RNA–Protein interactions for RNA: ENST00000379215.8

ECHDC3-201, Transcript of enoyl-CoA hydratase domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ECHDC3, Length 1,649 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3-201ENST00000379215 TBC1D28Q2M2D7 210 aa21.35■■□□□ 1.01
ECHDC3-201ENST00000379215 PLPP7Q8NBV4 271 aa21.35■■□□□ 1.01
ECHDC3-201ENST00000379215 KCTD12Q96CX2 325 aaKnown RBP21.35■■□□□ 1.01
ECHDC3-201ENST00000379215 C10orf35Q96D05 121 aa21.35■■□□□ 1.01
ECHDC3-201ENST00000379215 POM121L2Q96KW2 1035 aa21.35■■□□□ 1.01
ECHDC3-201ENST00000379215 BARHL1Q9BZE3 327 aa21.35■■□□□ 1.01
ECHDC3-201ENST00000379215 ZNF319Q9P2F9 582 aa21.35■■□□□ 1.01
ECHDC3-201ENST00000379215 PEX16Q9Y5Y5 336 aa21.35■■□□□ 1.01
ECHDC3-201ENST00000379215 SPTA1P02549 2419 aa21.34■■□□□ 1.01
ECHDC3-201ENST00000379215 LOC390937A0A1W2PQ73 354 aa21.34■■□□□ 1.01
ECHDC3-201ENST00000379215 C5orf49A4QMS7 147 aa21.34■■□□□ 1.01
ECHDC3-201ENST00000379215 ANKRD61A6NGH8 418 aa21.34■■□□□ 1.01
ECHDC3-201ENST00000379215 OR5H1A6NKK0 313 aa21.34■■□□□ 1.01
ECHDC3-201ENST00000379215 DHRS7CA6NNS2 312 aa21.34■■□□□ 1.01
ECHDC3-201ENST00000379215 NOTOA8MTQ0 251 aa21.34■■□□□ 1.01
ECHDC3-201ENST00000379215 EEF1E1-BLOC1S5C9J1V9 151 aa21.34■■□□□ 1.01
ECHDC3-201ENST00000379215 J3QW42 95 aa21.34■■□□□ 1.01
ECHDC3-201ENST00000379215 EEF1E1O43324 174 aaKnown RBP21.34■■□□□ 1.01
ECHDC3-201ENST00000379215 COLCA1Q6ZS62 124 aa21.34■■□□□ 1.01
ECHDC3-201ENST00000379215 NAA40Q86UY6 237 aa21.34■■□□□ 1.01
ECHDC3-201ENST00000379215 PARP16Q8N5Y8 322 aa21.34■■□□□ 1.01
ECHDC3-201ENST00000379215 FAM169BQ8N8A8 192 aa21.34■■□□□ 1.01
ECHDC3-201ENST00000379215 SLC30A7Q8NEW0 376 aa21.34■■□□□ 1.01
ECHDC3-201ENST00000379215 TBC1D15Q8TC07 691 aa21.34■■□□□ 1.01
ECHDC3-201ENST00000379215 ACOT12Q8WYK0 555 aa21.34■■□□□ 1.01
ECHDC3-201ENST00000379215 AKAP1Q92667 903 aaKnown RBP eCLIP21.34■■□□□ 1.01
ECHDC3-201ENST00000379215 C6orf62Q9GZU0 229 aaPredicted RBP21.34■■□□□ 1.01
ECHDC3-201ENST00000379215 PLEKHA1Q9HB21 404 aa21.34■■□□□ 1.01
ECHDC3-201ENST00000379215 PKD1L2Q7Z442 2459 aa21.34■■□□□ 1.01
ECHDC3-201ENST00000379215 LOC100509620A0A075B734 347 aa21.33■■□□□ 1.01
ECHDC3-201ENST00000379215 DHRS3O75911 302 aa21.33■■□□□ 1.01
ECHDC3-201ENST00000379215 ZNF20P17024 532 aa21.33■■□□□ 1.01
ECHDC3-201ENST00000379215 S100A5P33763 92 aa21.33■■□□□ 1.01
ECHDC3-201ENST00000379215 MAGEB1P43366 347 aa21.33■■□□□ 1.01
ECHDC3-201ENST00000379215 DYNC1I2Q13409 638 aaKnown RBP21.33■■□□□ 1.01
ECHDC3-201ENST00000379215 GFOD2Q3B7J2 385 aa21.33■■□□□ 1.01
ECHDC3-201ENST00000379215 TIMM23BQ5SRD1 257 aa21.33■■□□□ 1.01
ECHDC3-201ENST00000379215 STAC2Q6ZMT1 411 aa21.33■■□□□ 1.01
ECHDC3-201ENST00000379215 Q6ZSR3 168 aa21.33■■□□□ 1.01
ECHDC3-201ENST00000379215 ZNF584Q8IVC4 421 aa21.33■■□□□ 1.01
ECHDC3-201ENST00000379215 SERPINA12Q8IW75 414 aa21.33■■□□□ 1.01
ECHDC3-201ENST00000379215 STEAP2Q8NFT2 490 aa21.33■■□□□ 1.01
ECHDC3-201ENST00000379215 APOBEC3DQ96AK3 386 aaPredicted RBP21.33■■□□□ 1.01
ECHDC3-201ENST00000379215 MEGF11A6BM72 1044 aa21.33■■□□□ 1
ECHDC3-201ENST00000379215 H3BSH0 61 aa21.33■■□□□ 1
ECHDC3-201ENST00000379215 ZNF14P17017 642 aaPredicted RBP21.33■■□□□ 1
ECHDC3-201ENST00000379215 PPP3R1P63098 170 aa21.33■■□□□ 1
ECHDC3-201ENST00000379215 HGFACQ04756 655 aa21.33■■□□□ 1
ECHDC3-201ENST00000379215 SNAI3Q3KNW1 292 aa21.33■■□□□ 1
ECHDC3-201ENST00000379215 SFXN4Q6P4A7 337 aa21.33■■□□□ 1
ECHDC3-201ENST00000379215 SSX8Q7RTT4 187 aa21.33■■□□□ 1
ECHDC3-201ENST00000379215 WDR31Q8NA23 367 aa21.33■■□□□ 1
ECHDC3-201ENST00000379215 FAM71F1Q96KD3 344 aaPredicted RBP21.33■■□□□ 1
ECHDC3-201ENST00000379215 ZNF75AQ96N20 296 aa21.33■■□□□ 1
ECHDC3-201ENST00000379215 OPA3Q9H6K4 179 aa21.33■■□□□ 1
ECHDC3-201ENST00000379215 PLEKHB1Q9UF11 243 aaPredicted RBP21.33■■□□□ 1
ECHDC3-201ENST00000379215 CCNOP22674 350 aa21.32■■□□□ 1
ECHDC3-201ENST00000379215 ST3GAL2Q16842 350 aa21.32■■□□□ 1
ECHDC3-201ENST00000379215 MZT2AQ6P582 158 aa21.32■■□□□ 1
ECHDC3-201ENST00000379215 PGAP1Q75T13 922 aa21.32■■□□□ 1
ECHDC3-201ENST00000379215 OR5D14Q8NGL3 314 aa21.32■■□□□ 1
ECHDC3-201ENST00000379215 OR6Q1Q8NGQ2 317 aa21.32■■□□□ 1
ECHDC3-201ENST00000379215 REEP6Q96HR9 211 aa21.32■■□□□ 1
ECHDC3-201ENST00000379215 ZCCHC4Q9H5U6 513 aa21.32■■□□□ 1
ECHDC3-201ENST00000379215 JKAMPQ9P055 326 aa21.32■■□□□ 1
ECHDC3-201ENST00000379215 OSGIN2Q9Y236 505 aa21.32■■□□□ 1
ECHDC3-201ENST00000379215 ACACBO00763 2458 aa21.32■■□□□ 1
ECHDC3-201ENST00000379215 ANXA2P2A6NMY6 339 aa21.31■■□□□ 1
ECHDC3-201ENST00000379215 IGKV3-15P01624 115 aa21.31■■□□□ 1
ECHDC3-201ENST00000379215 MALLQ13021 153 aa21.31■■□□□ 1
ECHDC3-201ENST00000379215 TSC22D1Q15714 1073 aa21.31■■□□□ 1
ECHDC3-201ENST00000379215 MOGQ16653 247 aa21.31■■□□□ 1
ECHDC3-201ENST00000379215 OR14K1Q8NGZ2 314 aa21.31■■□□□ 1
ECHDC3-201ENST00000379215 SGK3Q96BR1 496 aa21.31■■□□□ 1
ECHDC3-201ENST00000379215 FGGYQ96C11 551 aa21.31■■□□□ 1
ECHDC3-201ENST00000379215 MRI1Q9BV20 369 aa21.31■■□□□ 1
ECHDC3-201ENST00000379215 OR10A4Q9H209 315 aa21.31■■□□□ 1
ECHDC3-201ENST00000379215 SMURF1Q9HCE7 757 aa21.31■■□□□ 1
ECHDC3-201ENST00000379215 V9GY05 133 aa21.31■■□□□ 1
ECHDC3-201ENST00000379215 V9GYS6 101 aa21.31■■□□□ 1
ECHDC3-201ENST00000379215 NCR1O76036 304 aa21.3■■□□□ 1
ECHDC3-201ENST00000379215 IGFBP3P17936 291 aaPredicted RBP21.3■■□□□ 1
ECHDC3-201ENST00000379215 CEP78Q5JTW2 689 aa21.3■■□□□ 1
ECHDC3-201ENST00000379215 LRRTM1Q86UE6 522 aa21.3■■□□□ 1
ECHDC3-201ENST00000379215 NKAIN3Q8N8D7 197 aa21.3■■□□□ 1
ECHDC3-201ENST00000379215 OR5L1Q8NGL2 311 aa21.3■■□□□ 1
ECHDC3-201ENST00000379215 S100ZQ8WXG8 99 aa21.3■■□□□ 1
ECHDC3-201ENST00000379215 SPSB4Q96A44 273 aa21.3■■□□□ 1
ECHDC3-201ENST00000379215 CDH20Q9HBT6 801 aa21.3■■□□□ 1
ECHDC3-201ENST00000379215 TBCCD1Q9NVR7 557 aa21.3■■□□□ 1
ECHDC3-201ENST00000379215 AK6Q9Y3D8 172 aaKnown RBP21.3■■□□□ 1
ECHDC3-201ENST00000379215 INTS1Q8N201 2190 aaKnown RBP21.3■■□□□ 1
ECHDC3-201ENST00000379215 TRAV8-7A0A075B6U6 113 aa21.29■■□□□ 1
ECHDC3-201ENST00000379215 A0A0G2JK05 382 aa21.29■■□□□ 1
ECHDC3-201ENST00000379215 SMIM30A4D0T7 59 aa21.29■■□□□ 1
ECHDC3-201ENST00000379215 ICMTO60725 284 aa21.29■■□□□ 1
ECHDC3-201ENST00000379215 ERCC1P07992 297 aaPredicted RBP21.29■■□□□ 1
ECHDC3-201ENST00000379215 GNALP38405 381 aa21.29■■□□□ 1
ECHDC3-201ENST00000379215 IDH3GP51553 393 aaPredicted RBP21.29■■□□□ 1
ECHDC3-201ENST00000379215 CAV3P56539 151 aa21.29■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 75.9 ms