RNA–Protein interactions for RNA: ENST00000381513.8

SMARCD1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 1 (best) BASIC

Gene SMARCD1, Length 3,237 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-201ENST00000381513 FLT3LGP49771 235 aa17.01■□□□□ 0.31
SMARCD1-201ENST00000381513 DLK1P80370 383 aa17.01■□□□□ 0.31
SMARCD1-201ENST00000381513 JOSD1Q15040 202 aaPredicted RBP17.01■□□□□ 0.31
SMARCD1-201ENST00000381513 OPN5Q6U736 354 aa17.01■□□□□ 0.31
SMARCD1-201ENST00000381513 MED25Q71SY5 747 aa17.01■□□□□ 0.31
SMARCD1-201ENST00000381513 AMZ2Q86W34 360 aa17.01■□□□□ 0.31
SMARCD1-201ENST00000381513 ZNF775Q96BV0 537 aaPredicted RBP17.01■□□□□ 0.31
SMARCD1-201ENST00000381513 MOGAT1Q96PD6 335 aa17.01■□□□□ 0.31
SMARCD1-201ENST00000381513 CYP8B1Q9UNU6 501 aa17.01■□□□□ 0.31
SMARCD1-201ENST00000381513 YIPF1Q9Y548 306 aa17.01■□□□□ 0.31
SMARCD1-201ENST00000381513 SFT2D2O95562 160 aa17■□□□□ 0.31
SMARCD1-201ENST00000381513 KNG1P01042 644 aa17■□□□□ 0.31
SMARCD1-201ENST00000381513 ZAR1Q86SH2 424 aa17■□□□□ 0.31
SMARCD1-201ENST00000381513 EXD3Q8N9H8 876 aa17■□□□□ 0.31
SMARCD1-201ENST00000381513 BEND2Q8NDZ0 799 aa17■□□□□ 0.31
SMARCD1-201ENST00000381513 YPEL4Q96NS1 127 aa17■□□□□ 0.31
SMARCD1-201ENST00000381513 AMELYQ99218 206 aa17■□□□□ 0.31
SMARCD1-201ENST00000381513 COL4A3Q01955 1670 aa17■□□□□ 0.31
SMARCD1-201ENST00000381513 GON4LQ3T8J9 2241 aa17■□□□□ 0.31
SMARCD1-201ENST00000381513 SYT7O43581 403 aa17■□□□□ 0.31
SMARCD1-201ENST00000381513 MEP1BQ16820 701 aa17■□□□□ 0.31
SMARCD1-201ENST00000381513 TMEM184AQ6ZMB5 413 aa17■□□□□ 0.31
SMARCD1-201ENST00000381513 VWA8A3KMH1 1905 aa17■□□□□ 0.31
SMARCD1-201ENST00000381513 FCARP24071 287 aa17■□□□□ 0.31
SMARCD1-201ENST00000381513 CTXN1P60606 82 aa17■□□□□ 0.31
SMARCD1-201ENST00000381513 FAM3AP98173 230 aa17■□□□□ 0.31
SMARCD1-201ENST00000381513 Q6ZNB5 142 aa17■□□□□ 0.31
SMARCD1-201ENST00000381513 PLPP5Q8NEB5 264 aa17■□□□□ 0.31
SMARCD1-201ENST00000381513 ZCCHC10Q8TBK6 192 aa17■□□□□ 0.31
SMARCD1-201ENST00000381513 HHIPL1Q96JK4 782 aa17■□□□□ 0.31
SMARCD1-201ENST00000381513 FAM210BQ96KR6 192 aa17■□□□□ 0.31
SMARCD1-201ENST00000381513 DLEU1O43261 78 aa16.99■□□□□ 0.31
SMARCD1-201ENST00000381513 HNRNPKP61978 463 aaKnown RBP eCLIP16.99■□□□□ 0.311e-8■■■■□ 21.7
SMARCD1-201ENST00000381513 HAGHQ16775 308 aa16.99■□□□□ 0.31
SMARCD1-201ENST00000381513 ISXQ2M1V0 245 aa16.99■□□□□ 0.31
SMARCD1-201ENST00000381513 LINC01555Q8NAE3 123 aa16.99■□□□□ 0.31
SMARCD1-201ENST00000381513 C5orf66Q9H5L9 145 aa16.99■□□□□ 0.31
SMARCD1-201ENST00000381513 ZNF107Q9UII5 783 aaPredicted RBP16.99■□□□□ 0.31
SMARCD1-201ENST00000381513 RCL1Q9Y2P8 373 aaKnown RBP16.99■□□□□ 0.31
SMARCD1-201ENST00000381513 LOC101059915A0A1B0GWI6 518 aaPredicted RBP16.99■□□□□ 0.31
SMARCD1-201ENST00000381513 NTHL1P78549 312 aa16.99■□□□□ 0.31
SMARCD1-201ENST00000381513 LYPD6BQ8NI32 183 aa16.99■□□□□ 0.31
SMARCD1-201ENST00000381513 RSC1A1Q92681 617 aa16.99■□□□□ 0.31
SMARCD1-201ENST00000381513 ERGIC1Q969X5 290 aa16.99■□□□□ 0.31
SMARCD1-201ENST00000381513 NMNAT2Q9BZQ4 307 aa16.99■□□□□ 0.31
SMARCD1-201ENST00000381513 ZNF700Q9H0M5 742 aa16.99■□□□□ 0.31
SMARCD1-201ENST00000381513 BORCS7-ASMTA0A0B4J1R7 106 aa16.98■□□□□ 0.31
SMARCD1-201ENST00000381513 RPL36A-HNRNPH2H7BZ11 118 aa16.98■□□□□ 0.31
SMARCD1-201ENST00000381513 EMDP50402 254 aa16.98■□□□□ 0.31
SMARCD1-201ENST00000381513 PRDX1Q06830 199 aaKnown RBP16.98■□□□□ 0.31
SMARCD1-201ENST00000381513 MAP2K5Q13163 448 aa16.98■□□□□ 0.31
SMARCD1-201ENST00000381513 EXOSC7Q15024 291 aaKnown RBP16.98■□□□□ 0.31
SMARCD1-201ENST00000381513 TAF1CQ15572 869 aaPredicted RBP16.98■□□□□ 0.31
SMARCD1-201ENST00000381513 ITPRIPL2Q3MIP1 535 aa16.98■□□□□ 0.31
SMARCD1-201ENST00000381513 ZNF658BQ4V348 819 aaPredicted RBP16.98■□□□□ 0.31
SMARCD1-201ENST00000381513 DMRTA1Q5VZB9 504 aa16.98■□□□□ 0.31
SMARCD1-201ENST00000381513 ULK3Q6PHR2 472 aa16.98■□□□□ 0.31
SMARCD1-201ENST00000381513 KIRREL2Q6UWL6 708 aa16.98■□□□□ 0.31
SMARCD1-201ENST00000381513 TMEM182Q6ZP80 229 aaPredicted RBP16.98■□□□□ 0.31
SMARCD1-201ENST00000381513 SCRT1Q9BWW7 348 aa16.98■□□□□ 0.31
SMARCD1-201ENST00000381513 GPR87Q9BY21 358 aa16.98■□□□□ 0.31
SMARCD1-201ENST00000381513 TRIM2Q9C040 744 aa16.98■□□□□ 0.31
SMARCD1-201ENST00000381513 EPHX3Q9H6B9 360 aa16.98■□□□□ 0.31
SMARCD1-201ENST00000381513 MYOFQ9NZM1 2061 aa16.98■□□□□ 0.31
SMARCD1-201ENST00000381513 IGKV1-8A0A0C4DH67 115 aa16.98■□□□□ 0.31
SMARCD1-201ENST00000381513 A0A1W2PPV9 198 aa16.98■□□□□ 0.31
SMARCD1-201ENST00000381513 ATXN7O15265 892 aaPredicted RBP16.98■□□□□ 0.31
SMARCD1-201ENST00000381513 DANCRP0C864 163 aa16.98■□□□□ 0.31
SMARCD1-201ENST00000381513 CEACAM6P40199 344 aa16.98■□□□□ 0.31
SMARCD1-201ENST00000381513 GPR18Q14330 331 aa16.98■□□□□ 0.31
SMARCD1-201ENST00000381513 ASTLQ6HA08 431 aaPredicted RBP16.98■□□□□ 0.31
SMARCD1-201ENST00000381513 HPSE2Q8WWQ2 592 aa16.98■□□□□ 0.31
SMARCD1-201ENST00000381513 FBXL21Q9UKT6 434 aa16.98■□□□□ 0.31
SMARCD1-201ENST00000381513 ZNF708P17019 499 aa16.98■□□□□ 0.31
SMARCD1-201ENST00000381513 TOMM20Q15388 145 aa16.98■□□□□ 0.31
SMARCD1-201ENST00000381513 POC1AQ8NBT0 407 aa16.98■□□□□ 0.31
SMARCD1-201ENST00000381513 SH3BGRL3Q9H299 93 aa16.98■□□□□ 0.31
SMARCD1-201ENST00000381513 A0A0A6YYH2 397 aa16.97■□□□□ 0.31
SMARCD1-201ENST00000381513 A6NJ64 397 aa16.97■□□□□ 0.31
SMARCD1-201ENST00000381513 METTL12A8MUP2 240 aa16.97■□□□□ 0.31
SMARCD1-201ENST00000381513 RPL29P47914 159 aaKnown RBP16.97■□□□□ 0.31
SMARCD1-201ENST00000381513 SRSF5Q13243 272 aaKnown RBP16.97■□□□□ 0.31
SMARCD1-201ENST00000381513 ZNF260Q3ZCT1 412 aa16.97■□□□□ 0.31
SMARCD1-201ENST00000381513 ASPHD2Q6ICH7 369 aa16.97■□□□□ 0.31
SMARCD1-201ENST00000381513 RAB42Q8N4Z0 105 aa16.97■□□□□ 0.31
SMARCD1-201ENST00000381513 TMEM230Q96A57 120 aa16.97■□□□□ 0.31
SMARCD1-201ENST00000381513 STACQ99469 402 aa16.97■□□□□ 0.31
SMARCD1-201ENST00000381513 HEATR5AQ86XA9 2040 aa16.97■□□□□ 0.31
SMARCD1-201ENST00000381513 TCF20Q9UGU0 1960 aaKnown RBP16.97■□□□□ 0.31
SMARCD1-201ENST00000381513 HSFX4A0A1B0GTS1 333 aaPredicted RBP16.97■□□□□ 0.31
SMARCD1-201ENST00000381513 HSFX3A0A1B0GWH4 333 aaPredicted RBP16.97■□□□□ 0.31
SMARCD1-201ENST00000381513 SOX1O00570 391 aaPredicted RBP16.97■□□□□ 0.31
SMARCD1-201ENST00000381513 ARPC3O15145 178 aa16.97■□□□□ 0.31
SMARCD1-201ENST00000381513 PGA3P0DJD8 388 aa16.97■□□□□ 0.31
SMARCD1-201ENST00000381513 ALOX5APP20292 161 aa16.97■□□□□ 0.31
SMARCD1-201ENST00000381513 GRK6P43250 576 aa16.97■□□□□ 0.31
SMARCD1-201ENST00000381513 GABRA4P48169 554 aa16.97■□□□□ 0.31
SMARCD1-201ENST00000381513 FAM78AQ5JUQ0 283 aa16.97■□□□□ 0.31
SMARCD1-201ENST00000381513 FAM166AQ6J272 317 aa16.97■□□□□ 0.31
SMARCD1-201ENST00000381513 NPSR1Q6W5P4 371 aa16.97■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 66 ms