RNA–Protein interactions for RNA: ENST00000394892.2

ATG4A-205, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 3

Gene ATG4A, Length 935 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-205ENST00000394892 PTBP3O95758 552 aaKnown RBP7.4□□□□□ -1.22
ATG4A-205ENST00000394892 HLA-DQA2P01906 255 aa7.4□□□□□ -1.22
ATG4A-205ENST00000394892 PPIAL4FP0DN26 164 aa7.4□□□□□ -1.22
ATG4A-205ENST00000394892 TNFRSF1AP19438 455 aa7.4□□□□□ -1.22
ATG4A-205ENST00000394892 PRKACGP22612 351 aa7.4□□□□□ -1.22
ATG4A-205ENST00000394892 MDH2P40926 338 aaKnown RBP7.4□□□□□ -1.22
ATG4A-205ENST00000394892 GATA4P43694 442 aa7.4□□□□□ -1.22
ATG4A-205ENST00000394892 PRKXP51817 358 aa7.4□□□□□ -1.22
ATG4A-205ENST00000394892 MNAT1P51948 309 aa7.4□□□□□ -1.22
ATG4A-205ENST00000394892 HILS1P60008 231 aa7.4□□□□□ -1.22
ATG4A-205ENST00000394892 ELF3P78545 371 aaPredicted RBP7.4□□□□□ -1.22
ATG4A-205ENST00000394892 PAX8Q06710 450 aa7.4□□□□□ -1.22
ATG4A-205ENST00000394892 ECH1Q13011 328 aa7.4□□□□□ -1.22
ATG4A-205ENST00000394892 ZNF154Q13106 437 aa7.4□□□□□ -1.22
ATG4A-205ENST00000394892 TEX30Q5JUR7 227 aa7.4□□□□□ -1.22
ATG4A-205ENST00000394892 USP43Q70EL4 1123 aa7.4□□□□□ -1.22
ATG4A-205ENST00000394892 SPATC1Q76KD6 591 aa7.4□□□□□ -1.22
ATG4A-205ENST00000394892 DCXRQ7Z4W1 244 aa7.4□□□□□ -1.22
ATG4A-205ENST00000394892 PEG10Q86TG7 708 aaKnown RBP7.4□□□□□ -1.22
ATG4A-205ENST00000394892 WDR86Q86TI4 376 aa7.4□□□□□ -1.22
ATG4A-205ENST00000394892 ARHGAP24Q8N264 748 aa7.4□□□□□ -1.22
ATG4A-205ENST00000394892 PROKR2Q8NFJ6 384 aa7.4□□□□□ -1.22
ATG4A-205ENST00000394892 OR4M2Q8NGB6 313 aa7.4□□□□□ -1.22
ATG4A-205ENST00000394892 OR10G2Q8NGC3 310 aa7.4□□□□□ -1.22
ATG4A-205ENST00000394892 ASB9Q96DX5 294 aa7.4□□□□□ -1.22
ATG4A-205ENST00000394892 ZNF799Q96GE5 643 aa7.4□□□□□ -1.22
ATG4A-205ENST00000394892 COG8Q96MW5 612 aa7.4□□□□□ -1.22
ATG4A-205ENST00000394892 ZNF48Q96MX3 618 aaPredicted RBP7.4□□□□□ -1.22
ATG4A-205ENST00000394892 ZNF582Q96NG8 517 aaPredicted RBP7.4□□□□□ -1.22
ATG4A-205ENST00000394892 THTPAQ9BU02 230 aa7.4□□□□□ -1.22
ATG4A-205ENST00000394892 MUC13Q9H3R2 512 aa7.4□□□□□ -1.22
ATG4A-205ENST00000394892 MARCH7Q9H992 704 aa7.4□□□□□ -1.22
ATG4A-205ENST00000394892 NTN4Q9HB63 628 aa7.4□□□□□ -1.22
ATG4A-205ENST00000394892 TBC1D23Q9NUY8 699 aa7.4□□□□□ -1.22
ATG4A-205ENST00000394892 ZNF69Q9UC07 566 aa7.4□□□□□ -1.22
ATG4A-205ENST00000394892 KCNG2Q9UJ96 466 aa7.4□□□□□ -1.22
ATG4A-205ENST00000394892 INSIG2Q9Y5U4 225 aa7.4□□□□□ -1.22
ATG4A-205ENST00000394892 DHRS12A0PJE2 317 aa7.39□□□□□ -1.23
ATG4A-205ENST00000394892 RAP2AP10114 183 aa7.39□□□□□ -1.23
ATG4A-205ENST00000394892 CA6P23280 308 aa7.39□□□□□ -1.23
ATG4A-205ENST00000394892 TNFSF4P23510 183 aa7.39□□□□□ -1.23
ATG4A-205ENST00000394892 CD200P41217 278 aa7.39□□□□□ -1.23
ATG4A-205ENST00000394892 ENTPD1P49961 510 aa7.39□□□□□ -1.23
ATG4A-205ENST00000394892 ZNF181Q2M3W8 571 aa7.39□□□□□ -1.23
ATG4A-205ENST00000394892 ZNF404Q494X3 552 aa7.39□□□□□ -1.23
ATG4A-205ENST00000394892 RPL13AP3Q6NVV1 102 aa7.39□□□□□ -1.23
ATG4A-205ENST00000394892 ZNF826PQ6ZT77 177 aa7.39□□□□□ -1.23
ATG4A-205ENST00000394892 KLBQ86Z14 1044 aa7.39□□□□□ -1.23
ATG4A-205ENST00000394892 C11orf53Q8IXP5 236 aa7.39□□□□□ -1.23
ATG4A-205ENST00000394892 TIGD4Q8IY51 512 aa7.39□□□□□ -1.23
ATG4A-205ENST00000394892 LINC00471Q8N535 108 aa7.39□□□□□ -1.23
ATG4A-205ENST00000394892 BBS1Q8NFJ9 593 aa7.39□□□□□ -1.23
ATG4A-205ENST00000394892 OR2T33Q8NG76 320 aa7.39□□□□□ -1.23
ATG4A-205ENST00000394892 OR52L1Q8NGH7 329 aa7.39□□□□□ -1.23
ATG4A-205ENST00000394892 OR5L1Q8NGL2 311 aa7.39□□□□□ -1.23
ATG4A-205ENST00000394892 OR2AJ1Q8NGZ0 328 aa7.39□□□□□ -1.23
ATG4A-205ENST00000394892 OR2T4Q8NH00 348 aa7.39□□□□□ -1.23
ATG4A-205ENST00000394892 Q8TCH9 128 aa7.39□□□□□ -1.23
ATG4A-205ENST00000394892 TAF15Q92804 592 aaKnown RBP eCLIP7.39□□□□□ -1.23
ATG4A-205ENST00000394892 SPSB4Q96A44 273 aa7.39□□□□□ -1.23
ATG4A-205ENST00000394892 SGK3Q96BR1 496 aa7.39□□□□□ -1.23
ATG4A-205ENST00000394892 SLAMF6Q96DU3 332 aa7.39□□□□□ -1.23
ATG4A-205ENST00000394892 CDADC1Q9BWV3 514 aa7.39□□□□□ -1.23
ATG4A-205ENST00000394892 SUCNR1Q9BXA5 334 aa7.39□□□□□ -1.23
ATG4A-205ENST00000394892 FGF23Q9GZV9 251 aaPredicted RBP7.39□□□□□ -1.23
ATG4A-205ENST00000394892 C1orf21Q9H246 121 aa7.39□□□□□ -1.23
ATG4A-205ENST00000394892 CMC2Q9NRP2 79 aa7.39□□□□□ -1.23
ATG4A-205ENST00000394892 UFSP2Q9NUQ7 469 aa7.39□□□□□ -1.23
ATG4A-205ENST00000394892 TMEM100Q9NV29 134 aa7.39□□□□□ -1.23
ATG4A-205ENST00000394892 CTSZQ9UBR2 303 aa7.39□□□□□ -1.23
ATG4A-205ENST00000394892 PRPF19Q9UMS4 504 aaKnown RBP7.39□□□□□ -1.23
ATG4A-205ENST00000394892 KLHDC2Q9Y2U9 406 aa7.39□□□□□ -1.23
ATG4A-205ENST00000394892 IGHV3OR16-10A0A075B7F0 116 aa7.38□□□□□ -1.23
ATG4A-205ENST00000394892 TCRBV3S1A0A5B6 114 aa7.38□□□□□ -1.23
ATG4A-205ENST00000394892 PRR32B1ATL7 298 aa7.38□□□□□ -1.23
ATG4A-205ENST00000394892 C22orf46C9J442 243 aa7.38□□□□□ -1.23
ATG4A-205ENST00000394892 SURF4O15260 269 aa7.38□□□□□ -1.23
ATG4A-205ENST00000394892 FOXH1O75593 365 aa7.38□□□□□ -1.23
ATG4A-205ENST00000394892 FSTL3O95633 263 aa7.38□□□□□ -1.23
ATG4A-205ENST00000394892 CST1P01037 141 aa7.38□□□□□ -1.23
ATG4A-205ENST00000394892 SPARCP09486 303 aa7.38□□□□□ -1.23
ATG4A-205ENST00000394892 IGHV4-38-2P0DP08 117 aa7.38□□□□□ -1.23
ATG4A-205ENST00000394892 ZNF823P16415 610 aa7.38□□□□□ -1.23
ATG4A-205ENST00000394892 FMO3P31513 532 aa7.38□□□□□ -1.23
ATG4A-205ENST00000394892 GRK5P34947 590 aa7.38□□□□□ -1.23
ATG4A-205ENST00000394892 OPRL1P41146 370 aa7.38□□□□□ -1.23
ATG4A-205ENST00000394892 SRP9P49458 86 aaKnown RBP7.38□□□□□ -1.23
ATG4A-205ENST00000394892 TPTEP56180 551 aa7.38□□□□□ -1.23
ATG4A-205ENST00000394892 FAM98BQ52LJ0 330 aaKnown RBP7.38□□□□□ -1.23
ATG4A-205ENST00000394892 TMEM236Q5W0B7 351 aa7.38□□□□□ -1.23
ATG4A-205ENST00000394892 SLC27A4Q6P1M0 643 aa7.38□□□□□ -1.23
ATG4A-205ENST00000394892 SHISA2Q6UWI4 295 aa7.38□□□□□ -1.23
ATG4A-205ENST00000394892 DRAM2Q6UX65 266 aa7.38□□□□□ -1.23
ATG4A-205ENST00000394892 PGAP1Q75T13 922 aa7.38□□□□□ -1.23
ATG4A-205ENST00000394892 DPY19L4Q7Z388 723 aa7.38□□□□□ -1.23
ATG4A-205ENST00000394892 FGFRL1Q8N441 504 aa7.38□□□□□ -1.23
ATG4A-205ENST00000394892 BPIFB2Q8N4F0 458 aa7.38□□□□□ -1.23
ATG4A-205ENST00000394892 SPICQ8N5J4 248 aa7.38□□□□□ -1.23
ATG4A-205ENST00000394892 PAPD5Q8NDF8 572 aaKnown RBP7.38□□□□□ -1.23
ATG4A-205ENST00000394892 OR56B2PQ8NGI1 322 aa7.38□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms