RNA–Protein interactions for RNA: ENST00000377865.6

PCDH9-202, Transcript of protocadherin 9, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PCDH9, Length 5,709 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-202ENST00000377865 THBS4P35443 961 aa7.9□□□□□ -1.14
PCDH9-202ENST00000377865 AGFG1P52594 562 aaKnown RBP7.9□□□□□ -1.14
PCDH9-202ENST00000377865 RAB31Q13636 194 aa7.9□□□□□ -1.14
PCDH9-202ENST00000377865 DEFB133Q30KQ1 61 aa7.9□□□□□ -1.14
PCDH9-202ENST00000377865 OR5D18Q8NGL1 313 aa7.9□□□□□ -1.14
PCDH9-202ENST00000377865 SLC37A2Q8TED4 501 aa7.9□□□□□ -1.14
PCDH9-202ENST00000377865 MAP3K3Q99759 626 aa7.9□□□□□ -1.14
PCDH9-202ENST00000377865 BRCA1P38398 1863 aaKnown RBP7.9□□□□□ -1.14
PCDH9-202ENST00000377865 MSR1P21757 451 aa7.9□□□□□ -1.14
PCDH9-202ENST00000377865 CDKN2AP42771 156 aaKnown RBP7.9□□□□□ -1.14
PCDH9-202ENST00000377865 H3F3AP84243 136 aa7.9□□□□□ -1.14
PCDH9-202ENST00000377865 GUK1Q16774 197 aa7.9□□□□□ -1.14
PCDH9-202ENST00000377865 MOGAT2Q3SYC2 334 aa7.9□□□□□ -1.14
PCDH9-202ENST00000377865 OR4S1Q8NGB4 309 aa7.9□□□□□ -1.14
PCDH9-202ENST00000377865 RPS4Y2Q8TD47 263 aa7.9□□□□□ -1.14
PCDH9-202ENST00000377865 PIGCQ92535 297 aa7.9□□□□□ -1.14
PCDH9-202ENST00000377865 HHIPQ96QV1 700 aa7.9□□□□□ -1.14
PCDH9-202ENST00000377865 NXF5Q9H1B4 397 aaKnown RBP7.9□□□□□ -1.14
PCDH9-202ENST00000377865 CES1P1Q9UKY3 287 aa7.9□□□□□ -1.14
PCDH9-202ENST00000377865 PLSCR5A0PG75 271 aa7.9□□□□□ -1.14
PCDH9-202ENST00000377865 STMND1H3BQB6 276 aa7.9□□□□□ -1.14
PCDH9-202ENST00000377865 CDK2AP1O14519 115 aa7.9□□□□□ -1.14
PCDH9-202ENST00000377865 AKR7A3O95154 331 aa7.9□□□□□ -1.14
PCDH9-202ENST00000377865 IGF2P01344 180 aa7.9□□□□□ -1.14
PCDH9-202ENST00000377865 ANKRD34CP0C6C1 535 aa7.9□□□□□ -1.14
PCDH9-202ENST00000377865 HTR5AP47898 357 aa7.9□□□□□ -1.14
PCDH9-202ENST00000377865 MRPS34P82930 218 aaKnown RBP7.9□□□□□ -1.14
PCDH9-202ENST00000377865 OR5T1Q8NG75 326 aa7.9□□□□□ -1.14
PCDH9-202ENST00000377865 FRZBQ92765 325 aa7.9□□□□□ -1.14
PCDH9-202ENST00000377865 RAB9BQ9NP90 201 aa7.9□□□□□ -1.14
PCDH9-202ENST00000377865 GAR1Q9NY12 217 aaKnown RBP7.9□□□□□ -1.14
PCDH9-202ENST00000377865 WDR90Q96KV7 1748 aa7.9□□□□□ -1.15
PCDH9-202ENST00000377865 MPTX1A8MV57 137 aa7.9□□□□□ -1.15
PCDH9-202ENST00000377865 IDSB3KWA1 339 aa7.9□□□□□ -1.15
PCDH9-202ENST00000377865 H7C1Q1 480 aa7.9□□□□□ -1.15
PCDH9-202ENST00000377865 ZNF354AO60765 605 aaPredicted RBP7.9□□□□□ -1.15
PCDH9-202ENST00000377865 OMGP23515 440 aa7.9□□□□□ -1.15
PCDH9-202ENST00000377865 PSMB3P49720 205 aa7.9□□□□□ -1.15
PCDH9-202ENST00000377865 ECH1Q13011 328 aa7.9□□□□□ -1.15
PCDH9-202ENST00000377865 PRTGQ2VWP7 1150 aa7.9□□□□□ -1.15
PCDH9-202ENST00000377865 ZNF100Q8IYN0 542 aa7.9□□□□□ -1.15
PCDH9-202ENST00000377865 LRRC18Q8N456 261 aa7.9□□□□□ -1.15
PCDH9-202ENST00000377865 OR11G2Q8NGC1 345 aa7.9□□□□□ -1.15
PCDH9-202ENST00000377865 KTI12Q96EK9 354 aaPredicted RBP7.9□□□□□ -1.15
PCDH9-202ENST00000377865 MVB12AQ96EY5 273 aa7.9□□□□□ -1.15
PCDH9-202ENST00000377865 PGLYRP3Q96LB9 341 aa7.9□□□□□ -1.15
PCDH9-202ENST00000377865 PRRX2Q99811 253 aa7.9□□□□□ -1.15
PCDH9-202ENST00000377865 SLC39A9Q9NUM3 307 aa7.9□□□□□ -1.15
PCDH9-202ENST00000377865 FRRS1LQ9P0K9 344 aa7.9□□□□□ -1.15
PCDH9-202ENST00000377865 A0A087WZY1 265 aa7.89□□□□□ -1.15
PCDH9-202ENST00000377865 SCGB1D1O95968 90 aa7.89□□□□□ -1.15
PCDH9-202ENST00000377865 GP1BAP07359 652 aa7.89□□□□□ -1.15
PCDH9-202ENST00000377865 IFI6P09912 130 aa7.89□□□□□ -1.15
PCDH9-202ENST00000377865 APLNRP35414 380 aa7.89□□□□□ -1.15
PCDH9-202ENST00000377865 SNRPEP62304 92 aaKnown RBP7.89□□□□□ -1.15
PCDH9-202ENST00000377865 TUSC1Q2TAM9 212 aa7.89□□□□□ -1.15
PCDH9-202ENST00000377865 TMEM176BQ3YBM2 270 aaPredicted RBP7.89□□□□□ -1.15
PCDH9-202ENST00000377865 PHLDA2Q53GA4 152 aa7.89□□□□□ -1.15
PCDH9-202ENST00000377865 ATPAF1Q5TC12 328 aaPredicted RBP7.89□□□□□ -1.15
PCDH9-202ENST00000377865 OR56B2PQ8NGI1 322 aa7.89□□□□□ -1.15
PCDH9-202ENST00000377865 OR5L1Q8NGL2 311 aa7.89□□□□□ -1.15
PCDH9-202ENST00000377865 PSMF1Q92530 271 aa7.89□□□□□ -1.15
PCDH9-202ENST00000377865 TSLPQ969D9 159 aa7.89□□□□□ -1.15
PCDH9-202ENST00000377865 PIGTQ969N2 578 aa7.89□□□□□ -1.15
PCDH9-202ENST00000377865 TAAR8Q969N4 342 aa7.89□□□□□ -1.15
PCDH9-202ENST00000377865 PTX4Q96A99 478 aa7.89□□□□□ -1.15
PCDH9-202ENST00000377865 GPR84Q9NQS5 396 aa7.89□□□□□ -1.15
PCDH9-202ENST00000377865 FLRT3Q9NZU0 649 aa7.89□□□□□ -1.15
PCDH9-202ENST00000377865 ANKUB1A6NFN9 424 aa7.89□□□□□ -1.15
PCDH9-202ENST00000377865 ZNF724A8MTY0 619 aa7.89□□□□□ -1.15
PCDH9-202ENST00000377865 HIST1H1DP16402 221 aaKnown RBP7.89□□□□□ -1.15
PCDH9-202ENST00000377865 FASLGP48023 281 aa7.89□□□□□ -1.15
PCDH9-202ENST00000377865 HTD2P86397 168 aa7.89□□□□□ -1.15
PCDH9-202ENST00000377865 LILRA6Q6PI73 481 aa7.89□□□□□ -1.15
PCDH9-202ENST00000377865 TSEN54Q7Z6J9 526 aaKnown RBP7.89□□□□□ -1.15
PCDH9-202ENST00000377865 OR2A5Q96R48 311 aa7.89□□□□□ -1.15
PCDH9-202ENST00000377865 C6orf106Q9H6K1 298 aaPredicted RBP7.89□□□□□ -1.15
PCDH9-202ENST00000377865 A0A1B0GX78 115 aa7.89□□□□□ -1.15
PCDH9-202ENST00000377865 CRHP06850 196 aa7.89□□□□□ -1.15
PCDH9-202ENST00000377865 DBHP09172 617 aa7.89□□□□□ -1.15
PCDH9-202ENST00000377865 CTHP32929 405 aa7.89□□□□□ -1.15
PCDH9-202ENST00000377865 NAAAQ02083 359 aa7.89□□□□□ -1.15
PCDH9-202ENST00000377865 SURF2Q15527 256 aaPredicted RBP7.89□□□□□ -1.15
PCDH9-202ENST00000377865 PRSS53Q2L4Q9 553 aa7.89□□□□□ -1.15
PCDH9-202ENST00000377865 LAMTOR1Q6IAA8 161 aa7.89□□□□□ -1.15
PCDH9-202ENST00000377865 VN1R4Q7Z5H5 301 aa7.89□□□□□ -1.15
PCDH9-202ENST00000377865 OR13H1Q8NG92 308 aa7.89□□□□□ -1.15
PCDH9-202ENST00000377865 SFT2D1Q8WV19 159 aa7.89□□□□□ -1.15
PCDH9-202ENST00000377865 SECTM1Q8WVN6 248 aa7.89□□□□□ -1.15
PCDH9-202ENST00000377865 HSD17B8Q92506 261 aa7.89□□□□□ -1.15
PCDH9-202ENST00000377865 KIR2DS1A0A191URI9 304 aa7.89□□□□□ -1.15
PCDH9-202ENST00000377865 CD38P28907 300 aa7.89□□□□□ -1.15
PCDH9-202ENST00000377865 KIR2DS4P43632 304 aa7.89□□□□□ -1.15
PCDH9-202ENST00000377865 METAP1P53582 386 aa7.89□□□□□ -1.15
PCDH9-202ENST00000377865 ERVK-16P61578 105 aa7.89□□□□□ -1.15
PCDH9-202ENST00000377865 FZD2Q14332 565 aa7.89□□□□□ -1.15
PCDH9-202ENST00000377865 KIR2DS1Q14954 304 aa7.89□□□□□ -1.15
PCDH9-202ENST00000377865 SEZ6L2Q6UXD5 910 aa7.89□□□□□ -1.15
PCDH9-202ENST00000377865 ZNF610Q8N9Z0 462 aa7.89□□□□□ -1.15
PCDH9-202ENST00000377865 OR4N2Q8NGD1 307 aa7.89□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms