RNA–Protein interactions for RNA: ENST00000384706.1

SNORD28-201, Transcript of small nucleolar RNA, C/D box 28, humanhuman

BASIC

Gene SNORD28, Length 75 nt, Biotype snoRNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD28-201ENST00000384706 ARGLU1Q9NWB6 273 aaPredicted RBP-0.12□□□□□ -2.43
SNORD28-201ENST00000384706 CLN8Q9UBY8 286 aa-0.12□□□□□ -2.43
SNORD28-201ENST00000384706 SH3BGRL2Q9UJC5 107 aa-0.12□□□□□ -2.43
SNORD28-201ENST00000384706 RAB22AQ9UL26 194 aa-0.12□□□□□ -2.43
SNORD28-201ENST00000384706 ING4Q9UNL4 249 aa-0.12□□□□□ -2.43
SNORD28-201ENST00000384706 SLC7A11Q9UPY5 501 aa-0.12□□□□□ -2.43
SNORD28-201ENST00000384706 CCL26Q9Y258 94 aa-0.12□□□□□ -2.43
SNORD28-201ENST00000384706 CAB39Q9Y376 341 aaPredicted RBP-0.12□□□□□ -2.43
SNORD28-201ENST00000384706 GOLT1BQ9Y3E0 138 aa-0.12□□□□□ -2.43
SNORD28-201ENST00000384706 SOX21Q9Y651 276 aaPredicted RBP-0.12□□□□□ -2.43
SNORD28-201ENST00000384706 KCNE3Q9Y6H6 103 aa-0.12□□□□□ -2.43
SNORD28-201ENST00000384706 ICOSQ9Y6W8 199 aa-0.12□□□□□ -2.43
SNORD28-201ENST00000384706 U3KQK5 164 aa-0.12□□□□□ -2.43
SNORD28-201ENST00000384706 CNTNAP1P78357 1384 aa-0.12□□□□□ -2.43
SNORD28-201ENST00000384706 ATP10AO60312 1499 aa-0.12□□□□□ -2.43
SNORD28-201ENST00000384706 LAMB4A4D0S4 1761 aa-0.12□□□□□ -2.43
SNORD28-201ENST00000384706 NYNRINQ9P2P1 1898 aaKnown RBP-0.12□□□□□ -2.43
SNORD28-201ENST00000384706 SYNE2Q8WXH0 6885 aaKnown RBP-0.12□□□□□ -2.43
SNORD28-201ENST00000384706 SPAG9O60271 1321 aaKnown RBP-0.13□□□□□ -2.43
SNORD28-201ENST00000384706 NCKAP5O14513 1909 aa-0.13□□□□□ -2.43
SNORD28-201ENST00000384706 DMBT1Q9UGM3 2413 aaPredicted RBP-0.13□□□□□ -2.43
SNORD28-201ENST00000384706 PXDNLA1KZ92 1463 aa-0.13□□□□□ -2.43
SNORD28-201ENST00000384706 IGKV1-27A0A075B6S5 117 aa-0.13□□□□□ -2.43
SNORD28-201ENST00000384706 IGKV2-40A0A087WW87 121 aaPredicted RBP-0.13□□□□□ -2.43
SNORD28-201ENST00000384706 A0A087WZY1 265 aa-0.13□□□□□ -2.43
SNORD28-201ENST00000384706 IGKV2D-26A0A0A0MRZ7 120 aa-0.13□□□□□ -2.43
SNORD28-201ENST00000384706 A0A0B4J2C4 111 aa-0.13□□□□□ -2.43
SNORD28-201ENST00000384706 IGKV1-6A0A0C4DH72 117 aa-0.13□□□□□ -2.43
SNORD28-201ENST00000384706 GLYATL1P3A0A0U1RQE8 302 aa-0.13□□□□□ -2.43
SNORD28-201ENST00000384706 A0A1B0GU33 70 aa-0.13□□□□□ -2.43
SNORD28-201ENST00000384706 A0A1W2PQL4 384 aaPredicted RBP-0.13□□□□□ -2.43
SNORD28-201ENST00000384706 METTL21EPA6NDL7 271 aa-0.13□□□□□ -2.43
SNORD28-201ENST00000384706 KNCNA6PVL3 124 aa-0.13□□□□□ -2.43
SNORD28-201ENST00000384706 LRRIQ3A6PVS8 624 aaPredicted RBP-0.13□□□□□ -2.43
SNORD28-201ENST00000384706 FNDC10F2Z333 226 aa-0.13□□□□□ -2.43
SNORD28-201ENST00000384706 GOLGA8SH3BPF8 625 aa-0.13□□□□□ -2.43
SNORD28-201ENST00000384706 TAAR5O14804 337 aa-0.13□□□□□ -2.43
SNORD28-201ENST00000384706 FFAR1O14842 300 aa-0.13□□□□□ -2.43
SNORD28-201ENST00000384706 MAPK13O15264 365 aa-0.13□□□□□ -2.43
SNORD28-201ENST00000384706 CDH16O75309 829 aa-0.13□□□□□ -2.43
SNORD28-201ENST00000384706 FARS2O95363 451 aaKnown RBP-0.13□□□□□ -2.43
SNORD28-201ENST00000384706 C1orf105O95561 183 aa-0.13□□□□□ -2.43
SNORD28-201ENST00000384706 OXTP01178 125 aa-0.13□□□□□ -2.43
SNORD28-201ENST00000384706 IGKV2D-40P01614 121 aaPredicted RBP-0.13□□□□□ -2.43
SNORD28-201ENST00000384706 NCK1P16333 377 aa-0.13□□□□□ -2.43
SNORD28-201ENST00000384706 U2AF2P26368 475 aaKnown RBP eCLIP-0.13□□□□□ -2.43
SNORD28-201ENST00000384706 CA8P35219 290 aa-0.13□□□□□ -2.43
SNORD28-201ENST00000384706 CHI3L1P36222 383 aaPredicted RBP-0.13□□□□□ -2.43
SNORD28-201ENST00000384706 GPX4P36969 197 aaPredicted RBP-0.13□□□□□ -2.43
SNORD28-201ENST00000384706 VHLP40337 213 aa-0.13□□□□□ -2.43
SNORD28-201ENST00000384706 GRIA1P42261 906 aa-0.13□□□□□ -2.43
SNORD28-201ENST00000384706 SLC1A2P43004 574 aa-0.13□□□□□ -2.43
SNORD28-201ENST00000384706 RABIFP47224 123 aa-0.13□□□□□ -2.43
SNORD28-201ENST00000384706 GPX6P59796 221 aa-0.13□□□□□ -2.43
SNORD28-201ENST00000384706 GMFBP60983 142 aa-0.13□□□□□ -2.43
SNORD28-201ENST00000384706 PSG4Q00888 419 aa-0.13□□□□□ -2.43
SNORD28-201ENST00000384706 SLC25A11Q02978 314 aaKnown RBP-0.13□□□□□ -2.43
SNORD28-201ENST00000384706 PLCXD2Q0VAA5 305 aa-0.13□□□□□ -2.43
SNORD28-201ENST00000384706 MERTKQ12866 999 aa-0.13□□□□□ -2.43
SNORD28-201ENST00000384706 CHIT1Q13231 466 aa-0.13□□□□□ -2.43
SNORD28-201ENST00000384706 CASP8Q14790 479 aa-0.13□□□□□ -2.43
SNORD28-201ENST00000384706 TMEM41BQ5BJD5 291 aa-0.13□□□□□ -2.43
SNORD28-201ENST00000384706 PDZK1Q5T2W1 519 aa-0.13□□□□□ -2.43
SNORD28-201ENST00000384706 OR4F3Q6IEY1 312 aa-0.13□□□□□ -2.43
SNORD28-201ENST00000384706 ANKRD26P1Q6NSI1 321 aa-0.13□□□□□ -2.43
SNORD28-201ENST00000384706 C16orf87Q6PH81 154 aa-0.13□□□□□ -2.43
SNORD28-201ENST00000384706 CD300LGQ6UXG3 332 aa-0.13□□□□□ -2.43
SNORD28-201ENST00000384706 LRRC74BQ6ZQY2 392 aa-0.13□□□□□ -2.43
SNORD28-201ENST00000384706 CCDC73Q6ZRK6 1079 aa-0.13□□□□□ -2.43
SNORD28-201ENST00000384706 Q6ZRU5 148 aa-0.13□□□□□ -2.43
SNORD28-201ENST00000384706 Q6ZSR6 202 aa-0.13□□□□□ -2.43
SNORD28-201ENST00000384706 MRPL55Q7Z7F7 128 aaKnown RBP-0.13□□□□□ -2.43
SNORD28-201ENST00000384706 TGIF2LXQ8IUE1 241 aa-0.13□□□□□ -2.43
SNORD28-201ENST00000384706 LRRC8AQ8IWT6 810 aa-0.13□□□□□ -2.43
SNORD28-201ENST00000384706 PDIK1LQ8N165 341 aa-0.13□□□□□ -2.43
SNORD28-201ENST00000384706 MUC15Q8N387 334 aa-0.13□□□□□ -2.43
SNORD28-201ENST00000384706 C10orf126Q8N4M7 172 aa-0.13□□□□□ -2.43
SNORD28-201ENST00000384706 NPWQ8N729 165 aa-0.13□□□□□ -2.43
SNORD28-201ENST00000384706 ZFP62Q8NB50 900 aaPredicted RBP-0.13□□□□□ -2.43
SNORD28-201ENST00000384706 CHST4Q8NCG5 386 aa-0.13□□□□□ -2.43
SNORD28-201ENST00000384706 OR5C1Q8NGR4 320 aa-0.13□□□□□ -2.43
SNORD28-201ENST00000384706 OR2V1Q8NHB1 315 aa-0.13□□□□□ -2.43
SNORD28-201ENST00000384706 LMX1AQ8TE12 382 aa-0.13□□□□□ -2.43
SNORD28-201ENST00000384706 SCFD1Q8WVM8 642 aa-0.13□□□□□ -2.43
SNORD28-201ENST00000384706 ITLN2Q8WWU7 325 aaPredicted RBP-0.13□□□□□ -2.43
SNORD28-201ENST00000384706 RERGQ96A58 199 aaPredicted RBP-0.13□□□□□ -2.43
SNORD28-201ENST00000384706 RAD51AP1Q96B01 352 aa-0.13□□□□□ -2.43
SNORD28-201ENST00000384706 FXYD5Q96DB9 178 aa-0.13□□□□□ -2.43
SNORD28-201ENST00000384706 MRPL38Q96DV4 380 aaKnown RBP-0.13□□□□□ -2.43
SNORD28-201ENST00000384706 PLEKHA8Q96JA3 519 aa-0.13□□□□□ -2.43
SNORD28-201ENST00000384706 DNAJC30Q96LL9 226 aa-0.13□□□□□ -2.43
SNORD28-201ENST00000384706 FAM111AQ96PZ2 611 aa-0.13□□□□□ -2.43
SNORD28-201ENST00000384706 OR4K3Q96R72 315 aa-0.13□□□□□ -2.43
SNORD28-201ENST00000384706 OR8B2Q96RD0 313 aa-0.13□□□□□ -2.43
SNORD28-201ENST00000384706 OR52B2Q96RD2 323 aa-0.13□□□□□ -2.43
SNORD28-201ENST00000384706 FMO2Q99518 471 aa-0.13□□□□□ -2.43
SNORD28-201ENST00000384706 SMR3AQ99954 134 aa-0.13□□□□□ -2.43
SNORD28-201ENST00000384706 KCNS3Q9BQ31 491 aa-0.13□□□□□ -2.43
SNORD28-201ENST00000384706 CWH43Q9H720 699 aa-0.13□□□□□ -2.43
SNORD28-201ENST00000384706 NIPAL2Q9H841 368 aa-0.13□□□□□ -2.43
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms