RNA–Protein interactions for RNA: ENST00000397117.5

SEC13-209, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 5 BASIC

Gene SEC13, Length 1,603 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-209ENST00000397117 ZNF283Q8N7M2 679 aa11.51□□□□□ -0.57
SEC13-209ENST00000397117 C1orf162Q8NEQ5 155 aaPredicted RBP11.51□□□□□ -0.57
SEC13-209ENST00000397117 OR5AK2Q8NH90 309 aa11.51□□□□□ -0.57
SEC13-209ENST00000397117 OR1F12Q8NHA8 337 aa11.51□□□□□ -0.57
SEC13-209ENST00000397117 AKR7LQ8NHP1 331 aa11.51□□□□□ -0.57
SEC13-209ENST00000397117 FGFBP3Q8TAT2 258 aa11.51□□□□□ -0.57
SEC13-209ENST00000397117 KCNJ15Q99712 375 aa11.51□□□□□ -0.57
SEC13-209ENST00000397117 MDFIQ99750 246 aa11.51□□□□□ -0.57
SEC13-209ENST00000397117 COMMD4Q9H0A8 199 aa11.51□□□□□ -0.57
SEC13-209ENST00000397117 WNT5BQ9H1J7 359 aa11.51□□□□□ -0.57
SEC13-209ENST00000397117 FRRS1LQ9P0K9 344 aa11.51□□□□□ -0.57
SEC13-209ENST00000397117 COL6A5A8TX70 2615 aa11.51□□□□□ -0.57
SEC13-209ENST00000397117 TMEM212A6NML5 194 aa11.5□□□□□ -0.57
SEC13-209ENST00000397117 F5H5K5 113 aa11.5□□□□□ -0.57
SEC13-209ENST00000397117 SYNGR3O43761 229 aa11.5□□□□□ -0.57
SEC13-209ENST00000397117 GPRIN2O60269 458 aa11.5□□□□□ -0.57
SEC13-209ENST00000397117 SERPINA3P01011 423 aa11.5□□□□□ -0.57
SEC13-209ENST00000397117 HOXB1P14653 301 aaPredicted RBP11.5□□□□□ -0.57
SEC13-209ENST00000397117 CX3CR1P49238 355 aa11.5□□□□□ -0.57
SEC13-209ENST00000397117 MMP16P51512 607 aa11.5□□□□□ -0.57
SEC13-209ENST00000397117 CCR9P51686 369 aa11.5□□□□□ -0.57
SEC13-209ENST00000397117 PRKXP51817 358 aa11.5□□□□□ -0.57
SEC13-209ENST00000397117 PSMA6P60900 246 aaKnown RBP11.5□□□□□ -0.57
SEC13-209ENST00000397117 RAB1AP62820 205 aa11.5□□□□□ -0.57
SEC13-209ENST00000397117 PLP2Q04941 152 aa11.5□□□□□ -0.57
SEC13-209ENST00000397117 MFGE8Q08431 387 aaPredicted RBP11.5□□□□□ -0.57
SEC13-209ENST00000397117 GABRA6Q16445 453 aa11.5□□□□□ -0.57
SEC13-209ENST00000397117 CTF1Q16619 201 aa11.5□□□□□ -0.57
SEC13-209ENST00000397117 PABPC1L2AQ5JQF8 200 aa11.5□□□□□ -0.57
SEC13-209ENST00000397117 BCL2L15Q5TBC7 163 aa11.5□□□□□ -0.57
SEC13-209ENST00000397117 GDPGP1Q6ZNW5 385 aa11.5□□□□□ -0.57
SEC13-209ENST00000397117 BHLHA15Q7RTS1 189 aaPredicted RBP11.5□□□□□ -0.57
SEC13-209ENST00000397117 CATSPERDQ86XM0 798 aa11.5□□□□□ -0.57
SEC13-209ENST00000397117 PRSS35Q8N3Z0 413 aa11.5□□□□□ -0.57
SEC13-209ENST00000397117 ZNF676Q8N7Q3 588 aa11.5□□□□□ -0.57
SEC13-209ENST00000397117 RPL3LQ92901 407 aaKnown RBP11.5□□□□□ -0.57
SEC13-209ENST00000397117 RNF166Q96A37 237 aaPredicted RBP11.5□□□□□ -0.57
SEC13-209ENST00000397117 C4orf45Q96LM5 186 aa11.5□□□□□ -0.57
SEC13-209ENST00000397117 COQ7Q99807 217 aa11.5□□□□□ -0.57
SEC13-209ENST00000397117 PDCD1LG2Q9BQ51 273 aa11.5□□□□□ -0.57
SEC13-209ENST00000397117 BRD7Q9NPI1 651 aa11.5□□□□□ -0.57
SEC13-209ENST00000397117 ZNF224Q9NZL3 707 aa11.5□□□□□ -0.57
SEC13-209ENST00000397117 OR52A1Q9UKL2 312 aa11.5□□□□□ -0.57
SEC13-209ENST00000397117 ZNF281Q9Y2X9 895 aa11.5□□□□□ -0.57
SEC13-209ENST00000397117 SF3B6Q9Y3B4 125 aaKnown RBP11.5□□□□□ -0.57
SEC13-209ENST00000397117 ZANQ9Y493 2812 aa11.49□□□□□ -0.57
SEC13-209ENST00000397117 OR6C6A6NF89 314 aa11.49□□□□□ -0.57
SEC13-209ENST00000397117 KIAA1324LA8MWY0 1029 aaPredicted RBP11.49□□□□□ -0.57
SEC13-209ENST00000397117 GPX5O75715 221 aa11.49□□□□□ -0.57
SEC13-209ENST00000397117 RGS9O75916 674 aaPredicted RBP11.49□□□□□ -0.57
SEC13-209ENST00000397117 ZFPL1O95159 310 aa11.49□□□□□ -0.57
SEC13-209ENST00000397117 PNPP00491 289 aa11.49□□□□□ -0.57
SEC13-209ENST00000397117 IL32P24001 234 aa11.49□□□□□ -0.57
SEC13-209ENST00000397117 PCSK6P29122 969 aa11.49□□□□□ -0.57
SEC13-209ENST00000397117 CRYBB2P43320 205 aa11.49□□□□□ -0.57
SEC13-209ENST00000397117 SLC6A9P48067 706 aa11.49□□□□□ -0.57
SEC13-209ENST00000397117 TPTEP56180 551 aa11.49□□□□□ -0.57
SEC13-209ENST00000397117 TUBA1BP68363 451 aa11.49□□□□□ -0.57
SEC13-209ENST00000397117 TSC22D1Q15714 1073 aa11.49□□□□□ -0.57
SEC13-209ENST00000397117 GSG1Q2KHT4 349 aa11.49□□□□□ -0.57
SEC13-209ENST00000397117 ODF4Q2M2E3 257 aa11.49□□□□□ -0.57
SEC13-209ENST00000397117 WDR38Q5JTN6 314 aa11.49□□□□□ -0.57
SEC13-209ENST00000397117 SFRP5Q5T4F7 317 aa11.49□□□□□ -0.57
SEC13-209ENST00000397117 ZNF474Q6S9Z5 364 aaPredicted RBP11.49□□□□□ -0.57
SEC13-209ENST00000397117 TUBA1AQ71U36 451 aa11.49□□□□□ -0.57
SEC13-209ENST00000397117 PGLYRP3Q96LB9 341 aa11.49□□□□□ -0.57
SEC13-209ENST00000397117 HDHD5Q9BXW7 423 aa11.49□□□□□ -0.57
SEC13-209ENST00000397117 MOB1AQ9H8S9 216 aa11.49□□□□□ -0.57
SEC13-209ENST00000397117 N6AMT1Q9Y5N5 214 aa11.49□□□□□ -0.57
SEC13-209ENST00000397117 IQCMA0A1B0GVH7 501 aa11.49□□□□□ -0.57
SEC13-209ENST00000397117 TRDV1A0A1B0GX56 115 aa11.49□□□□□ -0.57
SEC13-209ENST00000397117 OR4C45A6NMZ5 311 aa11.49□□□□□ -0.57
SEC13-209ENST00000397117 A8MXE2 369 aa11.49□□□□□ -0.57
SEC13-209ENST00000397117 M0R135 149 aa11.49□□□□□ -0.57
SEC13-209ENST00000397117 SLC22A1O15245 554 aa11.49□□□□□ -0.57
SEC13-209ENST00000397117 SRSF10O75494 262 aaKnown RBP11.49□□□□□ -0.57
SEC13-209ENST00000397117 ANXA2P07355 339 aaKnown RBP11.49□□□□□ -0.57
SEC13-209ENST00000397117 ZNF121P58317 390 aaPredicted RBP11.49□□□□□ -0.57
SEC13-209ENST00000397117 VBP1P61758 197 aa11.49□□□□□ -0.57
SEC13-209ENST00000397117 FABP5Q01469 135 aa11.49□□□□□ -0.57
SEC13-209ENST00000397117 YIF1BQ5BJH7 314 aa11.49□□□□□ -0.57
SEC13-209ENST00000397117 C17orf78Q8N4C9 275 aa11.49□□□□□ -0.57
SEC13-209ENST00000397117 ABHD4Q8TB40 342 aa11.49□□□□□ -0.57
SEC13-209ENST00000397117 RPS4Y2Q8TD47 263 aa11.49□□□□□ -0.57
SEC13-209ENST00000397117 ZNF799Q96GE5 643 aa11.49□□□□□ -0.57
SEC13-209ENST00000397117 DACH2Q96NX9 599 aa11.49□□□□□ -0.57
SEC13-209ENST00000397117 PBOV1Q9GZY1 135 aa11.49□□□□□ -0.57
SEC13-209ENST00000397117 FAM206AQ9NX38 181 aa11.49□□□□□ -0.57
SEC13-209ENST00000397117 ATPIF1Q9UII2 106 aa11.49□□□□□ -0.57
SEC13-209ENST00000397117 SLC22A13Q9Y226 551 aa11.49□□□□□ -0.57
SEC13-209ENST00000397117 GSTK1Q9Y2Q3 226 aa11.49□□□□□ -0.57
SEC13-209ENST00000397117 HIVEP2P31629 2446 aa11.48□□□□□ -0.57
SEC13-209ENST00000397117 ZNF503-AS2A6NEH8 195 aa11.48□□□□□ -0.57
SEC13-209ENST00000397117 ACOD1A6NK06 481 aa11.48□□□□□ -0.57
SEC13-209ENST00000397117 GABRPO00591 440 aa11.48□□□□□ -0.57
SEC13-209ENST00000397117 UBCP0CG48 685 aaKnown RBP11.48□□□□□ -0.57
SEC13-209ENST00000397117 GALP22466 123 aa11.48□□□□□ -0.57
SEC13-209ENST00000397117 KIR3DL2P43630 455 aa11.48□□□□□ -0.57
SEC13-209ENST00000397117 NCS1P62166 190 aa11.48□□□□□ -0.57
SEC13-209ENST00000397117 C22orf42Q6IC83 251 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms