204ENST00000397606 NPIPB4C9JG80 1138 aa7.33□□□□□ -1.24
PTPRD-204ENST00000397606 FAM87AP0C7U9 286 aa7.33□□□□□ -1.24
PTPRD-204ENST00000397606 EXOSC6Q5RKV6 272 aaKnown RBP7.33□□□□□ -1.24
PTPRD-204ENST00000397606 RNLSQ5VYX0 342 aa7.33□□□□□ -1.24
PTPRD-204ENST00000397606 SYT9Q86SS6 491 aa7.33□□□□□ -1.24
PTPRD-204ENST00000397606 ZFP62Q8NB50 900 aaPredicted RBP7.33□□□□□ -1.24
PTPRD-204ENST00000397606 OR13C5Q8NGS8 318 aa7.33□□□□□ -1.24
PTPRD-204ENST00000397606 OR51F2Q8NH61 342 aa7.33□□□□□ -1.24
PTPRD-204ENST00000397606 SPSB1Q96BD6 273 aa7.33□□□□□ -1.24
PTPRD-204ENST00000397606 YIPF6Q96EC8 236 aa7.33□□□□□ -1.24
PTPRD-204ENST00000397606 TIMP4Q99727 224 aa7.33□□□□□ -1.24
PTPRD-204ENST00000397606 ZNF286AQ9HBT8 521 aa7.33□□□□□ -1.24
PTPRD-204ENST00000397606 GP6Q9HCN6 339 aa7.33□□□□□ -1.24
PTPRD-204ENST00000397606 GHRLQ9UBU3 117 aa7.33□□□□□ -1.24
PTPRD-204ENST00000397606 DOCK9Q9BZ29 2069 aa7.32□□□□□ -1.24
PTPRD-204ENST00000397606 IGLV3-32A0A0A0MS00 114 aa7.32□□□□□ -1.24
PTPRD-204ENST00000397606 ZNF724A8MTY0 619 aa7.32□□□□□ -1.24
PTPRD-204ENST00000397606 AIPO00170 330 aa7.32□□□□□ -1.24
PTPRD-204ENST00000397606 IGHA1P01876 353 aa7.32□□□□□ -1.24
PTPRD-204ENST00000397606 AKAIN1P0CW23 69 aa7.32□□□□□ -1.24
PTPRD-204ENST00000397606 SEC61A1P61619 476 aaKnown RBP7.32□□□□□ -1.24
PTPRD-204ENST00000397606 SNRPNP63162 240 aaKnown RBP7.32□□□□□ -1.24
PTPRD-204ENST00000397606 TBRG1Q3YBR2 411 aa7.32□□□□□ -1.24
PTPRD-204ENST00000397606 RIPPLY2Q5TAB7 128 aa7.32□□□□□ -1.24
PTPRD-204ENST00000397606 LYPD4Q6UWN0 246 aa7.32□□□□□ -1.24
PTPRD-204ENST00000397606 COMTD1Q86VU5 262 aa7.32□□□□□ -1.24
PTPRD-204ENST00000397606 CASTOR1Q8WTX7 329 aa7.32□□□□□ -1.24
PTPRD-204ENST00000397606 CREB3L1Q96BA8 519 aa7.32□□□□□ -1.24
PTPRD-204ENST00000397606 MESP1Q9BRJ9 268 aa7.32□□□□□ -1.24
PTPRD-204ENST00000397606 FOXJ3Q9UPW0 622 aa7.32□□□□□ -1.24
PTPRD-204ENST00000397606 TRAV1-2A0A0B4J238 106 aa7.32□□□□□ -1.24
PTPRD-204ENST00000397606 A0A1B0GVC2 190 aa7.32□□□□□ -1.24
PTPRD-204ENST00000397606 C17orf51A8MQB3 221 aa7.32□□□□□ -1.24
PTPRD-204ENST00000397606 CYTIPO60759 359 aa7.32□□□□□ -1.24
PTPRD-204ENST00000397606 DHRS3O75911 302 aa7.32□□□□□ -1.24
PTPRD-204ENST00000397606 ZFPL1O95159 310 aa7.32□□□□□ -1.24
PTPRD-204ENST00000397606 PATE4P0C8F1 98 aa7.32□□□□□ -1.24
PTPRD-204ENST00000397606 GSTT2P0CG29 244 aa7.32□□□□□ -1.24
PTPRD-204ENST00000397606 FAHP16930 419 aa7.32□□□□□ -1.24
PTPRD-204ENST00000397606 TGM1P22735 817 aa7.32□□□□□ -1.24
PTPRD-204ENST00000397606 IL2RGP31785 369 aa7.32□□□□□ -1.24
PTPRD-204ENST00000397606 SRP9P49458 86 aaKnown RBP7.32□□□□□ -1.24
PTPRD-204ENST00000397606 FUT6P51993 359 aa7.32□□□□□ -1.24
PTPRD-204ENST00000397606 TAS2R19P59542 299 aa7.32□□□□□ -1.24
PTPRD-204ENST00000397606 PPA1Q15181 289 aa7.32□□□□□ -1.24
PTPRD-204ENST00000397606 ZFP69Q49AA0 526 aa7.32□□□□□ -1.24
PTPRD-204ENST00000397606 SPATA46Q5T0L3 261 aa7.32□□□□□ -1.24
PTPRD-204ENST00000397606 FAM27BQ5VT28 67 aa7.32□□□□□ -1.24
PTPRD-204ENST00000397606 STAC2Q6ZMT1 411 aa7.32□□□□□ -1.24
PTPRD-204ENST00000397606 LINC00299Q6ZSB3 139 aa7.32□□□□□ -1.24
PTPRD-204ENST00000397606 MS4A18H0YCH9 400 aa7.32□□□□□ -1.24
PTPRD-204ENST00000397606 AQP7O14520 342 aa7.32□□□□□ -1.24
PTPRD-204ENST00000397606 LYRM1O43325 122 aa7.32□□□□□ -1.24
PTPRD-204ENST00000397606 UPK3AO75631 287 aa7.32□□□□□ -1.24
PTPRD-204ENST00000397606 CRHP06850 196 aa7.32□□□□□ -1.24
PTPRD-204ENST00000397606 EGR4Q05215 589 aa7.32□□□□□ -1.24
PTPRD-204ENST00000397606 MS4A18Q3C1V0 323 aa7.32□□□□□ -1.24
PTPRD-204ENST00000397606 ACTBL2Q562R1 376 aa7.32□□□□□ -1.24
PTPRD-204ENST00000397606 SLC25A53Q5H9E4 307 aa7.32□□□□□ -1.24
PTPRD-204ENST00000397606 CMTM1Q8IZ96 169 aa7.32□□□□□ -1.24
PTPRD-204ENST00000397606 PRR18Q8N4B5 295 aa7.32□□□□□ -1.24
PTPRD-204ENST00000397606 PRRT1Q99946 306 aa7.32□□□□□ -1.24
PTPRD-204ENST00000397606 TRAPPC2LQ9UL33 140 aa7.32□□□□□ -1.24
PTPRD-204ENST00000397606 IFITM5A6NNB3 132 aa7.32□□□□□ -1.24
PTPRD-204ENST00000397606 SMAD9O15198 467 aaKnown RBP7.32□□□□□ -1.24
PTPRD-204ENST00000397606 ZIC3O60481 467 aa7.32□□□□□ -1.24
PTPRD-204ENST00000397606 H2AFB2P0C5Z0 115 aa7.32□□□□□ -1.24
PTPRD-204ENST00000397606 CTSSP25774 331 aa7.32□□□□□ -1.24
PTPRD-204ENST00000397606 GNRHRP30968 328 aa7.32□□□□□ -1.24
PTPRD-204ENST00000397606 FGF9P31371 208 aaPredicted RBP7.32□□□□□ -1.24
PTPRD-204ENST00000397606 PTH2RP49190 550 aa7.32□□□□□ -1.24
PTPRD-204ENST00000397606 TAS2R46P59540 309 aa7.32□□□□□ -1.24
PTPRD-204ENST00000397606 FBXL14Q8N1E6 418 aa7.32□□□□□ -1.24
PTPRD-204ENST00000397606 CCDC71LQ8N9Z2 235 aa7.32□□□□□ -1.24
PTPRD-204ENST00000397606 GCDHQ92947 438 aaPredicted RBP7.32□□□□□ -1.24
PTPRD-204ENST00000397606 BARHL1Q9BZE3 327 aa7.32□□□□□ -1.24
PTPRD-204ENST00000397606 UFSP2Q9NUQ7 469 aa7.32□□□□□ -1.24
PTPRD-204ENST00000397606 MRPS18AQ9NVS2 196 aaKnown RBP7.32□□□□□ -1.24
PTPRD-204ENST00000397606 MRM2Q9UI43 246 aaKnown RBP7.32□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms