RNA–Protein interactions for RNA: ENST00000394084.5

GAPVD1-205, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 1 (best) BASIC

Gene GAPVD1, Length 3,190 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-205ENST00000394084 ZNF345Q14585 488 aa12.39□□□□□ -0.43
GAPVD1-205ENST00000394084 TMPPEQ6ZT21 453 aa12.39□□□□□ -0.43
GAPVD1-205ENST00000394084 INO80EQ8NBZ0 244 aaPredicted RBP12.39□□□□□ -0.43
GAPVD1-205ENST00000394084 GAREM1Q9H706 876 aa12.39□□□□□ -0.43
GAPVD1-205ENST00000394084 LMAN1LQ9HAT1 526 aa12.39□□□□□ -0.43
GAPVD1-205ENST00000394084 SLC2A8Q9NY64 477 aa12.39□□□□□ -0.43
GAPVD1-205ENST00000394084 ZNF107Q9UII5 783 aaPredicted RBP12.39□□□□□ -0.43
GAPVD1-205ENST00000394084 A0A1W2PP11 408 aa12.38□□□□□ -0.43
GAPVD1-205ENST00000394084 EFSO43281 561 aa12.38□□□□□ -0.43
GAPVD1-205ENST00000394084 ICAM2P13598 275 aa12.38□□□□□ -0.43
GAPVD1-205ENST00000394084 ZNF20P17024 532 aa12.38□□□□□ -0.43
GAPVD1-205ENST00000394084 BCKDHBP21953 392 aa12.38□□□□□ -0.43
GAPVD1-205ENST00000394084 SERPINF1P36955 418 aa12.38□□□□□ -0.43
GAPVD1-205ENST00000394084 PPIAP62937 165 aaKnown RBP12.38□□□□□ -0.43
GAPVD1-205ENST00000394084 QRFPP83859 136 aa12.38□□□□□ -0.43
GAPVD1-205ENST00000394084 FOXK1P85037 733 aa12.38□□□□□ -0.43
GAPVD1-205ENST00000394084 ARMC10Q8N2F6 343 aa12.38□□□□□ -0.43
GAPVD1-205ENST00000394084 TMEM104Q8NE00 496 aa12.38□□□□□ -0.43
GAPVD1-205ENST00000394084 OR1S2Q8NGQ3 325 aa12.38□□□□□ -0.43
GAPVD1-205ENST00000394084 STT3BQ8TCJ2 826 aa12.38□□□□□ -0.43
GAPVD1-205ENST00000394084 TMEM41AQ96HV5 264 aa12.38□□□□□ -0.43
GAPVD1-205ENST00000394084 SERINC1Q9NRX5 453 aa12.38□□□□□ -0.43
GAPVD1-205ENST00000394084 KLRF1Q9NZS2 232 aa12.38□□□□□ -0.43
GAPVD1-205ENST00000394084 ARID1AO14497 2285 aa12.38□□□□□ -0.43
GAPVD1-205ENST00000394084 WDR87Q6ZQQ6 2873 aa12.38□□□□□ -0.43
GAPVD1-205ENST00000394084 TNFSF12-TNFSF13A0A0A6YY99 330 aa12.38□□□□□ -0.43
GAPVD1-205ENST00000394084 ARPC4-TTLL3A0A0A6YYG9 625 aa12.38□□□□□ -0.43
GAPVD1-205ENST00000394084 OR6C76A6NM76 312 aa12.38□□□□□ -0.43
GAPVD1-205ENST00000394084 DNASE2O00115 360 aaPredicted RBP12.38□□□□□ -0.43
GAPVD1-205ENST00000394084 BPNT1O95861 308 aa12.38□□□□□ -0.43
GAPVD1-205ENST00000394084 IL2RAP01589 272 aa12.38□□□□□ -0.43
GAPVD1-205ENST00000394084 PI3P19957 117 aa12.38□□□□□ -0.43
GAPVD1-205ENST00000394084 SRSF4Q08170 494 aaKnown RBP12.38□□□□□ -0.43
GAPVD1-205ENST00000394084 C17orf67Q0P5P2 114 aa12.38□□□□□ -0.43
GAPVD1-205ENST00000394084 ZP4Q12836 540 aa12.38□□□□□ -0.43
GAPVD1-205ENST00000394084 MFAP5Q13361 173 aa12.38□□□□□ -0.43
GAPVD1-205ENST00000394084 INPP5JQ15735 1006 aaPredicted RBP12.38□□□□□ -0.43
GAPVD1-205ENST00000394084 DEGS2Q6QHC5 323 aa12.38□□□□□ -0.43
GAPVD1-205ENST00000394084 GLIPR1L1Q6UWM5 242 aa12.38□□□□□ -0.43
GAPVD1-205ENST00000394084 C5orf46Q6UWT4 87 aa12.38□□□□□ -0.43
GAPVD1-205ENST00000394084 PLXDC1Q8IUK5 500 aa12.38□□□□□ -0.43
GAPVD1-205ENST00000394084 D2HGDHQ8N465 521 aa12.38□□□□□ -0.43
GAPVD1-205ENST00000394084 ZDHHC22Q8N966 263 aa12.38□□□□□ -0.43
GAPVD1-205ENST00000394084 OR5D14Q8NGL3 314 aa12.38□□□□□ -0.43
GAPVD1-205ENST00000394084 OR10R2Q8NGX6 335 aa12.38□□□□□ -0.43
GAPVD1-205ENST00000394084 OR4K15Q8NH41 348 aa12.38□□□□□ -0.43
GAPVD1-205ENST00000394084 ROBO4Q8WZ75 1007 aa12.38□□□□□ -0.43
GAPVD1-205ENST00000394084 ZC3H10Q96K80 434 aaKnown RBP12.38□□□□□ -0.43
GAPVD1-205ENST00000394084 FAM71F1Q96KD3 344 aaPredicted RBP12.38□□□□□ -0.43
GAPVD1-205ENST00000394084 SLC22A11Q9NSA0 550 aa12.38□□□□□ -0.43
GAPVD1-205ENST00000394084 EFNA2O43921 213 aa12.38□□□□□ -0.43
GAPVD1-205ENST00000394084 GP1BAP07359 652 aa12.38□□□□□ -0.43
GAPVD1-205ENST00000394084 GIMD1P0DJR0 217 aa12.38□□□□□ -0.43
GAPVD1-205ENST00000394084 PGAM2P15259 253 aa12.38□□□□□ -0.43
GAPVD1-205ENST00000394084 OGFOD3Q6PK18 319 aa12.38□□□□□ -0.43
GAPVD1-205ENST00000394084 ABHD12BQ7Z5M8 362 aaPredicted RBP12.38□□□□□ -0.43
GAPVD1-205ENST00000394084 ST8SIA1Q92185 356 aa12.38□□□□□ -0.43
GAPVD1-205ENST00000394084 DCUN1D4Q92564 292 aa12.38□□□□□ -0.43
GAPVD1-205ENST00000394084 DDIT4LQ96D03 193 aa12.38□□□□□ -0.43
GAPVD1-205ENST00000394084 RAB33BQ9H082 229 aa12.38□□□□□ -0.43
GAPVD1-205ENST00000394084 CYB5R1Q9UHQ9 305 aa12.38□□□□□ -0.43
GAPVD1-205ENST00000394084 PCDHB10Q9UN67 800 aa12.38□□□□□ -0.43
GAPVD1-205ENST00000394084 CSAG2Q9Y5P2 127 aa12.38□□□□□ -0.43
GAPVD1-205ENST00000394084 A0A0A6YYD4 124 aa12.37□□□□□ -0.43
GAPVD1-205ENST00000394084 VSTM2BA6NLU5 285 aa12.37□□□□□ -0.43
GAPVD1-205ENST00000394084 SOCS1O15524 211 aa12.37□□□□□ -0.43
GAPVD1-205ENST00000394084 ZNF208O43345 1280 aa12.37□□□□□ -0.43
GAPVD1-205ENST00000394084 DUX1O43812 170 aa12.37□□□□□ -0.43
GAPVD1-205ENST00000394084 NPY4RP50391 375 aa12.37□□□□□ -0.43
GAPVD1-205ENST00000394084 PAN3Q58A45 887 aaKnown RBP12.37□□□□□ -0.43
GAPVD1-205ENST00000394084 TMEM17Q86X19 198 aa12.37□□□□□ -0.43
GAPVD1-205ENST00000394084 AIFM2Q9BRQ8 373 aa12.37□□□□□ -0.43
GAPVD1-205ENST00000394084 A0A1W2PNR3 127 aa12.37□□□□□ -0.43
GAPVD1-205ENST00000394084 LIPT2A6NK58 231 aa12.37□□□□□ -0.43
GAPVD1-205ENST00000394084 APOBEC1P41238 236 aaKnown RBP12.37□□□□□ -0.43
GAPVD1-205ENST00000394084 OR3A4PP47883 348 aa12.37□□□□□ -0.43
GAPVD1-205ENST00000394084 CLRN1P58418 232 aa12.37□□□□□ -0.43
GAPVD1-205ENST00000394084 SLC9A3R2Q15599 337 aa12.37□□□□□ -0.43
GAPVD1-205ENST00000394084 APCDD1LQ8NCL9 501 aa12.37□□□□□ -0.43
GAPVD1-205ENST00000394084 CHMP1AQ9HD42 196 aaPredicted RBP12.37□□□□□ -0.43
GAPVD1-205ENST00000394084 CA14Q9ULX7 337 aa12.37□□□□□ -0.43
GAPVD1-205ENST00000394084 MRPS28Q9Y2Q9 187 aaKnown RBP12.37□□□□□ -0.43
GAPVD1-205ENST00000394084 ASCC3Q8N3C0 2202 aaKnown RBP12.37□□□□□ -0.43
GAPVD1-205ENST00000394084 LAP3P28838 519 aa12.36□□□□□ -0.43
GAPVD1-205ENST00000394084 MYBPHQ13203 477 aa12.36□□□□□ -0.43
GAPVD1-205ENST00000394084 MICBQ29980 383 aa12.36□□□□□ -0.43
GAPVD1-205ENST00000394084 ZNF501Q96CX3 271 aaPredicted RBP12.36□□□□□ -0.43
GAPVD1-205ENST00000394084 ARPC5LQ9BPX5 153 aa12.36□□□□□ -0.43
GAPVD1-205ENST00000394084 LHFPL6Q9Y693 200 aa12.36□□□□□ -0.43
GAPVD1-205ENST00000394084 A0A0B4J2A0 478 aa12.36□□□□□ -0.43
GAPVD1-205ENST00000394084 TRBV11-1A0A0K0K1C0 115 aa12.36□□□□□ -0.43
GAPVD1-205ENST00000394084 PIAS2O75928 621 aa12.36□□□□□ -0.43
GAPVD1-205ENST00000394084 MISPQ8IVT2 679 aa12.36□□□□□ -0.43
GAPVD1-205ENST00000394084 PAQR8Q8TEZ7 354 aa12.36□□□□□ -0.43
GAPVD1-205ENST00000394084 WNT2BQ93097 391 aa12.36□□□□□ -0.43
GAPVD1-205ENST00000394084 LPAR5Q9H1C0 372 aa12.36□□□□□ -0.43
GAPVD1-205ENST00000394084 ZNF319Q9P2F9 582 aa12.36□□□□□ -0.43
GAPVD1-205ENST00000394084 B3GAT1Q9P2W7 334 aa12.36□□□□□ -0.43
GAPVD1-205ENST00000394084 ASH2LQ9UBL3 628 aa12.36□□□□□ -0.43
GAPVD1-205ENST00000394084 SHPKQ9UHJ6 478 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms