RNA–Protein interactions for RNA: ENST00000380276.6

U2AF1-202, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene U2AF1, Length 940 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-202ENST00000380276 SEC23BQ15437 767 aa19.18■□□□□ 0.66
U2AF1-202ENST00000380276 RSPO1Q2MKA7 263 aaPredicted RBP19.18■□□□□ 0.66
U2AF1-202ENST00000380276 SLC18B1Q6NT16 456 aa19.18■□□□□ 0.66
U2AF1-202ENST00000380276 SCCPDHQ8NBX0 429 aa19.18■□□□□ 0.66
U2AF1-202ENST00000380276 LHX4Q969G2 390 aa19.18■□□□□ 0.66
U2AF1-202ENST00000380276 HOPXQ9BPY8 73 aaPredicted RBP19.18■□□□□ 0.66
U2AF1-202ENST00000380276 ARGLU1Q9NWB6 273 aaPredicted RBP19.18■□□□□ 0.66
U2AF1-202ENST00000380276 NOP16Q9Y3C1 178 aaKnown RBP19.18■□□□□ 0.66
U2AF1-202ENST00000380276 GGT3PA6NGU5 568 aa19.17■□□□□ 0.66
U2AF1-202ENST00000380276 LGALS8O00214 317 aa19.17■□□□□ 0.66
U2AF1-202ENST00000380276 SLC22A2O15244 555 aa19.17■□□□□ 0.66
U2AF1-202ENST00000380276 RHCEP18577 417 aa19.17■□□□□ 0.66
U2AF1-202ENST00000380276 SLC6A6P31641 620 aa19.17■□□□□ 0.66
U2AF1-202ENST00000380276 ECH1Q13011 328 aa19.17■□□□□ 0.66
U2AF1-202ENST00000380276 ZNF620Q6ZNG0 422 aa19.17■□□□□ 0.66
U2AF1-202ENST00000380276 TMEM86BQ8N661 226 aa19.17■□□□□ 0.66
U2AF1-202ENST00000380276 PNLDC1Q8NA58 520 aaKnown RBP19.17■□□□□ 0.66
U2AF1-202ENST00000380276 TBC1D15Q8TC07 691 aa19.17■□□□□ 0.66
U2AF1-202ENST00000380276 SSMEM1Q8WWF3 244 aa19.17■□□□□ 0.66
U2AF1-202ENST00000380276 WDFY2Q96P53 400 aa19.17■□□□□ 0.66
U2AF1-202ENST00000380276 TBX15Q96SF7 602 aa19.17■□□□□ 0.66
U2AF1-202ENST00000380276 CITED1Q99966 193 aa19.17■□□□□ 0.66
U2AF1-202ENST00000380276 IFT27Q9BW83 186 aa19.17■□□□□ 0.66
U2AF1-202ENST00000380276 RASSF4Q9H2L5 321 aa19.17■□□□□ 0.66
U2AF1-202ENST00000380276 ACOXLQ9NUZ1 547 aa19.17■□□□□ 0.66
U2AF1-202ENST00000380276 NDUFAF4Q9P032 175 aa19.17■□□□□ 0.66
U2AF1-202ENST00000380276 POMT1Q9Y6A1 747 aa19.17■□□□□ 0.66
U2AF1-202ENST00000380276 V9GYQ6 96 aa19.17■□□□□ 0.66
U2AF1-202ENST00000380276 CENPVL3A0A0U1RRI6 287 aa19.16■□□□□ 0.66
U2AF1-202ENST00000380276 A0A1B0GWJ7 208 aa19.16■□□□□ 0.66
U2AF1-202ENST00000380276 A6NLC8 198 aa19.16■□□□□ 0.66
U2AF1-202ENST00000380276 TNFRSF13BO14836 293 aaPredicted RBP19.16■□□□□ 0.66
U2AF1-202ENST00000380276 LIPFP07098 398 aa19.16■□□□□ 0.66
U2AF1-202ENST00000380276 HIST1H1CP16403 213 aaKnown RBP19.16■□□□□ 0.66
U2AF1-202ENST00000380276 NUDT2P50583 147 aa19.16■□□□□ 0.66
U2AF1-202ENST00000380276 PDCD1Q15116 288 aa19.16■□□□□ 0.66
U2AF1-202ENST00000380276 PDZD9Q8IXQ8 264 aa19.16■□□□□ 0.66
U2AF1-202ENST00000380276 LNX2Q8N448 690 aa19.16■□□□□ 0.66
U2AF1-202ENST00000380276 SDR9C7Q8NEX9 313 aa19.16■□□□□ 0.66
U2AF1-202ENST00000380276 SPTSSAQ969W0 71 aa19.16■□□□□ 0.66
U2AF1-202ENST00000380276 TRIM15Q9C019 465 aa19.16■□□□□ 0.66
U2AF1-202ENST00000380276 SLC22A4Q9H015 551 aa19.16■□□□□ 0.66
U2AF1-202ENST00000380276 MMP27Q9H306 513 aa19.16■□□□□ 0.66
U2AF1-202ENST00000380276 OR52D1Q9H346 318 aa19.16■□□□□ 0.66
U2AF1-202ENST00000380276 C1orf123Q9NWV4 160 aa19.16■□□□□ 0.66
U2AF1-202ENST00000380276 RNF114Q9Y508 228 aa19.16■□□□□ 0.66
U2AF1-202ENST00000380276 TRAV38-1A0A0B4J264 116 aa19.15■□□□□ 0.66
U2AF1-202ENST00000380276 hCG_1807616A0A1W2PRN6 198 aa19.15■□□□□ 0.66
U2AF1-202ENST00000380276 CD300LBA8K4G0 201 aa19.15■□□□□ 0.66
U2AF1-202ENST00000380276 M0R135 149 aa19.15■□□□□ 0.66
U2AF1-202ENST00000380276 GYPAP02724 150 aa19.15■□□□□ 0.66
U2AF1-202ENST00000380276 GRPP07492 148 aa19.15■□□□□ 0.66
U2AF1-202ENST00000380276 KRTAP27-1Q3LI81 207 aa19.15■□□□□ 0.66
U2AF1-202ENST00000380276 ZNF799Q96GE5 643 aa19.15■□□□□ 0.66
U2AF1-202ENST00000380276 SMURF1Q9HCE7 757 aa19.15■□□□□ 0.66
U2AF1-202ENST00000380276 TRIM36Q9NQ86 728 aa19.15■□□□□ 0.66
U2AF1-202ENST00000380276 N6AMT1Q9Y5N5 214 aa19.15■□□□□ 0.66
U2AF1-202ENST00000380276 IGHV1-69DA0A0B4J2H0 117 aa19.14■□□□□ 0.65
U2AF1-202ENST00000380276 OOEPA6NGQ2 149 aa19.14■□□□□ 0.65
U2AF1-202ENST00000380276 GMNNO75496 209 aa19.14■□□□□ 0.65
U2AF1-202ENST00000380276 IGHV1-69P01742 117 aa19.14■□□□□ 0.65
U2AF1-202ENST00000380276 MMP9P14780 707 aa19.14■□□□□ 0.65
U2AF1-202ENST00000380276 ZNF823P16415 610 aa19.14■□□□□ 0.65
U2AF1-202ENST00000380276 ARF6P62330 175 aa19.14■□□□□ 0.65
U2AF1-202ENST00000380276 SPIBQ01892 262 aa19.14■□□□□ 0.65
U2AF1-202ENST00000380276 RFX4Q33E94 735 aa19.14■□□□□ 0.65
U2AF1-202ENST00000380276 OR2AE1Q8NHA4 323 aa19.14■□□□□ 0.65
U2AF1-202ENST00000380276 EFCAB1Q9HAE3 211 aa19.14■□□□□ 0.65
U2AF1-202ENST00000380276 SAMD4AQ9UPU9 718 aaKnown RBP19.14■□□□□ 0.65
U2AF1-202ENST00000380276 A0A0G2JK05 382 aa19.13■□□□□ 0.65
U2AF1-202ENST00000380276 NDUFAB1O14561 156 aa19.13■□□□□ 0.65
U2AF1-202ENST00000380276 GPR137BO60478 399 aa19.13■□□□□ 0.65
U2AF1-202ENST00000380276 GMDSO60547 372 aa19.13■□□□□ 0.65
U2AF1-202ENST00000380276 GADD45GO95257 159 aa19.13■□□□□ 0.65
U2AF1-202ENST00000380276 IGHV4-59P01825 116 aa19.13■□□□□ 0.65
U2AF1-202ENST00000380276 POU4F2Q12837 409 aa19.13■□□□□ 0.65
U2AF1-202ENST00000380276 OCLNQ16625 522 aa19.13■□□□□ 0.65
U2AF1-202ENST00000380276 SNAI3Q3KNW1 292 aa19.13■□□□□ 0.65
U2AF1-202ENST00000380276 SLC35F1Q5T1Q4 408 aa19.13■□□□□ 0.65
U2AF1-202ENST00000380276 GLYATQ6IB77 296 aa19.13■□□□□ 0.65
U2AF1-202ENST00000380276 ST8SIA4Q92187 359 aa19.13■□□□□ 0.65
U2AF1-202ENST00000380276 DYRK2Q92630 601 aa19.13■□□□□ 0.65
U2AF1-202ENST00000380276 PKP2Q99959 881 aa19.13■□□□□ 0.65
U2AF1-202ENST00000380276 RBM4BQ9BQ04 359 aaKnown RBP19.13■□□□□ 0.65
U2AF1-202ENST00000380276 PNRC2Q9NPJ4 139 aaKnown RBP19.13■□□□□ 0.65
U2AF1-202ENST00000380276 CYB5R1Q9UHQ9 305 aa19.13■□□□□ 0.65
U2AF1-202ENST00000380276 A0A0U1RQK1 487 aa19.12■□□□□ 0.65
U2AF1-202ENST00000380276 NDUFA2O43678 99 aa19.12■□□□□ 0.65
U2AF1-202ENST00000380276 OR10H3O60404 316 aa19.12■□□□□ 0.65
U2AF1-202ENST00000380276 RPS27P42677 84 aaKnown RBP19.12■□□□□ 0.65
U2AF1-202ENST00000380276 KRTAP10-3P60369 221 aa19.12■□□□□ 0.65
U2AF1-202ENST00000380276 ZNF92Q03936 586 aa19.12■□□□□ 0.65
U2AF1-202ENST00000380276 ZNF826PQ6ZT77 177 aa19.12■□□□□ 0.65
U2AF1-202ENST00000380276 BTN2A1Q7KYR7 527 aa19.12■□□□□ 0.65
U2AF1-202ENST00000380276 FAM86B1Q8N7N1 296 aa19.12■□□□□ 0.65
U2AF1-202ENST00000380276 MAP6Q96JE9 813 aa19.12■□□□□ 0.65
U2AF1-202ENST00000380276 SIRPDQ9H106 197 aa19.12■□□□□ 0.65
U2AF1-202ENST00000380276 IGHV3OR15-7A0A075B7D8 119 aa19.11■□□□□ 0.65
U2AF1-202ENST00000380276 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP19.11■□□□□ 0.65
U2AF1-202ENST00000380276 OR6C68A6NDL8 312 aa19.11■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms