RNA–Protein interactions for RNA: ENST00000397204.8

CAPN3-208, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 1,237 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-208ENST00000397204 ZNF281Q9Y2X9 895 aa7.26□□□□□ -1.25
CAPN3-208ENST00000397204 NBEAL2Q6ZNJ1 2754 aa7.25□□□□□ -1.25
CAPN3-208ENST00000397204 IGHV1-69DA0A0B4J2H0 117 aa7.25□□□□□ -1.25
CAPN3-208ENST00000397204 LOC100653049A0A140TA62 436 aa7.25□□□□□ -1.25
CAPN3-208ENST00000397204 FAM220BPB1ANY3 271 aa7.25□□□□□ -1.25
CAPN3-208ENST00000397204 J3KTA2 159 aa7.25□□□□□ -1.25
CAPN3-208ENST00000397204 LGALS8O00214 317 aa7.25□□□□□ -1.25
CAPN3-208ENST00000397204 GPR137BO60478 399 aa7.25□□□□□ -1.25
CAPN3-208ENST00000397204 GMDSO60547 372 aa7.25□□□□□ -1.25
CAPN3-208ENST00000397204 KRT34O76011 436 aa7.25□□□□□ -1.25
CAPN3-208ENST00000397204 TXNDC12O95881 172 aa7.25□□□□□ -1.25
CAPN3-208ENST00000397204 ECDO95905 644 aaPredicted RBP7.25□□□□□ -1.25
CAPN3-208ENST00000397204 IGHV1-69P01742 117 aa7.25□□□□□ -1.25
CAPN3-208ENST00000397204 HLA-DPB1P04440 258 aa7.25□□□□□ -1.25
CAPN3-208ENST00000397204 MMP9P14780 707 aa7.25□□□□□ -1.25
CAPN3-208ENST00000397204 GPR4P46093 362 aa7.25□□□□□ -1.25
CAPN3-208ENST00000397204 RAD23AP54725 363 aa7.25□□□□□ -1.25
CAPN3-208ENST00000397204 PROK1P58294 105 aa7.25□□□□□ -1.25
CAPN3-208ENST00000397204 KRTAP10-3P60369 221 aa7.25□□□□□ -1.25
CAPN3-208ENST00000397204 TAGLNQ01995 201 aaKnown RBP7.25□□□□□ -1.25
CAPN3-208ENST00000397204 COX10Q12887 443 aa7.25□□□□□ -1.25
CAPN3-208ENST00000397204 MALLQ13021 153 aa7.25□□□□□ -1.25
CAPN3-208ENST00000397204 KRR1Q13601 381 aaKnown RBP7.25□□□□□ -1.25
CAPN3-208ENST00000397204 GK2Q14410 553 aaPredicted RBP7.25□□□□□ -1.25
CAPN3-208ENST00000397204 MAPRE2Q15555 327 aa7.25□□□□□ -1.25
CAPN3-208ENST00000397204 CLEC12AQ5QGZ9 265 aa7.25□□□□□ -1.25
CAPN3-208ENST00000397204 METTL11BQ5VVY1 283 aa7.25□□□□□ -1.25
CAPN3-208ENST00000397204 OTPQ5XKR4 325 aa7.25□□□□□ -1.25
CAPN3-208ENST00000397204 DNM1P34Q6PK57 102 aa7.25□□□□□ -1.25
CAPN3-208ENST00000397204 DPY19L2P2Q6ZN68 376 aa7.25□□□□□ -1.25
CAPN3-208ENST00000397204 GDPGP1Q6ZNW5 385 aa7.25□□□□□ -1.25
CAPN3-208ENST00000397204 PGAP1Q75T13 922 aa7.25□□□□□ -1.25
CAPN3-208ENST00000397204 CYP4Z1Q86W10 505 aa7.25□□□□□ -1.25
CAPN3-208ENST00000397204 ZSCAN4Q8NAM6 433 aaPredicted RBP7.25□□□□□ -1.25
CAPN3-208ENST00000397204 TBX15Q96SF7 602 aa7.25□□□□□ -1.25
CAPN3-208ENST00000397204 GPX7Q96SL4 187 aaPredicted RBP7.25□□□□□ -1.25
CAPN3-208ENST00000397204 PKP2Q99959 881 aa7.25□□□□□ -1.25
CAPN3-208ENST00000397204 DPAGT1Q9H3H5 408 aa7.25□□□□□ -1.25
CAPN3-208ENST00000397204 C16orf95Q9H693 158 aa7.25□□□□□ -1.25
CAPN3-208ENST00000397204 WDR76Q9H967 626 aa7.25□□□□□ -1.25
CAPN3-208ENST00000397204 FN3KRPQ9HA64 309 aa7.25□□□□□ -1.25
CAPN3-208ENST00000397204 TCF7L1Q9HCS4 588 aa7.25□□□□□ -1.25
CAPN3-208ENST00000397204 TMCC3Q9ULS5 477 aa7.25□□□□□ -1.25
CAPN3-208ENST00000397204 SIGLEC7Q9Y286 467 aa7.25□□□□□ -1.25
CAPN3-208ENST00000397204 POLR1DQ9Y2S0 133 aa7.25□□□□□ -1.25
CAPN3-208ENST00000397204 IER3IP1Q9Y5U9 82 aa7.25□□□□□ -1.25
CAPN3-208ENST00000397204 LHFPL6Q9Y693 200 aa7.25□□□□□ -1.25
CAPN3-208ENST00000397204 TRAV38-1A0A0B4J264 116 aa7.24□□□□□ -1.25
CAPN3-208ENST00000397204 A0A1W2PRQ8 180 aa7.24□□□□□ -1.25
CAPN3-208ENST00000397204 SLC22A31A6NKX4 558 aa7.24□□□□□ -1.25
CAPN3-208ENST00000397204 SOCS2O14508 198 aa7.24□□□□□ -1.25
CAPN3-208ENST00000397204 IMPA2O14732 288 aa7.24□□□□□ -1.25
CAPN3-208ENST00000397204 FAM20BO75063 409 aa7.24□□□□□ -1.25
CAPN3-208ENST00000397204 PPP1R3DO95685 299 aa7.24□□□□□ -1.25
CAPN3-208ENST00000397204 PTBP3O95758 552 aaKnown RBP7.24□□□□□ -1.25
CAPN3-208ENST00000397204 LCATP04180 440 aa7.24□□□□□ -1.25
CAPN3-208ENST00000397204 SFTPBP07988 381 aa7.24□□□□□ -1.25
CAPN3-208ENST00000397204 ACSM4P0C7M7 580 aa7.24□□□□□ -1.25
CAPN3-208ENST00000397204 MDH1P40925 334 aaKnown RBP7.24□□□□□ -1.25
CAPN3-208ENST00000397204 CDKN2AP42771 156 aaKnown RBP7.24□□□□□ -1.25
CAPN3-208ENST00000397204 IER3P46695 156 aa7.24□□□□□ -1.25
CAPN3-208ENST00000397204 CENPAP49450 140 aa7.24□□□□□ -1.25
CAPN3-208ENST00000397204 RPS6KA3P51812 740 aa7.24□□□□□ -1.25
CAPN3-208ENST00000397204 KLF10Q13118 480 aa7.24□□□□□ -1.25
CAPN3-208ENST00000397204 DGCR6Q14129 220 aa7.24□□□□□ -1.25
CAPN3-208ENST00000397204 MPPED2Q15777 294 aa7.24□□□□□ -1.25
CAPN3-208ENST00000397204 KRTAP27-1Q3LI81 207 aa7.24□□□□□ -1.25
CAPN3-208ENST00000397204 SLC36A3Q495N2 470 aa7.24□□□□□ -1.25
CAPN3-208ENST00000397204 IFI44LQ53G44 452 aa7.24□□□□□ -1.25
CAPN3-208ENST00000397204 FBLN7Q53RD9 439 aa7.24□□□□□ -1.25
CAPN3-208ENST00000397204 ZBTB37Q5TC79 503 aa7.24□□□□□ -1.25
CAPN3-208ENST00000397204 RUSC1-AS1Q66K80 236 aa7.24□□□□□ -1.25
CAPN3-208ENST00000397204 CORO6Q6QEF8 472 aa7.24□□□□□ -1.25
CAPN3-208ENST00000397204 FKBP9P1Q75LS8 142 aa7.24□□□□□ -1.25
CAPN3-208ENST00000397204 CBLL1Q75N03 491 aa7.24□□□□□ -1.25
CAPN3-208ENST00000397204 TSEN54Q7Z6J9 526 aaKnown RBP7.24□□□□□ -1.25
CAPN3-208ENST00000397204 VTCN1Q7Z7D3 282 aa7.24□□□□□ -1.25
CAPN3-208ENST00000397204 SPERTQ8NA61 448 aa7.24□□□□□ -1.25
CAPN3-208ENST00000397204 SLC7A13Q8TCU3 470 aa7.24□□□□□ -1.25
CAPN3-208ENST00000397204 NPRL2Q8WTW4 380 aa7.24□□□□□ -1.25
CAPN3-208ENST00000397204 SPRYD4Q8WW59 207 aaPredicted RBP7.24□□□□□ -1.25
CAPN3-208ENST00000397204 SLCO4A1Q96BD0 722 aa7.24□□□□□ -1.25
CAPN3-208ENST00000397204 TECTBQ96PL2 329 aa7.24□□□□□ -1.25
CAPN3-208ENST00000397204 PITX2Q99697 317 aa7.24□□□□□ -1.25
CAPN3-208ENST00000397204 SIRPDQ9H106 197 aa7.24□□□□□ -1.25
CAPN3-208ENST00000397204 UFSP2Q9NUQ7 469 aa7.24□□□□□ -1.25
CAPN3-208ENST00000397204 RPS6KA6Q9UK32 745 aa7.24□□□□□ -1.25
CAPN3-208ENST00000397204 B9D1Q9UPM9 204 aa7.24□□□□□ -1.25
CAPN3-208ENST00000397204 ENPP4Q9Y6X5 453 aa7.24□□□□□ -1.25
CAPN3-208ENST00000397204 IGLV1-36A0A0B4J1U3 117 aa7.23□□□□□ -1.25
CAPN3-208ENST00000397204 CD300LBA8K4G0 201 aa7.23□□□□□ -1.25
CAPN3-208ENST00000397204 HMGB1P1B2RPK0 211 aaPredicted RBP7.23□□□□□ -1.25
CAPN3-208ENST00000397204 F5H5K5 113 aa7.23□□□□□ -1.25
CAPN3-208ENST00000397204 CXCR6O00574 342 aa7.23□□□□□ -1.25
CAPN3-208ENST00000397204 GSTA4O15217 222 aa7.23□□□□□ -1.25
CAPN3-208ENST00000397204 ADAM20O43506 726 aa7.23□□□□□ -1.25
CAPN3-208ENST00000397204 ZNF682O95780 498 aa7.23□□□□□ -1.25
CAPN3-208ENST00000397204 IGHV4-59P01825 116 aa7.23□□□□□ -1.25
CAPN3-208ENST00000397204 CA6P23280 308 aa7.23□□□□□ -1.25
CAPN3-208ENST00000397204 TPTEP56180 551 aa7.23□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms