RNA–Protein interactions for RNA: ENST00000391970.3

PTPRC-205, Transcript of protein tyrosine phosphatase, receptor type C, humanhuman

TSL 1 (best)

Gene PTPRC, Length 408 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRC-205ENST00000391970 FAM25AB3EWG3 89 aa2.09□□□□□ -2.07
PTPRC-205ENST00000391970 FAM25CB3EWG5 89 aa2.09□□□□□ -2.07
PTPRC-205ENST00000391970 FAM25GB3EWG6 89 aa2.09□□□□□ -2.07
PTPRC-205ENST00000391970 TRIM49D1C9J1S8 452 aa2.09□□□□□ -2.07
PTPRC-205ENST00000391970 ATP6V1G2-DDX39BF2Z307 99 aa2.09□□□□□ -2.07
PTPRC-205ENST00000391970 PSTPIP1O43586 416 aa2.09□□□□□ -2.07
PTPRC-205ENST00000391970 TNFSF13O75888 250 aa2.09□□□□□ -2.07
PTPRC-205ENST00000391970 DCTN3O75935 186 aa2.09□□□□□ -2.07
PTPRC-205ENST00000391970 RPP14O95059 124 aaKnown RBP2.09□□□□□ -2.07
PTPRC-205ENST00000391970 CCNB2O95067 398 aa2.09□□□□□ -2.07
PTPRC-205ENST00000391970 MOSP00540 346 aa2.09□□□□□ -2.07
PTPRC-205ENST00000391970 CST1P01037 141 aa2.09□□□□□ -2.07
PTPRC-205ENST00000391970 IGHV2-5P01817 119 aa2.09□□□□□ -2.07
PTPRC-205ENST00000391970 IGHV4-34P06331 123 aa2.09□□□□□ -2.07
PTPRC-205ENST00000391970 CRYGBP07316 175 aa2.09□□□□□ -2.07
PTPRC-205ENST00000391970 ANXA5P08758 320 aa2.09□□□□□ -2.07
PTPRC-205ENST00000391970 KRT16P08779 473 aa2.09□□□□□ -2.07
PTPRC-205ENST00000391970 FBP1P09467 338 aa2.09□□□□□ -2.07
PTPRC-205ENST00000391970 CT62P0C5K7 136 aa2.09□□□□□ -2.07
PTPRC-205ENST00000391970 UBTFL1P0CB47 393 aaPredicted RBP2.09□□□□□ -2.07
PTPRC-205ENST00000391970 OCM2P0CE71 109 aa2.09□□□□□ -2.07
PTPRC-205ENST00000391970 OCMP0CE72 109 aaPredicted RBP2.09□□□□□ -2.07
PTPRC-205ENST00000391970 MCF2P10911 925 aa2.09□□□□□ -2.07
PTPRC-205ENST00000391970 CD36P16671 472 aa2.09□□□□□ -2.07
PTPRC-205ENST00000391970 TCP1P17987 556 aaKnown RBP2.09□□□□□ -2.07
PTPRC-205ENST00000391970 GDI1P31150 447 aa2.09□□□□□ -2.07
PTPRC-205ENST00000391970 HNRNPH3P31942 346 aaKnown RBP2.09□□□□□ -2.07
PTPRC-205ENST00000391970 DRD3P35462 400 aa2.09□□□□□ -2.07
PTPRC-205ENST00000391970 PCK1P35558 622 aa2.09□□□□□ -2.07
PTPRC-205ENST00000391970 ATP5C1P36542 298 aaKnown RBP2.09□□□□□ -2.07
PTPRC-205ENST00000391970 SYKP43405 635 aa2.09□□□□□ -2.07
PTPRC-205ENST00000391970 NPBWR2P48146 333 aa2.09□□□□□ -2.07
PTPRC-205ENST00000391970 EIF2B2P49770 351 aaKnown RBP2.09□□□□□ -2.07
PTPRC-205ENST00000391970 KCNJ2P63252 427 aa2.09□□□□□ -2.07
PTPRC-205ENST00000391970 SLC7A9P82251 487 aa2.09□□□□□ -2.07
PTPRC-205ENST00000391970 PDIA2Q13087 525 aaKnown RBP2.09□□□□□ -2.07
PTPRC-205ENST00000391970 CAPRIN1Q14444 709 aaKnown RBP2.09□□□□□ -2.07
PTPRC-205ENST00000391970 CDK10Q15131 360 aa2.09□□□□□ -2.07
PTPRC-205ENST00000391970 PSMD5Q16401 504 aa2.09□□□□□ -2.07
PTPRC-205ENST00000391970 FAM83EQ2M2I3 478 aa2.09□□□□□ -2.07
PTPRC-205ENST00000391970 HES5Q5TA89 166 aa2.09□□□□□ -2.07
PTPRC-205ENST00000391970 DEGS2Q6QHC5 323 aa2.09□□□□□ -2.07
PTPRC-205ENST00000391970 C5orf46Q6UWT4 87 aa2.09□□□□□ -2.07
PTPRC-205ENST00000391970 ZNF767PQ75MW2 155 aa2.09□□□□□ -2.07
PTPRC-205ENST00000391970 COX15Q7KZN9 410 aa2.09□□□□□ -2.07
PTPRC-205ENST00000391970 COPS6Q7L5N1 327 aa2.09□□□□□ -2.07
PTPRC-205ENST00000391970 CTAGE6Q86UF2 777 aa2.09□□□□□ -2.07
PTPRC-205ENST00000391970 TTC5Q8N0Z6 440 aa2.09□□□□□ -2.07
PTPRC-205ENST00000391970 MMGT1Q8N4V1 131 aa2.09□□□□□ -2.07
PTPRC-205ENST00000391970 FAM71E2Q8N5Q1 922 aa2.09□□□□□ -2.07
PTPRC-205ENST00000391970 ASCC1Q8N9N2 400 aaKnown RBP2.09□□□□□ -2.07
PTPRC-205ENST00000391970 VN1R2Q8NFZ6 395 aa2.09□□□□□ -2.07
PTPRC-205ENST00000391970 OR8J2Q8NGG1 315 aa2.09□□□□□ -2.07
PTPRC-205ENST00000391970 OR6X1Q8NH79 312 aa2.09□□□□□ -2.07
PTPRC-205ENST00000391970 KCNG3Q8TAE7 436 aa2.09□□□□□ -2.07
PTPRC-205ENST00000391970 BLOC1S5Q8TDH9 187 aa2.09□□□□□ -2.07
PTPRC-205ENST00000391970 PYDC1Q8WXC3 89 aa2.09□□□□□ -2.07
PTPRC-205ENST00000391970 NDRG1Q92597 394 aaKnown RBP2.09□□□□□ -2.07
PTPRC-205ENST00000391970 TNFRSF14Q92956 283 aa2.09□□□□□ -2.07
PTPRC-205ENST00000391970 RASD2Q96D21 266 aa2.09□□□□□ -2.07
PTPRC-205ENST00000391970 C9orf72Q96LT7 481 aa2.09□□□□□ -2.07
PTPRC-205ENST00000391970 CSPG4P5Q96PW8 444 aa2.09□□□□□ -2.07
PTPRC-205ENST00000391970 MRPS26Q9BYN8 205 aaKnown RBP2.09□□□□□ -2.07
PTPRC-205ENST00000391970 HDHD2Q9H0R4 259 aa2.09□□□□□ -2.07
PTPRC-205ENST00000391970 DNTTIP1Q9H147 329 aa2.09□□□□□ -2.07
PTPRC-205ENST00000391970 OR52A5Q9H2C5 316 aa2.09□□□□□ -2.07
PTPRC-205ENST00000391970 GOLPH3Q9H4A6 298 aa2.09□□□□□ -2.07
PTPRC-205ENST00000391970 SYNDIG1Q9H7V2 258 aa2.09□□□□□ -2.07
PTPRC-205ENST00000391970 MRPL47Q9HD33 250 aaKnown RBP2.09□□□□□ -2.07
PTPRC-205ENST00000391970 MED9Q9NWA0 146 aa2.09□□□□□ -2.07
PTPRC-205ENST00000391970 CMTM6Q9NX76 183 aa2.09□□□□□ -2.07
PTPRC-205ENST00000391970 SLC2A8Q9NY64 477 aa2.09□□□□□ -2.07
PTPRC-205ENST00000391970 XCL2Q9UBD3 114 aa2.09□□□□□ -2.07
PTPRC-205ENST00000391970 GLS2Q9UI32 602 aa2.09□□□□□ -2.07
PTPRC-205ENST00000391970 ZNF225Q9UK10 706 aa2.09□□□□□ -2.07
PTPRC-205ENST00000391970 RAB23Q9ULC3 237 aa2.09□□□□□ -2.07
PTPRC-205ENST00000391970 CSDC2Q9Y534 153 aaKnown RBP2.09□□□□□ -2.07
PTPRC-205ENST00000391970 PUS1Q9Y606 427 aaKnown RBP eCLIP2.09□□□□□ -2.07
PTPRC-205ENST00000391970 KIF13BQ9NQT8 1826 aa2.09□□□□□ -2.08
PTPRC-205ENST00000391970 MAP3K4Q9Y6R4 1608 aa2.09□□□□□ -2.08
PTPRC-205ENST00000391970 RLFQ13129 1914 aa2.09□□□□□ -2.08
PTPRC-205ENST00000391970 MTCL1Q9Y4B5 1905 aaKnown RBP2.09□□□□□ -2.08
PTPRC-205ENST00000391970 MYH4Q9Y623 1939 aa2.09□□□□□ -2.08
PTPRC-205ENST00000391970 ADAMTSL3P82987 1691 aa2.09□□□□□ -2.08
PTPRC-205ENST00000391970 PLCH1Q4KWH8 1693 aa2.09□□□□□ -2.08
PTPRC-205ENST00000391970 TDRD6O60522 2096 aaKnown RBP2.08□□□□□ -2.08
PTPRC-205ENST00000391970 MYO5BQ9ULV0 1848 aa2.08□□□□□ -2.08
PTPRC-205ENST00000391970 TRPM2O94759 1503 aa2.08□□□□□ -2.08
PTPRC-205ENST00000391970 TANC1Q9C0D5 1861 aa2.08□□□□□ -2.08
PTPRC-205ENST00000391970 FRMPD1Q5SYB0 1578 aa2.08□□□□□ -2.08
PTPRC-205ENST00000391970 SAMD9LQ8IVG5 1584 aa2.08□□□□□ -2.08
PTPRC-205ENST00000391970 DIP2BQ9P265 1576 aa2.08□□□□□ -2.08
PTPRC-205ENST00000391970 A0A0G2JN53 185 aa2.08□□□□□ -2.08
PTPRC-205ENST00000391970 A0A0J9YYE9 177 aa2.08□□□□□ -2.08
PTPRC-205ENST00000391970 LOC100506127A0A0U1RQW1 187 aa2.08□□□□□ -2.08
PTPRC-205ENST00000391970 ISPDA4D126 451 aa2.08□□□□□ -2.08
PTPRC-205ENST00000391970 PINLYPA6NC86 204 aa2.08□□□□□ -2.08
PTPRC-205ENST00000391970 NCF1BA6NI72 391 aaPredicted RBP2.08□□□□□ -2.08
PTPRC-205ENST00000391970 OR6C70A6NIJ9 312 aa2.08□□□□□ -2.08
PTPRC-205ENST00000391970 NCF1CA8MVU1 366 aaPredicted RBP2.08□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms