RNA–Protein interactions for RNA: ENST00000377798.8

POLR1E-202, Transcript of RNA polymerase I subunit E, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene POLR1E, Length 1,868 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1E-202ENST00000377798 ADAT3Q96EY9 351 aaPredicted RBP12.89□□□□□ -0.35
POLR1E-202ENST00000377798 FAM71F1Q96KD3 344 aaPredicted RBP12.89□□□□□ -0.35
POLR1E-202ENST00000377798 SOX7Q9BT81 388 aa12.89□□□□□ -0.35
POLR1E-202ENST00000377798 SP140LQ9H930 580 aa12.89□□□□□ -0.35
POLR1E-202ENST00000377798 PLSCR4Q9NRQ2 329 aa12.89□□□□□ -0.35
POLR1E-202ENST00000377798 A0A0B4J203 849 aa12.89□□□□□ -0.35
POLR1E-202ENST00000377798 FABP12A6NFH5 140 aa12.89□□□□□ -0.35
POLR1E-202ENST00000377798 TOXO94900 526 aa12.89□□□□□ -0.35
POLR1E-202ENST00000377798 HOXD4P09016 255 aaPredicted RBP12.89□□□□□ -0.35
POLR1E-202ENST00000377798 SNRPBP14678 240 aaKnown RBP12.89□□□□□ -0.35
POLR1E-202ENST00000377798 CFPP27918 469 aa12.89□□□□□ -0.35
POLR1E-202ENST00000377798 EVX1P49640 407 aa12.89□□□□□ -0.35
POLR1E-202ENST00000377798 EIF2S3LQ2VIR3 472 aaKnown RBP12.89□□□□□ -0.35
POLR1E-202ENST00000377798 TBRG1Q3YBR2 411 aa12.89□□□□□ -0.35
POLR1E-202ENST00000377798 CNIH2Q6PI25 160 aa12.89□□□□□ -0.35
POLR1E-202ENST00000377798 FAM131AQ6UXB0 335 aa12.89□□□□□ -0.35
POLR1E-202ENST00000377798 LRRC28Q86X40 367 aaPredicted RBP12.89□□□□□ -0.35
POLR1E-202ENST00000377798 ZNF671Q8TAW3 534 aa12.89□□□□□ -0.35
POLR1E-202ENST00000377798 SNRNP40Q96DI7 357 aaKnown RBP12.89□□□□□ -0.35
POLR1E-202ENST00000377798 LYZL4Q96KX0 146 aa12.89□□□□□ -0.35
POLR1E-202ENST00000377798 MRI1Q9BV20 369 aa12.89□□□□□ -0.35
POLR1E-202ENST00000377798 LIN7BQ9HAP6 207 aa12.89□□□□□ -0.35
POLR1E-202ENST00000377798 NOX3Q9HBY0 568 aa12.89□□□□□ -0.35
POLR1E-202ENST00000377798 SPATA2Q9UM82 520 aa12.89□□□□□ -0.35
POLR1E-202ENST00000377798 DSPP15924 2871 aaKnown RBP12.89□□□□□ -0.35
POLR1E-202ENST00000377798 CHD8Q9HCK8 2581 aa12.89□□□□□ -0.35
POLR1E-202ENST00000377798 INTS1Q8N201 2190 aaKnown RBP12.88□□□□□ -0.35
POLR1E-202ENST00000377798 MEGF11A6BM72 1044 aa12.88□□□□□ -0.35
POLR1E-202ENST00000377798 LCATP04180 440 aa12.88□□□□□ -0.35
POLR1E-202ENST00000377798 TMIGD3P0DMS9 266 aaPredicted RBP12.88□□□□□ -0.35
POLR1E-202ENST00000377798 ZNF20P17024 532 aa12.88□□□□□ -0.35
POLR1E-202ENST00000377798 ELK1P19419 428 aa12.88□□□□□ -0.35
POLR1E-202ENST00000377798 COX5AP20674 150 aa12.88□□□□□ -0.35
POLR1E-202ENST00000377798 TIMP3P35625 211 aa12.88□□□□□ -0.35
POLR1E-202ENST00000377798 GNALP38405 381 aa12.88□□□□□ -0.35
POLR1E-202ENST00000377798 ZNF79Q15937 498 aa12.88□□□□□ -0.35
POLR1E-202ENST00000377798 Q6ZSR3 168 aa12.88□□□□□ -0.35
POLR1E-202ENST00000377798 CCDC54Q8NEL0 328 aa12.88□□□□□ -0.35
POLR1E-202ENST00000377798 OR51A2Q8NGJ7 313 aa12.88□□□□□ -0.35
POLR1E-202ENST00000377798 OR5D14Q8NGL3 314 aa12.88□□□□□ -0.35
POLR1E-202ENST00000377798 OR5H6Q8NGV6 325 aa12.88□□□□□ -0.35
POLR1E-202ENST00000377798 OR14K1Q8NGZ2 314 aa12.88□□□□□ -0.35
POLR1E-202ENST00000377798 LGALS14Q8TCE9 139 aa12.88□□□□□ -0.35
POLR1E-202ENST00000377798 STARD4Q96DR4 205 aa12.88□□□□□ -0.35
POLR1E-202ENST00000377798 ZFP3Q96NJ6 502 aa12.88□□□□□ -0.35
POLR1E-202ENST00000377798 PLEKHA1Q9HB21 404 aa12.88□□□□□ -0.35
POLR1E-202ENST00000377798 PROCRQ9UNN8 238 aa12.88□□□□□ -0.35
POLR1E-202ENST00000377798 A6NIN4 97 aa12.87□□□□□ -0.35
POLR1E-202ENST00000377798 FAM25AB3EWG3 89 aa12.87□□□□□ -0.35
POLR1E-202ENST00000377798 FAM25CB3EWG5 89 aa12.87□□□□□ -0.35
POLR1E-202ENST00000377798 FAM25GB3EWG6 89 aa12.87□□□□□ -0.35
POLR1E-202ENST00000377798 UPK1BO75841 260 aa12.87□□□□□ -0.35
POLR1E-202ENST00000377798 DHRS3O75911 302 aa12.87□□□□□ -0.35
POLR1E-202ENST00000377798 IL2RAP01589 272 aa12.87□□□□□ -0.35
POLR1E-202ENST00000377798 CALCBP10092 127 aa12.87□□□□□ -0.35
POLR1E-202ENST00000377798 DDOSTP39656 456 aa12.87□□□□□ -0.35
POLR1E-202ENST00000377798 GSG1Q2KHT4 349 aa12.87□□□□□ -0.35
POLR1E-202ENST00000377798 GLT8D1Q68CQ7 371 aa12.87□□□□□ -0.35
POLR1E-202ENST00000377798 METAP1DQ6UB28 335 aaPredicted RBP12.87□□□□□ -0.35
POLR1E-202ENST00000377798 SNX29P2Q8IUI4 249 aa12.87□□□□□ -0.35
POLR1E-202ENST00000377798 RPRMLQ8N4K4 120 aa12.87□□□□□ -0.35
POLR1E-202ENST00000377798 NKAIN3Q8N8D7 197 aa12.87□□□□□ -0.35
POLR1E-202ENST00000377798 SGK3Q96BR1 496 aa12.87□□□□□ -0.35
POLR1E-202ENST00000377798 CCDC32Q9BV29 185 aa12.87□□□□□ -0.35
POLR1E-202ENST00000377798 B3GNT2Q9NY97 397 aa12.87□□□□□ -0.35
POLR1E-202ENST00000377798 V9GYS6 101 aa12.87□□□□□ -0.35
POLR1E-202ENST00000377798 TLN1Q9Y490 2541 aaKnown RBP12.87□□□□□ -0.35
POLR1E-202ENST00000377798 LOC100509620A0A075B734 347 aa12.87□□□□□ -0.35
POLR1E-202ENST00000377798 PRRG2O14669 202 aa12.87□□□□□ -0.35
POLR1E-202ENST00000377798 MTRF1O75570 445 aaKnown RBP12.87□□□□□ -0.35
POLR1E-202ENST00000377798 RAD51DO75771 328 aa12.87□□□□□ -0.35
POLR1E-202ENST00000377798 LYZL6O75951 148 aa12.87□□□□□ -0.35
POLR1E-202ENST00000377798 CGAP01215 116 aa12.87□□□□□ -0.35
POLR1E-202ENST00000377798 APOA1P02647 267 aa12.87□□□□□ -0.35
POLR1E-202ENST00000377798 EIF4EP06730 217 aaKnown RBP12.87□□□□□ -0.35
POLR1E-202ENST00000377798 CD37P11049 281 aa12.87□□□□□ -0.35
POLR1E-202ENST00000377798 STOMP27105 288 aa12.87□□□□□ -0.35
POLR1E-202ENST00000377798 CLDN12P56749 244 aa12.87□□□□□ -0.35
POLR1E-202ENST00000377798 IFITM3Q01628 133 aa12.87□□□□□ -0.35
POLR1E-202ENST00000377798 PLP2Q04941 152 aa12.87□□□□□ -0.35
POLR1E-202ENST00000377798 PRR30Q53SZ7 412 aaPredicted RBP12.87□□□□□ -0.35
POLR1E-202ENST00000377798 ZNF529Q6P280 563 aa12.87□□□□□ -0.35
POLR1E-202ENST00000377798 GFRALQ6UXV0 394 aa12.87□□□□□ -0.35
POLR1E-202ENST00000377798 CCDC36Q8IYA8 594 aa12.87□□□□□ -0.35
POLR1E-202ENST00000377798 GABRG1Q8N1C3 465 aa12.87□□□□□ -0.35
POLR1E-202ENST00000377798 NAXEQ8NCW5 288 aa12.87□□□□□ -0.35
POLR1E-202ENST00000377798 CMTM3Q96MX0 182 aa12.87□□□□□ -0.35
POLR1E-202ENST00000377798 SDHCQ99643 169 aaPredicted RBP12.87□□□□□ -0.35
POLR1E-202ENST00000377798 SOSTQ9BQB4 213 aa12.87□□□□□ -0.35
POLR1E-202ENST00000377798 C1QTNF5Q9BXJ0 243 aa12.87□□□□□ -0.35
POLR1E-202ENST00000377798 SRRQ9GZT4 340 aa12.87□□□□□ -0.35
POLR1E-202ENST00000377798 TP63Q9H3D4 680 aaPredicted RBP12.87□□□□□ -0.35
POLR1E-202ENST00000377798 CYSLTR2Q9NS75 346 aa12.87□□□□□ -0.35
POLR1E-202ENST00000377798 ASF1BQ9NVP2 202 aa12.87□□□□□ -0.35
POLR1E-202ENST00000377798 EXTL2Q9UBQ6 330 aa12.87□□□□□ -0.35
POLR1E-202ENST00000377798 STEAP1Q9UHE8 339 aa12.87□□□□□ -0.35
POLR1E-202ENST00000377798 ZNF391Q9UJN7 358 aa12.87□□□□□ -0.35
POLR1E-202ENST00000377798 MAP1BP46821 2468 aaKnown RBP12.86□□□□□ -0.35
POLR1E-202ENST00000377798 LOC390937A0A1W2PQ73 354 aa12.86□□□□□ -0.35
POLR1E-202ENST00000377798 CIB4A0PJX0 185 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms