RNA–Protein interactions for RNA: ENST00000379826.4

SMAD9-202, Transcript of SMAD family member 9, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SMAD9, Length 5,592 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9-202ENST00000379826 PTGES2Q9H7Z7 377 aa10.22□□□□□ -0.77
SMAD9-202ENST00000379826 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP10.22□□□□□ -0.77
SMAD9-202ENST00000379826 OR13C7P0DN81 318 aa10.22□□□□□ -0.77
SMAD9-202ENST00000379826 MFSD13AQ14CX5 517 aa10.22□□□□□ -0.77
SMAD9-202ENST00000379826 OVCH2Q7RTZ1 564 aa10.22□□□□□ -0.77
SMAD9-202ENST00000379826 VSTM2LQ96N03 204 aa10.22□□□□□ -0.77
SMAD9-202ENST00000379826 TXNIPQ9H3M7 391 aa10.22□□□□□ -0.77
SMAD9-202ENST00000379826 SPAARA0A1B0GVQ0 90 aa10.21□□□□□ -0.77
SMAD9-202ENST00000379826 RBMXL2O75526 392 aaKnown RBP10.21□□□□□ -0.77
SMAD9-202ENST00000379826 MT-ATP6P00846 226 aa10.21□□□□□ -0.77
SMAD9-202ENST00000379826 EPHA1P21709 976 aa10.21□□□□□ -0.77
SMAD9-202ENST00000379826 ZNF273Q14593 569 aa10.21□□□□□ -0.77
SMAD9-202ENST00000379826 OR56B1Q8NGI3 324 aa10.21□□□□□ -0.77
SMAD9-202ENST00000379826 TCEAL3Q969E4 200 aa10.21□□□□□ -0.77
SMAD9-202ENST00000379826 CNTD2Q9H8S5 307 aa10.21□□□□□ -0.77
SMAD9-202ENST00000379826 KLK13Q9UKR3 277 aa10.21□□□□□ -0.77
SMAD9-202ENST00000379826 PUS1Q9Y606 427 aaKnown RBP eCLIP10.21□□□□□ -0.77
SMAD9-202ENST00000379826 PCNTO95613 3336 aa10.21□□□□□ -0.77
SMAD9-202ENST00000379826 OR4C45A6NMZ5 311 aa10.21□□□□□ -0.77
SMAD9-202ENST00000379826 IGHG1P01857 330 aa10.21□□□□□ -0.77
SMAD9-202ENST00000379826 APOC1P02654 83 aa10.21□□□□□ -0.77
SMAD9-202ENST00000379826 SFTA3P0C7M3 94 aa10.21□□□□□ -0.77
SMAD9-202ENST00000379826 CTLA4P16410 223 aa10.21□□□□□ -0.77
SMAD9-202ENST00000379826 OMGP23515 440 aa10.21□□□□□ -0.77
SMAD9-202ENST00000379826 CX3CR1P49238 355 aa10.21□□□□□ -0.77
SMAD9-202ENST00000379826 OR1D5P58170 312 aa10.21□□□□□ -0.77
SMAD9-202ENST00000379826 ZNF529Q6P280 563 aa10.21□□□□□ -0.77
SMAD9-202ENST00000379826 BAP18Q8IXM2 172 aa10.21□□□□□ -0.77
SMAD9-202ENST00000379826 NPDC1Q9NQX5 325 aaPredicted RBP10.21□□□□□ -0.77
SMAD9-202ENST00000379826 VSIG4Q9Y279 399 aa10.21□□□□□ -0.77
SMAD9-202ENST00000379826 PLXNA4Q9HCM2 1894 aa10.21□□□□□ -0.78
SMAD9-202ENST00000379826 TRGV8A0A0C4DH27 118 aa10.21□□□□□ -0.78
SMAD9-202ENST00000379826 HSF1Q00613 529 aa10.21□□□□□ -0.78
SMAD9-202ENST00000379826 FHL5Q5TD97 284 aa10.21□□□□□ -0.78
SMAD9-202ENST00000379826 OR5M9Q8NGP3 310 aa10.21□□□□□ -0.78
SMAD9-202ENST00000379826 RNF128Q8TEB7 428 aa10.21□□□□□ -0.78
SMAD9-202ENST00000379826 MRPS24Q96EL2 167 aaKnown RBP10.21□□□□□ -0.78
SMAD9-202ENST00000379826 HEXA-AS1Q9H8Q6 139 aa10.21□□□□□ -0.78
SMAD9-202ENST00000379826 SLC22A11Q9NSA0 550 aa10.21□□□□□ -0.78
SMAD9-202ENST00000379826 C1orf123Q9NWV4 160 aa10.21□□□□□ -0.78
SMAD9-202ENST00000379826 NDRG3Q9UGV2 375 aa10.21□□□□□ -0.78
SMAD9-202ENST00000379826 RPS10-NUDT3A0A1W2PQS6 291 aa10.21□□□□□ -0.78
SMAD9-202ENST00000379826 K7EQS6 105 aa10.21□□□□□ -0.78
SMAD9-202ENST00000379826 SULT1C2O00338 296 aa10.21□□□□□ -0.78
SMAD9-202ENST00000379826 TO15178 435 aa10.21□□□□□ -0.78
SMAD9-202ENST00000379826 IFNA2P01563 188 aa10.21□□□□□ -0.78
SMAD9-202ENST00000379826 RPS4Y1P22090 263 aaKnown RBP10.21□□□□□ -0.78
SMAD9-202ENST00000379826 PPICP45877 212 aa10.21□□□□□ -0.78
SMAD9-202ENST00000379826 RPS11P62280 158 aaKnown RBP eCLIP10.21□□□□□ -0.78
SMAD9-202ENST00000379826 MOGAT2Q3SYC2 334 aa10.21□□□□□ -0.78
SMAD9-202ENST00000379826 OR52N4Q8NGI2 321 aa10.21□□□□□ -0.78
SMAD9-202ENST00000379826 OR5M8Q8NGP6 311 aa10.21□□□□□ -0.78
SMAD9-202ENST00000379826 KCNG3Q8TAE7 436 aa10.21□□□□□ -0.78
SMAD9-202ENST00000379826 PBDC1Q9BVG4 233 aa10.21□□□□□ -0.78
SMAD9-202ENST00000379826 NXT1Q9UKK6 140 aaKnown RBP10.21□□□□□ -0.78
SMAD9-202ENST00000379826 ADRA2CP18825 462 aa10.2□□□□□ -0.78
SMAD9-202ENST00000379826 CHATP28329 748 aa10.2□□□□□ -0.78
SMAD9-202ENST00000379826 CLDN17P56750 224 aa10.2□□□□□ -0.78
SMAD9-202ENST00000379826 ATG4DQ86TL0 474 aaPredicted RBP10.2□□□□□ -0.78
SMAD9-202ENST00000379826 EXD3Q8N9H8 876 aa10.2□□□□□ -0.78
SMAD9-202ENST00000379826 SEH1LQ96EE3 360 aa10.2□□□□□ -0.78
SMAD9-202ENST00000379826 UBE2J1Q9Y385 318 aaPredicted RBP10.2□□□□□ -0.78
SMAD9-202ENST00000379826 MRPS18BQ9Y676 258 aaKnown RBP10.2□□□□□ -0.78
SMAD9-202ENST00000379826 MED19A0JLT2 244 aaPredicted RBP10.2□□□□□ -0.78
SMAD9-202ENST00000379826 TAS2R46P59540 309 aa10.2□□□□□ -0.78
SMAD9-202ENST00000379826 MPPED2Q15777 294 aa10.2□□□□□ -0.78
SMAD9-202ENST00000379826 PRAMEF20Q5VT98 475 aa10.2□□□□□ -0.78
SMAD9-202ENST00000379826 GRINAQ7Z429 371 aa10.2□□□□□ -0.78
SMAD9-202ENST00000379826 AKR1E2Q96JD6 320 aa10.2□□□□□ -0.78
SMAD9-202ENST00000379826 USB1Q9BQ65 265 aaKnown RBP10.2□□□□□ -0.78
SMAD9-202ENST00000379826 CMSS1Q9BQ75 279 aaKnown RBP10.2□□□□□ -0.78
SMAD9-202ENST00000379826 SULT2B1O00204 365 aa10.2□□□□□ -0.78
SMAD9-202ENST00000379826 TNFRSF10CO14798 259 aa10.2□□□□□ -0.78
SMAD9-202ENST00000379826 RAD51DO75771 328 aa10.2□□□□□ -0.78
SMAD9-202ENST00000379826 MYF5P13349 255 aa10.2□□□□□ -0.78
SMAD9-202ENST00000379826 PHLDA2Q53GA4 152 aa10.2□□□□□ -0.78
SMAD9-202ENST00000379826 C16orf47Q6ZP98 133 aaPredicted RBP10.2□□□□□ -0.78
SMAD9-202ENST00000379826 H1FNTQ75WM6 255 aaPredicted RBP10.2□□□□□ -0.78
SMAD9-202ENST00000379826 TCTEX1D2Q8WW35 142 aa10.2□□□□□ -0.78
SMAD9-202ENST00000379826 RGP1Q92546 391 aaPredicted RBP10.2□□□□□ -0.78
SMAD9-202ENST00000379826 CNTNAP3Q9BZ76 1288 aa10.2□□□□□ -0.78
SMAD9-202ENST00000379826 RHOFQ9HBH0 211 aa10.2□□□□□ -0.78
SMAD9-202ENST00000379826 KCNJ16Q9NPI9 418 aa10.2□□□□□ -0.78
SMAD9-202ENST00000379826 HIF3AQ9Y2N7 669 aa10.2□□□□□ -0.78
SMAD9-202ENST00000379826 FLVCR1Q9Y5Y0 555 aa10.2□□□□□ -0.78
SMAD9-202ENST00000379826 ATG2BQ96BY7 2078 aa10.2□□□□□ -0.78
SMAD9-202ENST00000379826 METTL12A8MUP2 240 aa10.2□□□□□ -0.78
SMAD9-202ENST00000379826 CT45A8P0DMV1 189 aa10.2□□□□□ -0.78
SMAD9-202ENST00000379826 CT45A9P0DMV2 189 aa10.2□□□□□ -0.78
SMAD9-202ENST00000379826 ZNF44P15621 663 aa10.2□□□□□ -0.78
SMAD9-202ENST00000379826 PPIAP62937 165 aaKnown RBP10.2□□□□□ -0.78
SMAD9-202ENST00000379826 CT45A2Q5DJT8 189 aa10.2□□□□□ -0.78
SMAD9-202ENST00000379826 OGFOD3Q6PK18 319 aa10.2□□□□□ -0.78
SMAD9-202ENST00000379826 CLEC9AQ6UXN8 241 aa10.2□□□□□ -0.78
SMAD9-202ENST00000379826 Q6ZRG5 221 aa10.2□□□□□ -0.78
SMAD9-202ENST00000379826 HSD17B11Q8NBQ5 300 aa10.2□□□□□ -0.78
SMAD9-202ENST00000379826 PCDHGA1Q9Y5H4 931 aa10.2□□□□□ -0.78
SMAD9-202ENST00000379826 EFEMP2O95967 443 aa10.2□□□□□ -0.78
SMAD9-202ENST00000379826 CD46P15529 392 aa10.2□□□□□ -0.78
SMAD9-202ENST00000379826 DCAF7P61962 342 aa10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms