RNA–Protein interactions for RNA: ENST00000392456.3

CCDC50-202, Transcript of coiled-coil domain containing 50, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CCDC50, Length 2,454 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50-202ENST00000392456 hCG_1809904A0A1W2PP81 198 aa16.94■□□□□ 0.3
CCDC50-202ENST00000392456 A0A1W2PR64 198 aa16.94■□□□□ 0.3
CCDC50-202ENST00000392456 A0A1W2PRV1 198 aa16.94■□□□□ 0.3
CCDC50-202ENST00000392456 UBL3O95164 117 aa16.94■□□□□ 0.3
CCDC50-202ENST00000392456 HLA-DPB1P04440 258 aa16.94■□□□□ 0.3
CCDC50-202ENST00000392456 ITGA5P08648 1049 aa16.94■□□□□ 0.3
CCDC50-202ENST00000392456 OTX2P32243 289 aa16.94■□□□□ 0.3
CCDC50-202ENST00000392456 IFNGR2P38484 337 aa16.94■□□□□ 0.3
CCDC50-202ENST00000392456 GLP1RP43220 463 aa16.94■□□□□ 0.3
CCDC50-202ENST00000392456 PRKXP51817 358 aa16.94■□□□□ 0.3
CCDC50-202ENST00000392456 PPP1R32Q7Z5V6 425 aa16.94■□□□□ 0.3
CCDC50-202ENST00000392456 FAM26EQ8N5C1 309 aa16.94■□□□□ 0.3
CCDC50-202ENST00000392456 DUSP19Q8WTR2 217 aa16.94■□□□□ 0.3
CCDC50-202ENST00000392456 BPIFA2Q96DR5 249 aa16.94■□□□□ 0.3
CCDC50-202ENST00000392456 TMED9Q9BVK6 235 aa16.94■□□□□ 0.3
CCDC50-202ENST00000392456 TUBA4BQ9H853 241 aa16.94■□□□□ 0.3
CCDC50-202ENST00000392456 SEC61A2Q9H9S3 476 aa16.94■□□□□ 0.3
CCDC50-202ENST00000392456 TVP23BQ9NYZ1 205 aa16.94■□□□□ 0.3
CCDC50-202ENST00000392456 PCSK5Q92824 1860 aa16.94■□□□□ 0.3
CCDC50-202ENST00000392456 ITGB1BP1O14713 200 aa16.94■□□□□ 0.3
CCDC50-202ENST00000392456 TLX2O43763 284 aaPredicted RBP16.94■□□□□ 0.3
CCDC50-202ENST00000392456 CIDEAO60543 219 aa16.94■□□□□ 0.3
CCDC50-202ENST00000392456 CYC1P08574 325 aa16.94■□□□□ 0.3
CCDC50-202ENST00000392456 STAT5AP42229 794 aa16.94■□□□□ 0.3
CCDC50-202ENST00000392456 CDK5Q00535 292 aa16.94■□□□□ 0.3
CCDC50-202ENST00000392456 JMJD6Q6NYC1 403 aaPredicted RBP16.94■□□□□ 0.3
CCDC50-202ENST00000392456 LPCAT3Q6P1A2 487 aa16.94■□□□□ 0.3
CCDC50-202ENST00000392456 OR51S1Q8NGJ8 323 aa16.94■□□□□ 0.3
CCDC50-202ENST00000392456 OR5L2Q8NGL0 311 aa16.94■□□□□ 0.3
CCDC50-202ENST00000392456 HAVCR2Q8TDQ0 301 aa16.94■□□□□ 0.3
CCDC50-202ENST00000392456 ICAM5Q9UMF0 924 aa16.94■□□□□ 0.3
CCDC50-202ENST00000392456 FARSAQ9Y285 508 aaKnown RBP16.94■□□□□ 0.3
CCDC50-202ENST00000392456 MRPS18BQ9Y676 258 aaKnown RBP16.94■□□□□ 0.3
CCDC50-202ENST00000392456 ZNF705EA8MWA4 302 aaPredicted RBP16.93■□□□□ 0.3
CCDC50-202ENST00000392456 SYT14P1Q58G82 188 aa16.93■□□□□ 0.3
CCDC50-202ENST00000392456 C1QL4Q86Z23 238 aa16.93■□□□□ 0.3
CCDC50-202ENST00000392456 NKAIN3Q8N8D7 197 aa16.93■□□□□ 0.3
CCDC50-202ENST00000392456 NOL4LQ96MY1 436 aaPredicted RBP16.93■□□□□ 0.3
CCDC50-202ENST00000392456 NOX3Q9HBY0 568 aa16.93■□□□□ 0.3
CCDC50-202ENST00000392456 MOKQ9UQ07 419 aa16.93■□□□□ 0.3
CCDC50-202ENST00000392456 MED31Q9Y3C7 131 aa16.93■□□□□ 0.3
CCDC50-202ENST00000392456 GSTZ1O43708 216 aaPredicted RBP16.93■□□□□ 0.3
CCDC50-202ENST00000392456 DKK1O94907 266 aa16.93■□□□□ 0.3
CCDC50-202ENST00000392456 CH25HO95992 272 aa16.93■□□□□ 0.3
CCDC50-202ENST00000392456 F10P00742 488 aa16.93■□□□□ 0.3
CCDC50-202ENST00000392456 GSTM3P21266 225 aa16.93■□□□□ 0.3
CCDC50-202ENST00000392456 ART1P52961 327 aa16.93■□□□□ 0.3
CCDC50-202ENST00000392456 SOX8P57073 446 aa16.93■□□□□ 0.3
CCDC50-202ENST00000392456 SORDQ00796 357 aa16.93■□□□□ 0.3
CCDC50-202ENST00000392456 NKAPLQ5M9Q1 402 aa16.93■□□□□ 0.3
CCDC50-202ENST00000392456 SLC25A30Q5SVS4 291 aa16.93■□□□□ 0.3
CCDC50-202ENST00000392456 OR10G3Q8NGC4 313 aa16.93■□□□□ 0.3
CCDC50-202ENST00000392456 OR13C2Q8NGS9 318 aa16.93■□□□□ 0.3
CCDC50-202ENST00000392456 RASL10BQ96S79 203 aa16.93■□□□□ 0.3
CCDC50-202ENST00000392456 UTP23Q9BRU9 249 aaKnown RBP16.93■□□□□ 0.3
CCDC50-202ENST00000392456 HRASLSQ9HDD0 168 aa16.93■□□□□ 0.3
CCDC50-202ENST00000392456 CD8B2A6NJW9 211 aa16.92■□□□□ 0.3
CCDC50-202ENST00000392456 CD8BP10966 210 aa16.92■□□□□ 0.3
CCDC50-202ENST00000392456 ITPKBP27987 946 aa16.92■□□□□ 0.3
CCDC50-202ENST00000392456 MAGEB1P43366 347 aa16.92■□□□□ 0.3
CCDC50-202ENST00000392456 GAS1P54826 345 aa16.92■□□□□ 0.3
CCDC50-202ENST00000392456 PITPNAQ00169 270 aa16.92■□□□□ 0.3
CCDC50-202ENST00000392456 Q0VFX4 171 aa16.92■□□□□ 0.3
CCDC50-202ENST00000392456 TMEM164Q5U3C3 297 aa16.92■□□□□ 0.3
CCDC50-202ENST00000392456 ETFRF1Q6IPR1 90 aa16.92■□□□□ 0.3
CCDC50-202ENST00000392456 ADAM5Q6NVV9 412 aa16.92■□□□□ 0.3
CCDC50-202ENST00000392456 ZNF620Q6ZNG0 422 aa16.92■□□□□ 0.3
CCDC50-202ENST00000392456 KCNRGQ8N5I3 272 aa16.92■□□□□ 0.3
CCDC50-202ENST00000392456 RELTQ969Z4 430 aa16.92■□□□□ 0.3
CCDC50-202ENST00000392456 DNAJA3Q96EY1 480 aa16.92■□□□□ 0.3
CCDC50-202ENST00000392456 SAMD8Q96LT4 415 aa16.92■□□□□ 0.3
CCDC50-202ENST00000392456 ZFP3Q96NJ6 502 aa16.92■□□□□ 0.3
CCDC50-202ENST00000392456 EXPH5Q8NEV8 1989 aa16.92■□□□□ 0.3
CCDC50-202ENST00000392456 IGKV1D-42A0A075B6H8 117 aa16.92■□□□□ 0.3
CCDC50-202ENST00000392456 TRAV27A0A087WT01 109 aa16.92■□□□□ 0.3
CCDC50-202ENST00000392456 A0A087WUJ7 227 aa16.92■□□□□ 0.3
CCDC50-202ENST00000392456 NSG1A0A0A6YYJ2 146 aa16.92■□□□□ 0.3
CCDC50-202ENST00000392456 A0A1W2PPH5 198 aa16.92■□□□□ 0.3
CCDC50-202ENST00000392456 A0A1W2PQD3 144 aa16.92■□□□□ 0.3
CCDC50-202ENST00000392456 SULT2B1O00204 365 aa16.92■□□□□ 0.3
CCDC50-202ENST00000392456 DIRAS3O95661 229 aa16.92■□□□□ 0.3
CCDC50-202ENST00000392456 MNDAP41218 407 aa16.92■□□□□ 0.3
CCDC50-202ENST00000392456 EIF3IQ13347 325 aaKnown RBP16.92■□□□□ 0.3
CCDC50-202ENST00000392456 SCGB2B2Q4G0G5 96 aa16.92■□□□□ 0.3
CCDC50-202ENST00000392456 THSD4Q6ZMP0 1018 aa16.92■□□□□ 0.3
CCDC50-202ENST00000392456 OR1J4Q8NGS1 313 aa16.92■□□□□ 0.3
CCDC50-202ENST00000392456 OR13C3Q8NGS6 347 aa16.92■□□□□ 0.3
CCDC50-202ENST00000392456 OR51A7Q8NH64 312 aa16.92■□□□□ 0.3
CCDC50-202ENST00000392456 RASD1Q9Y272 281 aa16.92■□□□□ 0.3
CCDC50-202ENST00000392456 GPR52Q9Y2T5 361 aa16.92■□□□□ 0.3
CCDC50-202ENST00000392456 ALPK2Q86TB3 2170 aa16.92■□□□□ 0.3
CCDC50-202ENST00000392456 CD79AP11912 226 aa16.91■□□□□ 0.3
CCDC50-202ENST00000392456 AKR1C3P42330 323 aa16.91■□□□□ 0.3
CCDC50-202ENST00000392456 MECP2P51608 486 aaKnown RBP16.91■□□□□ 0.3
CCDC50-202ENST00000392456 FHL1Q13642 323 aa16.91■□□□□ 0.3
CCDC50-202ENST00000392456 IL10RAQ13651 578 aa16.91■□□□□ 0.3
CCDC50-202ENST00000392456 KCNMB1Q16558 191 aa16.91■□□□□ 0.3
CCDC50-202ENST00000392456 DCAF12L2Q5VW00 463 aa16.91■□□□□ 0.3
CCDC50-202ENST00000392456 ZNF440Q8IYI8 595 aa16.91■□□□□ 0.3
CCDC50-202ENST00000392456 CPNE2Q96FN4 548 aaPredicted RBP16.91■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms