RNA–Protein interactions for RNA: ENST00000383801.6

SEC13-203, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2 BASIC

Gene SEC13, Length 1,479 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-203ENST00000383801 SSUH2Q9Y2M2 353 aa11.9□□□□□ -0.5
SEC13-203ENST00000383801 RBMX2Q9Y388 322 aaKnown RBP11.9□□□□□ -0.5
SEC13-203ENST00000383801 METTL21EPA6NDL7 271 aa11.89□□□□□ -0.51
SEC13-203ENST00000383801 F5H5K5 113 aa11.89□□□□□ -0.51
SEC13-203ENST00000383801 LDLRAD4O15165 306 aa11.89□□□□□ -0.51
SEC13-203ENST00000383801 DOK2O60496 412 aa11.89□□□□□ -0.51
SEC13-203ENST00000383801 CNOT4O95628 575 aaKnown RBP11.89□□□□□ -0.51
SEC13-203ENST00000383801 BPNT1O95861 308 aa11.89□□□□□ -0.51
SEC13-203ENST00000383801 FAM157BP0CG42 384 aa11.89□□□□□ -0.51
SEC13-203ENST00000383801 SLC6A1P30531 599 aa11.89□□□□□ -0.51
SEC13-203ENST00000383801 PTH2RP49190 550 aa11.89□□□□□ -0.51
SEC13-203ENST00000383801 CLDN12P56749 244 aa11.89□□□□□ -0.51
SEC13-203ENST00000383801 RPUSD3Q6P087 351 aaKnown RBP11.89□□□□□ -0.51
SEC13-203ENST00000383801 ZC3HAV1Q7Z2W4 902 aaKnown RBP11.89□□□□□ -0.51
SEC13-203ENST00000383801 ADGRE4PQ86SQ3 457 aa11.89□□□□□ -0.51
SEC13-203ENST00000383801 SARAFQ96BY9 339 aa11.89□□□□□ -0.51
SEC13-203ENST00000383801 ADAT3Q96EY9 351 aaPredicted RBP11.89□□□□□ -0.51
SEC13-203ENST00000383801 GMPPAQ96IJ6 420 aaPredicted RBP11.89□□□□□ -0.51
SEC13-203ENST00000383801 ZFP3Q96NJ6 502 aa11.89□□□□□ -0.51
SEC13-203ENST00000383801 ALKBH3Q96Q83 286 aaPredicted RBP11.89□□□□□ -0.51
SEC13-203ENST00000383801 MARVELD1Q9BSK0 173 aa11.89□□□□□ -0.51
SEC13-203ENST00000383801 OR2H1Q9GZK4 316 aa11.89□□□□□ -0.51
SEC13-203ENST00000383801 RNF121Q9H920 327 aa11.89□□□□□ -0.51
SEC13-203ENST00000383801 PLSCR2Q9NRY7 297 aa11.89□□□□□ -0.51
SEC13-203ENST00000383801 ETAA1Q9NY74 926 aa11.89□□□□□ -0.51
SEC13-203ENST00000383801 RAB22AQ9UL26 194 aa11.89□□□□□ -0.51
SEC13-203ENST00000383801 MRPS7Q9Y2R9 242 aaKnown RBP11.89□□□□□ -0.51
SEC13-203ENST00000383801 CACNG2Q9Y698 323 aa11.89□□□□□ -0.51
SEC13-203ENST00000383801 SLC22A20A6NK97 555 aa11.89□□□□□ -0.51
SEC13-203ENST00000383801 EEF1E1O43324 174 aaKnown RBP11.89□□□□□ -0.51
SEC13-203ENST00000383801 CTAG2O75638 210 aa11.89□□□□□ -0.51
SEC13-203ENST00000383801 HNRNPCP07910 306 aaKnown RBP eCLIP11.89□□□□□ -0.51
SEC13-203ENST00000383801 MMP7P09237 267 aaPredicted RBP11.89□□□□□ -0.51
SEC13-203ENST00000383801 UBBP0CG47 229 aa11.89□□□□□ -0.51
SEC13-203ENST00000383801 SPNP16150 400 aa11.89□□□□□ -0.51
SEC13-203ENST00000383801 ZNF32P17041 273 aa11.89□□□□□ -0.51
SEC13-203ENST00000383801 CDK2P24941 298 aa11.89□□□□□ -0.51
SEC13-203ENST00000383801 ARR3P36575 388 aa11.89□□□□□ -0.51
SEC13-203ENST00000383801 KIR2DL3P43628 341 aa11.89□□□□□ -0.51
SEC13-203ENST00000383801 SLC6A9P48067 706 aa11.89□□□□□ -0.51
SEC13-203ENST00000383801 RAG2P55895 527 aa11.89□□□□□ -0.51
SEC13-203ENST00000383801 PSG4Q00888 419 aa11.89□□□□□ -0.51
SEC13-203ENST00000383801 RNFT1Q5M7Z0 435 aa11.89□□□□□ -0.51
SEC13-203ENST00000383801 AGAP6Q5VW22 663 aa11.89□□□□□ -0.51
SEC13-203ENST00000383801 CCDC36Q8IYA8 594 aa11.89□□□□□ -0.51
SEC13-203ENST00000383801 ZNF100Q8IYN0 542 aa11.89□□□□□ -0.51
SEC13-203ENST00000383801 CREB3L1Q96BA8 519 aa11.89□□□□□ -0.51
SEC13-203ENST00000383801 CPNE2Q96FN4 548 aaPredicted RBP11.89□□□□□ -0.51
SEC13-203ENST00000383801 SLC7A10Q9NS82 523 aa11.89□□□□□ -0.51
SEC13-203ENST00000383801 ZNF319Q9P2F9 582 aa11.89□□□□□ -0.51
SEC13-203ENST00000383801 DCDC2BA2VCK2 349 aa11.88□□□□□ -0.51
SEC13-203ENST00000383801 OR14I1A6ND48 311 aa11.88□□□□□ -0.51
SEC13-203ENST00000383801 GGT3PA6NGU5 568 aa11.88□□□□□ -0.51
SEC13-203ENST00000383801 AHRRA9YTQ3 701 aa11.88□□□□□ -0.51
SEC13-203ENST00000383801 PRF1P14222 555 aa11.88□□□□□ -0.51
SEC13-203ENST00000383801 B4GALT1P15291 398 aa11.88□□□□□ -0.51
SEC13-203ENST00000383801 ZNF93P35789 620 aaPredicted RBP11.88□□□□□ -0.51
SEC13-203ENST00000383801 ALDH3B1P43353 468 aa11.88□□□□□ -0.51
SEC13-203ENST00000383801 TAS2R20P59543 309 aa11.88□□□□□ -0.51
SEC13-203ENST00000383801 BTG1P62324 171 aa11.88□□□□□ -0.51
SEC13-203ENST00000383801 SPOCK1Q08629 439 aa11.88□□□□□ -0.51
SEC13-203ENST00000383801 SRSF6Q13247 344 aaKnown RBP11.88□□□□□ -0.51
SEC13-203ENST00000383801 ZNF169Q14929 603 aaPredicted RBP11.88□□□□□ -0.51
SEC13-203ENST00000383801 OR2W3Q7Z3T1 314 aa11.88□□□□□ -0.51
SEC13-203ENST00000383801 COMMD2Q86X83 199 aa11.88□□□□□ -0.51
SEC13-203ENST00000383801 SKA3Q8IX90 412 aa11.88□□□□□ -0.51
SEC13-203ENST00000383801 JAGN1Q8N5M9 183 aa11.88□□□□□ -0.51
SEC13-203ENST00000383801 OR51A2Q8NGJ7 313 aa11.88□□□□□ -0.51
SEC13-203ENST00000383801 ACTR6Q9GZN1 396 aa11.88□□□□□ -0.51
SEC13-203ENST00000383801 CALHM2Q9HA72 323 aa11.88□□□□□ -0.51
SEC13-203ENST00000383801 SCPEP1Q9HB40 452 aa11.88□□□□□ -0.51
SEC13-203ENST00000383801 SPRR3Q9UBC9 169 aa11.88□□□□□ -0.51
SEC13-203ENST00000383801 ZNF107Q9UII5 783 aaPredicted RBP11.88□□□□□ -0.51
SEC13-203ENST00000383801 CLEC4AQ9UMR7 237 aa11.88□□□□□ -0.51
SEC13-203ENST00000383801 LIPGQ9Y5X9 500 aa11.88□□□□□ -0.51
SEC13-203ENST00000383801 TMEM272A0A1B0GTI8 110 aa11.87□□□□□ -0.51
SEC13-203ENST00000383801 H3BSH0 61 aa11.87□□□□□ -0.51
SEC13-203ENST00000383801 EFSO43281 561 aa11.87□□□□□ -0.51
SEC13-203ENST00000383801 XRCC2O43543 280 aa11.87□□□□□ -0.51
SEC13-203ENST00000383801 ORC5O43913 435 aa11.87□□□□□ -0.51
SEC13-203ENST00000383801 SS18L1O75177 396 aaPredicted RBP11.87□□□□□ -0.51
SEC13-203ENST00000383801 HOXB1P14653 301 aaPredicted RBP11.87□□□□□ -0.51
SEC13-203ENST00000383801 HLA-DMAP28067 261 aa11.87□□□□□ -0.51
SEC13-203ENST00000383801 MPGP29372 298 aa11.87□□□□□ -0.51
SEC13-203ENST00000383801 SNTB2Q13425 540 aaKnown RBP11.87□□□□□ -0.51
SEC13-203ENST00000383801 GPR176Q14439 515 aa11.87□□□□□ -0.51
SEC13-203ENST00000383801 ZBTB37Q5TC79 503 aa11.87□□□□□ -0.51
SEC13-203ENST00000383801 FBXW9Q5XUX1 488 aa11.87□□□□□ -0.51
SEC13-203ENST00000383801 SNIP1Q8TAD8 396 aaKnown RBP11.87□□□□□ -0.51
SEC13-203ENST00000383801 SSC4DQ8WTU2 575 aa11.87□□□□□ -0.51
SEC13-203ENST00000383801 TECTBQ96PL2 329 aa11.87□□□□□ -0.51
SEC13-203ENST00000383801 NEDD4LQ96PU5 975 aa11.87□□□□□ -0.51
SEC13-203ENST00000383801 WNT5BQ9H1J7 359 aa11.87□□□□□ -0.51
SEC13-203ENST00000383801 DPAGT1Q9H3H5 408 aa11.87□□□□□ -0.51
SEC13-203ENST00000383801 RHBDD3Q9Y3P4 386 aa11.87□□□□□ -0.51
SEC13-203ENST00000383801 ZNF292O60281 2723 aa11.87□□□□□ -0.51
SEC13-203ENST00000383801 CIB4A0PJX0 185 aa11.86□□□□□ -0.51
SEC13-203ENST00000383801 MEIOCA2RUB1 952 aa11.86□□□□□ -0.51
SEC13-203ENST00000383801 A6NIN4 97 aa11.86□□□□□ -0.51
SEC13-203ENST00000383801 KLK10O43240 276 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms