RNA–Protein interactions for RNA: ENST00000382723.4

MSX1-201, Transcript of msh homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSX1, Length 1,939 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSX1-201ENST00000382723 CEP78Q5JTW2 689 aa23.3■■□□□ 1.32
MSX1-201ENST00000382723 OR6Q1Q8NGQ2 317 aa23.3■■□□□ 1.32
MSX1-201ENST00000382723 OR1J2Q8NGS2 313 aa23.3■■□□□ 1.32
MSX1-201ENST00000382723 OR2AE1Q8NHA4 323 aa23.3■■□□□ 1.32
MSX1-201ENST00000382723 TAS2R4Q9NYW5 299 aa23.3■■□□□ 1.32
MSX1-201ENST00000382723 OSGIN2Q9Y236 505 aa23.3■■□□□ 1.32
MSX1-201ENST00000382723 A3GALT2U3KPV4 340 aa23.3■■□□□ 1.32
MSX1-201ENST00000382723 A0A0G2JK05 382 aa23.29■■□□□ 1.32
MSX1-201ENST00000382723 MSTNO14793 375 aa23.29■■□□□ 1.32
MSX1-201ENST00000382723 SLC25A35Q3KQZ1 300 aa23.29■■□□□ 1.32
MSX1-201ENST00000382723 IDNKQ5T6J7 187 aa23.29■■□□□ 1.32
MSX1-201ENST00000382723 ASPHD2Q6ICH7 369 aa23.29■■□□□ 1.32
MSX1-201ENST00000382723 SFXN4Q6P4A7 337 aa23.29■■□□□ 1.32
MSX1-201ENST00000382723 DOK3Q7L591 496 aa23.29■■□□□ 1.32
MSX1-201ENST00000382723 WDR31Q8NA23 367 aa23.29■■□□□ 1.32
MSX1-201ENST00000382723 SGK3Q96BR1 496 aa23.29■■□□□ 1.32
MSX1-201ENST00000382723 POM121L2Q96KW2 1035 aa23.29■■□□□ 1.32
MSX1-201ENST00000382723 CNTNAP3BQ96NU0 1288 aa23.29■■□□□ 1.32
MSX1-201ENST00000382723 VKORC1Q9BQB6 163 aa23.29■■□□□ 1.32
MSX1-201ENST00000382723 C1QTNF6Q9BXI9 259 aa23.29■■□□□ 1.32
MSX1-201ENST00000382723 CNTNAP3Q9BZ76 1288 aa23.29■■□□□ 1.32
MSX1-201ENST00000382723 SP140LQ9H930 580 aa23.29■■□□□ 1.32
MSX1-201ENST00000382723 SMURF1Q9HCE7 757 aa23.29■■□□□ 1.32
MSX1-201ENST00000382723 ZNF629Q9UEG4 869 aaPredicted RBP23.29■■□□□ 1.32
MSX1-201ENST00000382723 INTS1Q8N201 2190 aaKnown RBP23.29■■□□□ 1.32
MSX1-201ENST00000382723 TPRP12270 2363 aaKnown RBP23.29■■□□□ 1.32
MSX1-201ENST00000382723 ARPC4-TTLL3A0A0A6YYG9 625 aa23.29■■□□□ 1.32
MSX1-201ENST00000382723 CTDSP2O14595 271 aa23.29■■□□□ 1.32
MSX1-201ENST00000382723 PDCD5O14737 125 aa23.29■■□□□ 1.32
MSX1-201ENST00000382723 AGFG2O95081 481 aa23.29■■□□□ 1.32
MSX1-201ENST00000382723 CCL1P22362 96 aa23.29■■□□□ 1.32
MSX1-201ENST00000382723 ZNF75AQ96N20 296 aa23.29■■□□□ 1.32
MSX1-201ENST00000382723 SLC30A2Q9BRI3 323 aa23.29■■□□□ 1.32
MSX1-201ENST00000382723 PIGMQ9H3S5 423 aa23.29■■□□□ 1.32
MSX1-201ENST00000382723 CKLFQ9UBR5 152 aa23.29■■□□□ 1.32
MSX1-201ENST00000382723 DAPK2Q9UIK4 370 aa23.29■■□□□ 1.32
MSX1-201ENST00000382723 SERPINA5P05154 406 aa23.28■■□□□ 1.32
MSX1-201ENST00000382723 CELA3BP08861 270 aa23.28■■□□□ 1.32
MSX1-201ENST00000382723 HOXB1P14653 301 aaPredicted RBP23.28■■□□□ 1.32
MSX1-201ENST00000382723 IL32P24001 234 aa23.28■■□□□ 1.32
MSX1-201ENST00000382723 GNALP38405 381 aa23.28■■□□□ 1.32
MSX1-201ENST00000382723 LRRTM1Q86UE6 522 aa23.28■■□□□ 1.32
MSX1-201ENST00000382723 LIX1LQ8IVB5 337 aa23.28■■□□□ 1.32
MSX1-201ENST00000382723 SLC30A7Q8NEW0 376 aa23.28■■□□□ 1.32
MSX1-201ENST00000382723 AP3S1Q92572 193 aa23.28■■□□□ 1.32
MSX1-201ENST00000382723 RND1Q92730 232 aa23.28■■□□□ 1.32
MSX1-201ENST00000382723 ADAT3Q96EY9 351 aaPredicted RBP23.28■■□□□ 1.32
MSX1-201ENST00000382723 BOD1Q96IK1 185 aa23.28■■□□□ 1.32
MSX1-201ENST00000382723 DMRTA2Q96SC8 542 aa23.28■■□□□ 1.32
MSX1-201ENST00000382723 GFI1Q99684 422 aa23.28■■□□□ 1.32
MSX1-201ENST00000382723 MEMO1Q9Y316 297 aa23.28■■□□□ 1.32
MSX1-201ENST00000382723 A0A075B6Q4 140 aa23.27■■□□□ 1.32
MSX1-201ENST00000382723 A8MXE2 369 aa23.27■■□□□ 1.32
MSX1-201ENST00000382723 RGS5O15539 181 aa23.27■■□□□ 1.32
MSX1-201ENST00000382723 IGLV3-1P01715 115 aa23.27■■□□□ 1.32
MSX1-201ENST00000382723 ADRA2CP18825 462 aa23.27■■□□□ 1.32
MSX1-201ENST00000382723 CA7P43166 264 aa23.27■■□□□ 1.32
MSX1-201ENST00000382723 IDH3GP51553 393 aaPredicted RBP23.27■■□□□ 1.32
MSX1-201ENST00000382723 GLYATL3Q5SZD4 288 aa23.27■■□□□ 1.32
MSX1-201ENST00000382723 DNAAF1Q8NEP3 725 aa23.27■■□□□ 1.32
MSX1-201ENST00000382723 REEP6Q96HR9 211 aa23.27■■□□□ 1.32
MSX1-201ENST00000382723 C1QTNF5Q9BXJ0 243 aa23.27■■□□□ 1.32
MSX1-201ENST00000382723 CRNNQ9UBG3 495 aaPredicted RBP23.27■■□□□ 1.32
MSX1-201ENST00000382723 SLC2A2P11168 524 aaPredicted RBP23.27■■□□□ 1.32
MSX1-201ENST00000382723 ZNF20P17024 532 aa23.27■■□□□ 1.32
MSX1-201ENST00000382723 TMEM211Q6ICI0 200 aa23.27■■□□□ 1.32
MSX1-201ENST00000382723 MYPOPQ86VE0 399 aaPredicted RBP23.27■■□□□ 1.32
MSX1-201ENST00000382723 C17orf78Q8N4C9 275 aa23.27■■□□□ 1.32
MSX1-201ENST00000382723 PLEKHA1Q9HB21 404 aa23.27■■□□□ 1.32
MSX1-201ENST00000382723 NOTOA8MTQ0 251 aa23.26■■□□□ 1.31
MSX1-201ENST00000382723 ZNF14P17017 642 aaPredicted RBP23.26■■□□□ 1.31
MSX1-201ENST00000382723 S100A5P33763 92 aa23.26■■□□□ 1.31
MSX1-201ENST00000382723 PAQR4Q8N4S7 273 aaPredicted RBP23.26■■□□□ 1.31
MSX1-201ENST00000382723 OR14K1Q8NGZ2 314 aa23.26■■□□□ 1.31
MSX1-201ENST00000382723 WBP1Q96G27 269 aa23.26■■□□□ 1.31
MSX1-201ENST00000382723 COMMD3Q9UBI1 195 aa23.26■■□□□ 1.31
MSX1-201ENST00000382723 OR5H1A6NKK0 313 aa23.25■■□□□ 1.31
MSX1-201ENST00000382723 ANXA2P2A6NMY6 339 aa23.25■■□□□ 1.31
MSX1-201ENST00000382723 EPXP11678 715 aa23.25■■□□□ 1.31
MSX1-201ENST00000382723 PRSS12P56730 875 aa23.25■■□□□ 1.31
MSX1-201ENST00000382723 MRPL49Q13405 166 aaKnown RBP23.25■■□□□ 1.31
MSX1-201ENST00000382723 MOGQ16653 247 aa23.25■■□□□ 1.31
MSX1-201ENST00000382723 ST3GAL2Q16842 350 aa23.25■■□□□ 1.31
MSX1-201ENST00000382723 SERPINA12Q8IW75 414 aa23.25■■□□□ 1.31
MSX1-201ENST00000382723 FOXJ3Q9UPW0 622 aa23.25■■□□□ 1.31
MSX1-201ENST00000382723 PEX16Q9Y5Y5 336 aa23.25■■□□□ 1.31
MSX1-201ENST00000382723 IGFBP3P17936 291 aaPredicted RBP23.25■■□□□ 1.31
MSX1-201ENST00000382723 MRGPRGQ86SM5 289 aa23.25■■□□□ 1.31
MSX1-201ENST00000382723 CROCCP3Q8IVE0 287 aa23.25■■□□□ 1.31
MSX1-201ENST00000382723 PARP16Q8N5Y8 322 aa23.25■■□□□ 1.31
MSX1-201ENST00000382723 PLPP7Q8NBV4 271 aa23.25■■□□□ 1.31
MSX1-201ENST00000382723 RELL2Q8NC24 303 aaPredicted RBP23.25■■□□□ 1.31
MSX1-201ENST00000382723 OR51A2Q8NGJ7 313 aa23.25■■□□□ 1.31
MSX1-201ENST00000382723 S100PBPQ96BU1 408 aa23.25■■□□□ 1.31
MSX1-201ENST00000382723 V9GY05 133 aa23.25■■□□□ 1.31
MSX1-201ENST00000382723 DHRS3O75911 302 aa23.24■■□□□ 1.31
MSX1-201ENST00000382723 CBR1P16152 277 aa23.24■■□□□ 1.31
MSX1-201ENST00000382723 ZNF12P17014 697 aa23.24■■□□□ 1.31
MSX1-201ENST00000382723 FSTP19883 344 aa23.24■■□□□ 1.31
MSX1-201ENST00000382723 FAM27E3Q08E93 113 aa23.24■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms