RNA–Protein interactions for RNA: ENST00000377107.6

USP11-204, Transcript of ubiquitin specific peptidase 11, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USP11, Length 3,515 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-204ENST00000377107 PAQR8Q8TEZ7 354 aa11.49□□□□□ -0.57
USP11-204ENST00000377107 CPNE2Q96FN4 548 aaPredicted RBP11.49□□□□□ -0.57
USP11-204ENST00000377107 PRRT1Q99946 306 aa11.49□□□□□ -0.57
USP11-204ENST00000377107 PPA2Q9H2U2 334 aa11.49□□□□□ -0.57
USP11-204ENST00000377107 KCNK7Q9Y2U2 307 aa11.49□□□□□ -0.57
USP11-204ENST00000377107 WDFY3Q8IZQ1 3526 aa11.49□□□□□ -0.57
USP11-204ENST00000377107 RAB27BO00194 218 aa11.48□□□□□ -0.57
USP11-204ENST00000377107 ADAP1O75689 374 aa11.48□□□□□ -0.57
USP11-204ENST00000377107 GABRR1P24046 479 aa11.48□□□□□ -0.57
USP11-204ENST00000377107 CDH26Q8IXH8 852 aa11.48□□□□□ -0.57
USP11-204ENST00000377107 MFSD8Q8NHS3 518 aa11.48□□□□□ -0.57
USP11-204ENST00000377107 C12orf10Q9HB07 376 aa11.48□□□□□ -0.57
USP11-204ENST00000377107 GPR27Q9NS67 375 aa11.48□□□□□ -0.57
USP11-204ENST00000377107 TNFSF12-TNFSF13A0A0A6YY99 330 aa11.48□□□□□ -0.57
USP11-204ENST00000377107 OR14I1A6ND48 311 aa11.48□□□□□ -0.57
USP11-204ENST00000377107 LIPT2A6NK58 231 aa11.48□□□□□ -0.57
USP11-204ENST00000377107 FTCDNL1E5RQL4 147 aa11.48□□□□□ -0.57
USP11-204ENST00000377107 ZFAND5O76080 213 aa11.48□□□□□ -0.57
USP11-204ENST00000377107 SERPINF1P36955 418 aa11.48□□□□□ -0.57
USP11-204ENST00000377107 CX3CR1P49238 355 aa11.48□□□□□ -0.57
USP11-204ENST00000377107 EPHA4P54764 986 aa11.48□□□□□ -0.57
USP11-204ENST00000377107 CSNK2A1P68400 391 aaPredicted RBP11.48□□□□□ -0.57
USP11-204ENST00000377107 UNC119Q13432 240 aa11.48□□□□□ -0.57
USP11-204ENST00000377107 LPAL2Q16609 132 aa11.48□□□□□ -0.57
USP11-204ENST00000377107 CSNK2A3Q8NEV1 391 aa11.48□□□□□ -0.57
USP11-204ENST00000377107 PXT1Q8NFP0 134 aa11.48□□□□□ -0.57
USP11-204ENST00000377107 KCNK17Q96T54 332 aa11.48□□□□□ -0.57
USP11-204ENST00000377107 TMEM59Q9BXS4 323 aa11.48□□□□□ -0.57
USP11-204ENST00000377107 TMEM231Q9H6L2 316 aa11.48□□□□□ -0.57
USP11-204ENST00000377107 ZNF160Q9HCG1 818 aa11.48□□□□□ -0.57
USP11-204ENST00000377107 RFPL4AA6NLU0 287 aa11.48□□□□□ -0.57
USP11-204ENST00000377107 RFPL4AL1F8VTS6 287 aa11.48□□□□□ -0.57
USP11-204ENST00000377107 AGPAT2O15120 278 aa11.48□□□□□ -0.57
USP11-204ENST00000377107 IGLV3-19P01714 112 aa11.48□□□□□ -0.57
USP11-204ENST00000377107 TMEM200AQ86VY9 491 aa11.48□□□□□ -0.57
USP11-204ENST00000377107 OR5L2Q8NGL0 311 aa11.48□□□□□ -0.57
USP11-204ENST00000377107 WDR13Q9H1Z4 485 aa11.48□□□□□ -0.57
USP11-204ENST00000377107 SRPK3Q9UPE1 567 aa11.48□□□□□ -0.57
USP11-204ENST00000377107 STMND1H3BQB6 276 aa11.47□□□□□ -0.57
USP11-204ENST00000377107 SCGB1D2O95969 90 aa11.47□□□□□ -0.57
USP11-204ENST00000377107 ITGB2P05107 769 aa11.47□□□□□ -0.57
USP11-204ENST00000377107 M6PRP20645 277 aa11.47□□□□□ -0.57
USP11-204ENST00000377107 ANOS1P23352 680 aa11.47□□□□□ -0.57
USP11-204ENST00000377107 CLDN6P56747 220 aa11.47□□□□□ -0.57
USP11-204ENST00000377107 CLVS2Q5SYC1 327 aa11.47□□□□□ -0.57
USP11-204ENST00000377107 ZNF574Q6ZN55 896 aaPredicted RBP11.47□□□□□ -0.57
USP11-204ENST00000377107 ST8SIA1Q92185 356 aa11.47□□□□□ -0.57
USP11-204ENST00000377107 ARHGAP5-AS1Q96IT6 56 aa11.47□□□□□ -0.57
USP11-204ENST00000377107 KIF25Q9UIL4 384 aa11.47□□□□□ -0.57
USP11-204ENST00000377107 C5orf63A6NC05 138 aa11.47□□□□□ -0.57
USP11-204ENST00000377107 FAHP16930 419 aa11.47□□□□□ -0.57
USP11-204ENST00000377107 AGTR1P30556 359 aa11.47□□□□□ -0.57
USP11-204ENST00000377107 SNU13P55769 128 aaKnown RBP11.47□□□□□ -0.57
USP11-204ENST00000377107 LY6G6FQ5SQ64 297 aa11.47□□□□□ -0.57
USP11-204ENST00000377107 RGS7BPQ6MZT1 257 aaPredicted RBP11.47□□□□□ -0.57
USP11-204ENST00000377107 TMPPEQ6ZT21 453 aa11.47□□□□□ -0.57
USP11-204ENST00000377107 CPEB2Q7Z5Q1 589 aaKnown RBP11.47□□□□□ -0.57
USP11-204ENST00000377107 PPP1R3BQ86XI6 285 aa11.47□□□□□ -0.57
USP11-204ENST00000377107 OR8B12Q8NGG6 310 aa11.47□□□□□ -0.57
USP11-204ENST00000377107 DOCK7Q96N67 2140 aa11.47□□□□□ -0.57
USP11-204ENST00000377107 MYOTQ9UBF9 498 aa11.47□□□□□ -0.57
USP11-204ENST00000377107 KCNMB2Q9Y691 235 aa11.47□□□□□ -0.57
USP11-204ENST00000377107 RP1L1Q8IWN7 2480 aaPredicted RBP11.47□□□□□ -0.57
USP11-204ENST00000377107 TRAV14DV4A0A0A6YYC5 116 aa11.47□□□□□ -0.57
USP11-204ENST00000377107 A0A1B0GW55 424 aa11.47□□□□□ -0.57
USP11-204ENST00000377107 PATE4P0C8F1 98 aa11.47□□□□□ -0.57
USP11-204ENST00000377107 DUX4L2P0CJ85 424 aa11.47□□□□□ -0.57
USP11-204ENST00000377107 DUX4L3P0CJ86 424 aa11.47□□□□□ -0.57
USP11-204ENST00000377107 DUX4L4P0CJ87 422 aa11.47□□□□□ -0.57
USP11-204ENST00000377107 DUX4L5P0CJ88 424 aa11.47□□□□□ -0.57
USP11-204ENST00000377107 DUX4L6P0CJ89 424 aa11.47□□□□□ -0.57
USP11-204ENST00000377107 DUX4L7P0CJ90 424 aa11.47□□□□□ -0.57
USP11-204ENST00000377107 BLVRBP30043 206 aaPredicted RBP11.47□□□□□ -0.57
USP11-204ENST00000377107 ACY1Q03154 408 aa11.47□□□□□ -0.57
USP11-204ENST00000377107 MEF2DQ14814 521 aa11.47□□□□□ -0.57
USP11-204ENST00000377107 OGFOD3Q6PK18 319 aa11.47□□□□□ -0.57
USP11-204ENST00000377107 BRICD5Q6PL45 260 aa11.47□□□□□ -0.57
USP11-204ENST00000377107 OR10R2Q8NGX6 335 aa11.47□□□□□ -0.57
USP11-204ENST00000377107 RNF133Q8WVZ7 376 aa11.47□□□□□ -0.57
USP11-204ENST00000377107 UBE2ZQ9H832 354 aaPredicted RBP11.47□□□□□ -0.57
USP11-204ENST00000377107 OCIAD1Q9NX40 245 aa11.47□□□□□ -0.57
USP11-204ENST00000377107 SLC39A1Q9NY26 324 aa11.47□□□□□ -0.57
USP11-204ENST00000377107 PLEK2Q9NYT0 353 aa11.47□□□□□ -0.57
USP11-204ENST00000377107 ZNF319Q9P2F9 582 aa11.47□□□□□ -0.57
USP11-204ENST00000377107 DUX4Q9UBX2 424 aa11.47□□□□□ -0.57
USP11-204ENST00000377107 PTRH2Q9Y3E5 179 aaKnown RBP11.47□□□□□ -0.57
USP11-204ENST00000377107 CSAG2Q9Y5P2 127 aa11.47□□□□□ -0.57
USP11-204ENST00000377107 FER1L5A0AVI2 2057 aa11.46□□□□□ -0.57
USP11-204ENST00000377107 LOC105371267A0A1B0GV96 52 aa11.46□□□□□ -0.57
USP11-204ENST00000377107 FAM221AA4D161 298 aa11.46□□□□□ -0.57
USP11-204ENST00000377107 OR5H15A6NDH6 313 aa11.46□□□□□ -0.57
USP11-204ENST00000377107 DBHP09172 617 aa11.46□□□□□ -0.57
USP11-204ENST00000377107 FCGR2AP12318 317 aa11.46□□□□□ -0.57
USP11-204ENST00000377107 GLULP15104 373 aa11.46□□□□□ -0.57
USP11-204ENST00000377107 CXCL12P48061 93 aa11.46□□□□□ -0.57
USP11-204ENST00000377107 PDCD1Q15116 288 aa11.46□□□□□ -0.57
USP11-204ENST00000377107 ATRAIDQ6UW56 229 aa11.46□□□□□ -0.57
USP11-204ENST00000377107 TDHQ8IZJ6 230 aa11.46□□□□□ -0.57
USP11-204ENST00000377107 NKAIN3Q8N8D7 197 aa11.46□□□□□ -0.57
USP11-204ENST00000377107 OR5H2Q8NGV7 314 aa11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms