RNA–Protein interactions for RNA: ENST00000394633.7

PCDHA1-202, Transcript of protocadherin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene PCDHA1, Length 2,204 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA1-202ENST00000394633 GKN2Q86XP6 184 aa16.31■□□□□ 0.2
PCDHA1-202ENST00000394633 OR1M1Q8NGA1 313 aa16.31■□□□□ 0.2
PCDHA1-202ENST00000394633 RNF133Q8WVZ7 376 aa16.31■□□□□ 0.2
PCDHA1-202ENST00000394633 NARS2Q96I59 477 aaKnown RBP16.31■□□□□ 0.2
PCDHA1-202ENST00000394633 PIGMQ9H3S5 423 aa16.31■□□□□ 0.2
PCDHA1-202ENST00000394633 PCDHB10Q9UN67 800 aa16.31■□□□□ 0.2
PCDHA1-202ENST00000394633 GPR179Q6PRD1 2367 aa16.31■□□□□ 0.2
PCDHA1-202ENST00000394633 EEF1E1-BLOC1S5C9J1V9 151 aa16.31■□□□□ 0.2
PCDHA1-202ENST00000394633 SSX5O60225 188 aa16.31■□□□□ 0.2
PCDHA1-202ENST00000394633 BPNT1O95861 308 aa16.31■□□□□ 0.2
PCDHA1-202ENST00000394633 AKR1C4P17516 323 aa16.31■□□□□ 0.2
PCDHA1-202ENST00000394633 VAMP1P23763 118 aa16.31■□□□□ 0.2
PCDHA1-202ENST00000394633 HNRNPKP61978 463 aaKnown RBP eCLIP16.31■□□□□ 0.2
PCDHA1-202ENST00000394633 OR7A5Q15622 319 aa16.31■□□□□ 0.2
PCDHA1-202ENST00000394633 LYSMD4Q5XG99 296 aa16.31■□□□□ 0.2
PCDHA1-202ENST00000394633 FAHD2BQ6P2I3 314 aaPredicted RBP16.31■□□□□ 0.2
PCDHA1-202ENST00000394633 C5orf46Q6UWT4 87 aa16.31■□□□□ 0.2
PCDHA1-202ENST00000394633 WDR5BQ86VZ2 330 aa16.31■□□□□ 0.2
PCDHA1-202ENST00000394633 MARC2Q969Z3 335 aa16.31■□□□□ 0.2
PCDHA1-202ENST00000394633 FAHD2AQ96GK7 314 aa16.31■□□□□ 0.2
PCDHA1-202ENST00000394633 PCDHB16Q9NRJ7 776 aa16.31■□□□□ 0.2
PCDHA1-202ENST00000394633 MED29Q9NX70 200 aa16.31■□□□□ 0.2
PCDHA1-202ENST00000394633 KCNK7Q9Y2U2 307 aa16.31■□□□□ 0.2
PCDHA1-202ENST00000394633 C2orf72A6NCS6 295 aa16.3■□□□□ 0.2
PCDHA1-202ENST00000394633 M0R296 226 aa16.3■□□□□ 0.2
PCDHA1-202ENST00000394633 NDUFA2O43678 99 aa16.3■□□□□ 0.2
PCDHA1-202ENST00000394633 PIAS2O75928 621 aa16.3■□□□□ 0.2
PCDHA1-202ENST00000394633 UNQ6126/PRO20091Q6UXV3 157 aa16.3■□□□□ 0.2
PCDHA1-202ENST00000394633 SLC22A24Q8N4F4 322 aa16.3■□□□□ 0.2
PCDHA1-202ENST00000394633 INO80EQ8NBZ0 244 aaPredicted RBP16.3■□□□□ 0.2
PCDHA1-202ENST00000394633 MVB12AQ96EY5 273 aa16.3■□□□□ 0.2
PCDHA1-202ENST00000394633 ZC3H10Q96K80 434 aaKnown RBP16.3■□□□□ 0.2
PCDHA1-202ENST00000394633 SLC6A15Q9H2J7 730 aa16.3■□□□□ 0.2
PCDHA1-202ENST00000394633 LMO7DNF2Z398 122 aa16.3■□□□□ 0.2
PCDHA1-202ENST00000394633 FBLP22087 321 aaKnown RBP16.3■□□□□ 0.2
PCDHA1-202ENST00000394633 EIF1AXP47813 144 aaKnown RBP16.3■□□□□ 0.2
PCDHA1-202ENST00000394633 DAP3P51398 398 aaKnown RBP16.3■□□□□ 0.2
PCDHA1-202ENST00000394633 POU3F1Q03052 451 aaPredicted RBP16.3■□□□□ 0.2
PCDHA1-202ENST00000394633 PABPC1L2AQ5JQF8 200 aa16.3■□□□□ 0.2
PCDHA1-202ENST00000394633 C16orf47Q6ZP98 133 aaPredicted RBP16.3■□□□□ 0.2
PCDHA1-202ENST00000394633 C17orf82Q86X59 251 aaPredicted RBP16.3■□□□□ 0.2
PCDHA1-202ENST00000394633 CCDC36Q8IYA8 594 aa16.3■□□□□ 0.2
PCDHA1-202ENST00000394633 OR1L3Q8NH93 324 aa16.3■□□□□ 0.2
PCDHA1-202ENST00000394633 SLAMF6Q96DU3 332 aa16.3■□□□□ 0.2
PCDHA1-202ENST00000394633 ASF1BQ9NVP2 202 aa16.3■□□□□ 0.2
PCDHA1-202ENST00000394633 MKL2Q9ULH7 1088 aa16.3■□□□□ 0.2
PCDHA1-202ENST00000394633 DBX1A6NMT0 343 aa16.29■□□□□ 0.2
PCDHA1-202ENST00000394633 ABCD4O14678 606 aa16.29■□□□□ 0.2
PCDHA1-202ENST00000394633 SYT7O43581 403 aa16.29■□□□□ 0.2
PCDHA1-202ENST00000394633 DUS4LO95620 317 aaKnown RBP16.29■□□□□ 0.2
PCDHA1-202ENST00000394633 PMP2P02689 132 aa16.29■□□□□ 0.2
PCDHA1-202ENST00000394633 CRHP06850 196 aa16.29■□□□□ 0.2
PCDHA1-202ENST00000394633 RAB3AP20336 220 aa16.29■□□□□ 0.2
PCDHA1-202ENST00000394633 UQCC3Q6UW78 93 aa16.29■□□□□ 0.2
PCDHA1-202ENST00000394633 LANCL3Q6ZV70 420 aa16.29■□□□□ 0.2
PCDHA1-202ENST00000394633 H1FNTQ75WM6 255 aaPredicted RBP16.29■□□□□ 0.2
PCDHA1-202ENST00000394633 RNF144BQ7Z419 303 aa16.29■□□□□ 0.2
PCDHA1-202ENST00000394633 DTWD2Q8NBA8 298 aa16.29■□□□□ 0.2
PCDHA1-202ENST00000394633 OR5AP2Q8NGF4 316 aa16.29■□□□□ 0.2
PCDHA1-202ENST00000394633 C11orf40Q8WZ69 217 aa16.29■□□□□ 0.2
PCDHA1-202ENST00000394633 ZDHHC12Q96GR4 267 aa16.29■□□□□ 0.2
PCDHA1-202ENST00000394633 UQCC2Q9BRT2 126 aa16.29■□□□□ 0.2
PCDHA1-202ENST00000394633 SELENOIQ9C0D9 397 aa16.29■□□□□ 0.2
PCDHA1-202ENST00000394633 VN1R1Q9GZP7 353 aa16.29■□□□□ 0.2
PCDHA1-202ENST00000394633 PBOV1Q9GZY1 135 aa16.29■□□□□ 0.2
PCDHA1-202ENST00000394633 ZNF304Q9HCX3 659 aa16.29■□□□□ 0.2
PCDHA1-202ENST00000394633 SLC5A6Q9Y289 635 aa16.29■□□□□ 0.2
PCDHA1-202ENST00000394633 ADAMTS9Q9P2N4 1935 aa16.29■□□□□ 0.2
PCDHA1-202ENST00000394633 ZNF208O43345 1280 aa16.29■□□□□ 0.2
PCDHA1-202ENST00000394633 PGAM2P15259 253 aa16.29■□□□□ 0.2
PCDHA1-202ENST00000394633 HSF1Q00613 529 aa16.29■□□□□ 0.2
PCDHA1-202ENST00000394633 SLC25A45Q8N413 288 aa16.29■□□□□ 0.2
PCDHA1-202ENST00000394633 OR10S1Q8NGN2 331 aa16.29■□□□□ 0.2
PCDHA1-202ENST00000394633 OR13C9Q8NGT0 318 aa16.29■□□□□ 0.2
PCDHA1-202ENST00000394633 OR2I1PQ8NGU4 316 aa16.29■□□□□ 0.2
PCDHA1-202ENST00000394633 OR10R2Q8NGX6 335 aa16.29■□□□□ 0.2
PCDHA1-202ENST00000394633 OR6S1Q8NH40 331 aa16.29■□□□□ 0.2
PCDHA1-202ENST00000394633 MARCH1Q8TCQ1 289 aa16.29■□□□□ 0.2
PCDHA1-202ENST00000394633 TMEM234Q8WY98 164 aa16.29■□□□□ 0.2
PCDHA1-202ENST00000394633 NICN1Q9BSH3 213 aa16.29■□□□□ 0.2
PCDHA1-202ENST00000394633 RAB19A4D1S5 217 aa16.28■□□□□ 0.2
PCDHA1-202ENST00000394633 C5orf51A6NDU8 294 aa16.28■□□□□ 0.2
PCDHA1-202ENST00000394633 TMEM14DPA8MWL7 114 aa16.28■□□□□ 0.2
PCDHA1-202ENST00000394633 FGF16O43320 207 aa16.28■□□□□ 0.2
PCDHA1-202ENST00000394633 ATG12O94817 140 aa16.28■□□□□ 0.2
PCDHA1-202ENST00000394633 IFNA6P05013 189 aa16.28■□□□□ 0.2
PCDHA1-202ENST00000394633 MYF5P13349 255 aa16.28■□□□□ 0.2
PCDHA1-202ENST00000394633 PSMB6P28072 239 aa16.28■□□□□ 0.2
PCDHA1-202ENST00000394633 SERPINF1P36955 418 aa16.28■□□□□ 0.2
PCDHA1-202ENST00000394633 CLDN6P56747 220 aa16.28■□□□□ 0.2
PCDHA1-202ENST00000394633 SHBQ15464 509 aa16.28■□□□□ 0.2
PCDHA1-202ENST00000394633 C1orf189Q5VU69 101 aa16.28■□□□□ 0.2
PCDHA1-202ENST00000394633 MFSD8Q8NHS3 518 aa16.28■□□□□ 0.2
PCDHA1-202ENST00000394633 PIK3IP1Q96FE7 263 aa16.28■□□□□ 0.2
PCDHA1-202ENST00000394633 CHMP1AQ9HD42 196 aaPredicted RBP16.28■□□□□ 0.2
PCDHA1-202ENST00000394633 PURGQ9UJV8 347 aaKnown RBP16.28■□□□□ 0.2
PCDHA1-202ENST00000394633 CSAG2Q9Y5P2 127 aa16.28■□□□□ 0.2
PCDHA1-202ENST00000394633 C13orf42A0A1B0GVH6 325 aa16.27■□□□□ 0.2
PCDHA1-202ENST00000394633 OR6C76A6NM76 312 aa16.27■□□□□ 0.2
PCDHA1-202ENST00000394633 F8VVB4 439 aa16.27■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 102.2 ms