RNA–Protein interactions for RNA: ENST00000377047.8

GPC6-201, Transcript of glypican 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPC6, Length 6,467 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC6-201ENST00000377047 OPCMLQ14982 345 aa12.29□□□□□ -0.44
GPC6-201ENST00000377047 LRRC10Q5BKY1 277 aa12.29□□□□□ -0.44
GPC6-201ENST00000377047 CMTM4Q8IZR5 234 aa12.29□□□□□ -0.44
GPC6-201ENST00000377047 LINC01555Q8NAE3 123 aa12.29□□□□□ -0.44
GPC6-201ENST00000377047 APOBEC3DQ96AK3 386 aaPredicted RBP12.29□□□□□ -0.44
GPC6-201ENST00000377047 RNF167Q9H6Y7 350 aa12.29□□□□□ -0.44
GPC6-201ENST00000377047 TMEM235A6NFC5 223 aa12.29□□□□□ -0.44
GPC6-201ENST00000377047 ALG1L2C9J202 215 aa12.29□□□□□ -0.44
GPC6-201ENST00000377047 GALR2O43603 387 aaPredicted RBP12.29□□□□□ -0.44
GPC6-201ENST00000377047 SULT1C4O75897 302 aa12.29□□□□□ -0.44
GPC6-201ENST00000377047 CTU2Q2VPK5 515 aaKnown RBP12.29□□□□□ -0.44
GPC6-201ENST00000377047 ZNF793Q6ZN11 406 aa12.29□□□□□ -0.44
GPC6-201ENST00000377047 JAM3Q9BX67 310 aa12.29□□□□□ -0.44
GPC6-201ENST00000377047 FLVCR1Q9Y5Y0 555 aa12.29□□□□□ -0.44
GPC6-201ENST00000377047 NDUFB3O43676 98 aa12.28□□□□□ -0.44
GPC6-201ENST00000377047 TFAP2AP05549 437 aa12.28□□□□□ -0.44
GPC6-201ENST00000377047 CRYBA1P05813 215 aa12.28□□□□□ -0.44
GPC6-201ENST00000377047 HNRNPFP52597 415 aaKnown RBP12.28□□□□□ -0.44
GPC6-201ENST00000377047 OR52I2Q8NH67 350 aa12.28□□□□□ -0.44
GPC6-201ENST00000377047 ITPKCQ96DU7 683 aa12.28□□□□□ -0.44
GPC6-201ENST00000377047 RNF32Q9H0A6 362 aa12.28□□□□□ -0.44
GPC6-201ENST00000377047 ARAP2Q8WZ64 1704 aa12.28□□□□□ -0.44
GPC6-201ENST00000377047 GPR37O15354 613 aa12.28□□□□□ -0.44
GPC6-201ENST00000377047 ISL1P61371 349 aa12.28□□□□□ -0.44
GPC6-201ENST00000377047 YBX1P67809 324 aaKnown RBP12.28□□□□□ -0.44
GPC6-201ENST00000377047 AQP6Q13520 282 aa12.28□□□□□ -0.44
GPC6-201ENST00000377047 FYTTD1Q96QD9 318 aaKnown RBP12.28□□□□□ -0.44
GPC6-201ENST00000377047 TXN2Q99757 166 aa12.28□□□□□ -0.44
GPC6-201ENST00000377047 ADAT1Q9BUB4 502 aaKnown RBP12.28□□□□□ -0.44
GPC6-201ENST00000377047 COLQQ9Y215 455 aaPredicted RBP12.28□□□□□ -0.44
GPC6-201ENST00000377047 ST3GAL6Q9Y274 331 aa12.28□□□□□ -0.44
GPC6-201ENST00000377047 SBK3P0C264 359 aa12.28□□□□□ -0.44
GPC6-201ENST00000377047 OR1F12Q8NHA8 337 aa12.28□□□□□ -0.44
GPC6-201ENST00000377047 OCIAD1Q9NX40 245 aa12.28□□□□□ -0.44
GPC6-201ENST00000377047 RNF150Q9ULK6 438 aa12.28□□□□□ -0.44
GPC6-201ENST00000377047 A4GNTQ9UNA3 340 aa12.28□□□□□ -0.44
GPC6-201ENST00000377047 RREB1Q92766 1687 aa12.28□□□□□ -0.44
GPC6-201ENST00000377047 DFFBO76075 338 aa12.28□□□□□ -0.44
GPC6-201ENST00000377047 TNFRSF1AP19438 455 aa12.28□□□□□ -0.44
GPC6-201ENST00000377047 RFX2P48378 723 aa12.28□□□□□ -0.44
GPC6-201ENST00000377047 ZNF85Q03923 595 aa12.28□□□□□ -0.44
GPC6-201ENST00000377047 TMEM211Q6ICI0 200 aa12.28□□□□□ -0.44
GPC6-201ENST00000377047 BCORQ6W2J9 1755 aa12.28□□□□□ -0.44
GPC6-201ENST00000377047 FAHP16930 419 aa12.28□□□□□ -0.44
GPC6-201ENST00000377047 LHX9Q9NQ69 397 aa12.28□□□□□ -0.44
GPC6-201ENST00000377047 CRYZL1O95825 349 aa12.27□□□□□ -0.44
GPC6-201ENST00000377047 CASP3P42574 277 aa12.27□□□□□ -0.44
GPC6-201ENST00000377047 FZD5Q13467 585 aa12.27□□□□□ -0.44
GPC6-201ENST00000377047 TTC3P53804 2025 aa12.27□□□□□ -0.44
GPC6-201ENST00000377047 FABP7O15540 132 aa12.27□□□□□ -0.44
GPC6-201ENST00000377047 PSMB3P49720 205 aa12.27□□□□□ -0.44
GPC6-201ENST00000377047 UBE2G2P60604 165 aa12.27□□□□□ -0.44
GPC6-201ENST00000377047 FCN2Q15485 313 aa12.27□□□□□ -0.44
GPC6-201ENST00000377047 BATFQ16520 125 aa12.27□□□□□ -0.44
GPC6-201ENST00000377047 TMEM104Q8NE00 496 aa12.27□□□□□ -0.44
GPC6-201ENST00000377047 ALG14Q96F25 216 aa12.27□□□□□ -0.44
GPC6-201ENST00000377047 COMMD5Q9GZQ3 224 aa12.27□□□□□ -0.44
GPC6-201ENST00000377047 SMLR1H3BR10 107 aa12.27□□□□□ -0.45
GPC6-201ENST00000377047 ARPC3O15145 178 aa12.27□□□□□ -0.45
GPC6-201ENST00000377047 TRAF3IP2O43734 574 aaPredicted RBP12.27□□□□□ -0.45
GPC6-201ENST00000377047 HPNP05981 417 aa12.27□□□□□ -0.45
GPC6-201ENST00000377047 CSN1S1P47710 185 aa12.27□□□□□ -0.45
GPC6-201ENST00000377047 MNX1P50219 401 aaPredicted RBP12.27□□□□□ -0.45
GPC6-201ENST00000377047 PCBP4P57723 403 aaKnown RBP12.27□□□□□ -0.45
GPC6-201ENST00000377047 C2orf76Q3KRA6 126 aa12.27□□□□□ -0.45
GPC6-201ENST00000377047 C16orf47Q6ZP98 133 aaPredicted RBP12.27□□□□□ -0.45
GPC6-201ENST00000377047 MOB3BQ86TA1 216 aa12.27□□□□□ -0.45
GPC6-201ENST00000377047 SYS1Q8N2H4 156 aa12.27□□□□□ -0.45
GPC6-201ENST00000377047 OSR2Q8N2R0 312 aa12.27□□□□□ -0.45
GPC6-201ENST00000377047 ISG20L2Q9H9L3 353 aaKnown RBP12.27□□□□□ -0.45
GPC6-201ENST00000377047 SMCO4Q9NRQ5 59 aa12.27□□□□□ -0.45
GPC6-201ENST00000377047 LIN7CQ9NUP9 197 aaKnown RBP12.27□□□□□ -0.45
GPC6-201ENST00000377047 TRGV10A0A0A0MS01 117 aa12.27□□□□□ -0.45
GPC6-201ENST00000377047 TCRBV5S2A0A599 114 aa12.27□□□□□ -0.45
GPC6-201ENST00000377047 TMEM200CA6NKL6 621 aa12.27□□□□□ -0.45
GPC6-201ENST00000377047 PPIHO43447 177 aaKnown RBP12.27□□□□□ -0.45
GPC6-201ENST00000377047 RAE1P78406 368 aaKnown RBP12.27□□□□□ -0.45
GPC6-201ENST00000377047 ERHP84090 104 aaKnown RBP12.27□□□□□ -0.45
GPC6-201ENST00000377047 TCTN1Q2MV58 587 aa12.27□□□□□ -0.45
GPC6-201ENST00000377047 SPANXN5Q5MJ07 72 aa12.27□□□□□ -0.45
GPC6-201ENST00000377047 RHOUQ7L0Q8 258 aa12.27□□□□□ -0.45
GPC6-201ENST00000377047 CELF2-AS1Q8N7Q2 184 aa12.27□□□□□ -0.45
GPC6-201ENST00000377047 SMIM19Q96E16 107 aa12.27□□□□□ -0.45
GPC6-201ENST00000377047 PLA2G12AQ9BZM1 189 aa12.27□□□□□ -0.45
GPC6-201ENST00000377047 SCPEP1Q9HB40 452 aa12.27□□□□□ -0.45
GPC6-201ENST00000377047 ZNF391Q9UJN7 358 aa12.27□□□□□ -0.45
GPC6-201ENST00000377047 HSPB2A8KAH6 182 aa12.27□□□□□ -0.45
GPC6-201ENST00000377047 CNR1P21554 472 aa12.27□□□□□ -0.45
GPC6-201ENST00000377047 OR10A3P58181 314 aa12.27□□□□□ -0.45
GPC6-201ENST00000377047 HSPB2Q16082 182 aa12.27□□□□□ -0.45
GPC6-201ENST00000377047 AMER3Q8N944 861 aa12.27□□□□□ -0.45
GPC6-201ENST00000377047 IGLV3-16A0A075B6K0 115 aa12.26□□□□□ -0.45
GPC6-201ENST00000377047 NCBP2LA6PVI3 153 aaKnown RBP12.26□□□□□ -0.45
GPC6-201ENST00000377047 RPL35P42766 123 aaKnown RBP12.26□□□□□ -0.45
GPC6-201ENST00000377047 FUT6P51993 359 aa12.26□□□□□ -0.45
GPC6-201ENST00000377047 SPINK14Q6IE38 97 aa12.26□□□□□ -0.45
GPC6-201ENST00000377047 BHLHA9Q7RTU4 235 aa12.26□□□□□ -0.45
GPC6-201ENST00000377047 SLC30A7Q8NEW0 376 aa12.26□□□□□ -0.45
GPC6-201ENST00000377047 CORO2AQ92828 525 aa12.26□□□□□ -0.45
GPC6-201ENST00000377047 ESRP2Q9H6T0 727 aaKnown RBP12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 84.3 ms