RNA–Protein interactions for RNA: ENST00000380281.5

PRPF40B-202, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRPF40B, Length 3,154 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-202ENST00000380281 MISP3Q96FF7 219 aa11.15□□□□□ -0.62
PRPF40B-202ENST00000380281 C4orf45Q96LM5 186 aa11.15□□□□□ -0.62
PRPF40B-202ENST00000380281 SEC61A2Q9H9S3 476 aa11.15□□□□□ -0.62
PRPF40B-202ENST00000380281 MSRAQ9UJ68 235 aa11.15□□□□□ -0.62
PRPF40B-202ENST00000380281 KNTC1P50748 2209 aa11.15□□□□□ -0.62
PRPF40B-202ENST00000380281 CARD17Q5XLA6 110 aa11.15□□□□□ -0.62
PRPF40B-202ENST00000380281 GALNTL5Q7Z4T8 443 aa11.15□□□□□ -0.62
PRPF40B-202ENST00000380281 HIST2H2ABQ8IUE6 130 aaPredicted RBP11.15□□□□□ -0.62
PRPF40B-202ENST00000380281 EID2Q8N6I1 236 aa11.15□□□□□ -0.62
PRPF40B-202ENST00000380281 OR5D18Q8NGL1 313 aa11.15□□□□□ -0.62
PRPF40B-202ENST00000380281 RAB3CQ96E17 227 aa11.15□□□□□ -0.62
PRPF40B-202ENST00000380281 DCBLD2Q96PD2 775 aa11.15□□□□□ -0.62
PRPF40B-202ENST00000380281 ZNF587Q96SQ5 575 aaPredicted RBP11.15□□□□□ -0.62
PRPF40B-202ENST00000380281 LMF2Q9BU23 707 aaKnown RBP11.15□□□□□ -0.62
PRPF40B-202ENST00000380281 EGLN1Q9GZT9 426 aa11.15□□□□□ -0.62
PRPF40B-202ENST00000380281 ALX4Q9H161 411 aaPredicted RBP11.15□□□□□ -0.62
PRPF40B-202ENST00000380281 DUSP15Q9H1R2 295 aaPredicted RBP11.15□□□□□ -0.62
PRPF40B-202ENST00000380281 MMP26Q9NRE1 261 aa11.15□□□□□ -0.62
PRPF40B-202ENST00000380281 RNASEK-C17orf49H0YIS7 233 aa11.14□□□□□ -0.63
PRPF40B-202ENST00000380281 MT-ND4LP03901 98 aa11.14□□□□□ -0.63
PRPF40B-202ENST00000380281 CD79AP11912 226 aa11.14□□□□□ -0.63
PRPF40B-202ENST00000380281 GGTLC2Q14390 218 aa11.14□□□□□ -0.63
PRPF40B-202ENST00000380281 ZNF345Q14585 488 aa11.14□□□□□ -0.63
PRPF40B-202ENST00000380281 MST1LQ2TV78 715 aa11.14□□□□□ -0.63
PRPF40B-202ENST00000380281 EXOSC6Q5RKV6 272 aaKnown RBP11.14□□□□□ -0.63
PRPF40B-202ENST00000380281 FAM69BQ5VUD6 431 aa11.14□□□□□ -0.63
PRPF40B-202ENST00000380281 CDC20BQ86Y33 519 aa11.14□□□□□ -0.63
PRPF40B-202ENST00000380281 TGIF2LXQ8IUE1 241 aa11.14□□□□□ -0.63
PRPF40B-202ENST00000380281 RNF141Q8WVD5 230 aa11.14□□□□□ -0.63
PRPF40B-202ENST00000380281 MAFIPQ8WZ33 124 aa11.14□□□□□ -0.63
PRPF40B-202ENST00000380281 C5orf34Q96MH7 638 aa11.14□□□□□ -0.63
PRPF40B-202ENST00000380281 ABHD6Q9BV23 337 aa11.14□□□□□ -0.63
PRPF40B-202ENST00000380281 POLE3Q9NRF9 147 aa11.14□□□□□ -0.63
PRPF40B-202ENST00000380281 CKLFQ9UBR5 152 aa11.14□□□□□ -0.63
PRPF40B-202ENST00000380281 HIF3AQ9Y2N7 669 aa11.14□□□□□ -0.63
PRPF40B-202ENST00000380281 ZNF736B4DX44 427 aaPredicted RBP11.14□□□□□ -0.63
PRPF40B-202ENST00000380281 NPIPB9F8W1W9 429 aa11.14□□□□□ -0.63
PRPF40B-202ENST00000380281 H7C1Q1 480 aa11.14□□□□□ -0.63
PRPF40B-202ENST00000380281 M0R036 132 aa11.14□□□□□ -0.63
PRPF40B-202ENST00000380281 ABHD16AO95870 558 aa11.14□□□□□ -0.63
PRPF40B-202ENST00000380281 CALCBP10092 127 aa11.14□□□□□ -0.63
PRPF40B-202ENST00000380281 RAB5AP20339 215 aa11.14□□□□□ -0.63
PRPF40B-202ENST00000380281 HTR2CP28335 458 aa11.14□□□□□ -0.63
PRPF40B-202ENST00000380281 CD34P28906 385 aa11.14□□□□□ -0.63
PRPF40B-202ENST00000380281 FAM76BQ5HYJ3 339 aa11.14□□□□□ -0.63
PRPF40B-202ENST00000380281 DHRS11Q6UWP2 260 aa11.14□□□□□ -0.63
PRPF40B-202ENST00000380281 LANCL3Q6ZV70 420 aa11.14□□□□□ -0.63
PRPF40B-202ENST00000380281 OR5M8Q8NGP6 311 aa11.14□□□□□ -0.63
PRPF40B-202ENST00000380281 SCARF2Q96GP6 870 aaPredicted RBP11.14□□□□□ -0.63
PRPF40B-202ENST00000380281 CD207Q9UJ71 328 aa11.14□□□□□ -0.63
PRPF40B-202ENST00000380281 TMED7Q9Y3B3 224 aa11.14□□□□□ -0.63
PRPF40B-202ENST00000380281 C9orf170A2RU37 121 aa11.14□□□□□ -0.63
PRPF40B-202ENST00000380281 BTBD17A6NE02 478 aa11.14□□□□□ -0.63
PRPF40B-202ENST00000380281 IFITM10A6NMD0 228 aa11.14□□□□□ -0.63
PRPF40B-202ENST00000380281 HOXC4P09017 264 aaPredicted RBP11.14□□□□□ -0.63
PRPF40B-202ENST00000380281 PLCXD2Q0VAA5 305 aa11.14□□□□□ -0.63
PRPF40B-202ENST00000380281 DHRS2Q13268 280 aa11.14□□□□□ -0.63
PRPF40B-202ENST00000380281 FZD2Q14332 565 aa11.14□□□□□ -0.63
PRPF40B-202ENST00000380281 USF2Q15853 346 aaPredicted RBP11.14□□□□□ -0.63
PRPF40B-202ENST00000380281 SLC35D3Q5M8T2 416 aa11.14□□□□□ -0.63
PRPF40B-202ENST00000380281 ANKRD16Q6P6B7 361 aa11.14□□□□□ -0.63
PRPF40B-202ENST00000380281 CLEC9AQ6UXN8 241 aa11.14□□□□□ -0.63
PRPF40B-202ENST00000380281 COX15Q7KZN9 410 aa11.14□□□□□ -0.63
PRPF40B-202ENST00000380281 RTL10Q7L3V2 364 aa11.14□□□□□ -0.63
PRPF40B-202ENST00000380281 DCXRQ7Z4W1 244 aa11.14□□□□□ -0.63
PRPF40B-202ENST00000380281 DPPA2Q7Z7J5 298 aa11.14□□□□□ -0.63
PRPF40B-202ENST00000380281 OR13C9Q8NGT0 318 aa11.14□□□□□ -0.63
PRPF40B-202ENST00000380281 FGGYQ96C11 551 aa11.14□□□□□ -0.63
PRPF40B-202ENST00000380281 MTIF3Q9H2K0 278 aaKnown RBP11.14□□□□□ -0.63
PRPF40B-202ENST00000380281 SMOC1Q9H4F8 434 aa11.14□□□□□ -0.63
PRPF40B-202ENST00000380281 PRDM13Q9H4Q3 707 aa11.14□□□□□ -0.63
PRPF40B-202ENST00000380281 FN3KRPQ9HA64 309 aa11.14□□□□□ -0.63
PRPF40B-202ENST00000380281 POLR1DQ9Y2S0 133 aa11.14□□□□□ -0.63
PRPF40B-202ENST00000380281 CLDN16Q9Y5I7 305 aa11.14□□□□□ -0.63
PRPF40B-202ENST00000380281 TMEM150CB9EJG8 249 aa11.13□□□□□ -0.63
PRPF40B-202ENST00000380281 CD8AP01732 235 aa11.13□□□□□ -0.63
PRPF40B-202ENST00000380281 NR2C1P13056 603 aa11.13□□□□□ -0.63
PRPF40B-202ENST00000380281 RBP2P50120 134 aa11.13□□□□□ -0.63
PRPF40B-202ENST00000380281 PRSS12P56730 875 aa11.13□□□□□ -0.63
PRPF40B-202ENST00000380281 INSM1Q01101 510 aaPredicted RBP11.13□□□□□ -0.63
PRPF40B-202ENST00000380281 SLC17A1Q14916 467 aa11.13□□□□□ -0.63
PRPF40B-202ENST00000380281 ZNF684Q5T5D7 378 aa11.13□□□□□ -0.63
PRPF40B-202ENST00000380281 TMEM225Q6GV28 225 aa11.13□□□□□ -0.63
PRPF40B-202ENST00000380281 ASPHD2Q6ICH7 369 aa11.13□□□□□ -0.63
PRPF40B-202ENST00000380281 BAP18Q8IXM2 172 aa11.13□□□□□ -0.63
PRPF40B-202ENST00000380281 ZNF615Q8N8J6 731 aa11.13□□□□□ -0.63
PRPF40B-202ENST00000380281 OTOSQ8NHW6 89 aa11.13□□□□□ -0.63
PRPF40B-202ENST00000380281 ADAMTS18Q8TE60 1221 aa11.13□□□□□ -0.63
PRPF40B-202ENST00000380281 PTPMT1Q8WUK0 201 aaPredicted RBP11.13□□□□□ -0.63
PRPF40B-202ENST00000380281 SECTM1Q8WVN6 248 aa11.13□□□□□ -0.63
PRPF40B-202ENST00000380281 ROBO4Q8WZ75 1007 aa11.13□□□□□ -0.63
PRPF40B-202ENST00000380281 PMM1Q92871 262 aa11.13□□□□□ -0.63
PRPF40B-202ENST00000380281 PIK3IP1Q96FE7 263 aa11.13□□□□□ -0.63
PRPF40B-202ENST00000380281 KLHDC7BQ96G42 594 aa11.13□□□□□ -0.63
PRPF40B-202ENST00000380281 SLC41A2Q96JW4 573 aa11.13□□□□□ -0.63
PRPF40B-202ENST00000380281 SULT4A1Q9BR01 284 aa11.13□□□□□ -0.63
PRPF40B-202ENST00000380281 NUDT9Q9BW91 350 aa11.13□□□□□ -0.63
PRPF40B-202ENST00000380281 UNKLQ9H9P5 680 aaKnown RBP11.13□□□□□ -0.63
PRPF40B-202ENST00000380281 MRPL22Q9NWU5 206 aaKnown RBP11.13□□□□□ -0.63
PRPF40B-202ENST00000380281 GFOD1Q9NXC2 390 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms