RNA–Protein interactions for RNA: ENST00000376643.6

HDAC6-204, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 907 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-204ENST00000376643 MMADHCQ9H3L0 296 aaPredicted RBP12.32□□□□□ -0.44
HDAC6-204ENST00000376643 WDR76Q9H967 626 aa12.32□□□□□ -0.44
HDAC6-204ENST00000376643 IL1RAPQ9NPH3 570 aa12.32□□□□□ -0.44
HDAC6-204ENST00000376643 C14orf119Q9NWQ9 140 aa12.32□□□□□ -0.44
HDAC6-204ENST00000376643 CD300AQ9UGN4 299 aa12.32□□□□□ -0.44
HDAC6-204ENST00000376643 BAIAP2Q9UQB8 552 aa12.32□□□□□ -0.44
HDAC6-204ENST00000376643 MMP24Q9Y5R2 645 aa12.32□□□□□ -0.44
HDAC6-204ENST00000376643 CDH10Q9Y6N8 788 aa12.32□□□□□ -0.44
HDAC6-204ENST00000376643 V9GYQ6 96 aa12.32□□□□□ -0.44
HDAC6-204ENST00000376643 TENM1Q9UKZ4 2725 aa12.31□□□□□ -0.44
HDAC6-204ENST00000376643 CD300LBA8K4G0 201 aa12.31□□□□□ -0.44
HDAC6-204ENST00000376643 LGALS8O00214 317 aa12.31□□□□□ -0.44
HDAC6-204ENST00000376643 XRCC2O43543 280 aa12.31□□□□□ -0.44
HDAC6-204ENST00000376643 FAM20BO75063 409 aa12.31□□□□□ -0.44
HDAC6-204ENST00000376643 ZNF205O95201 554 aa12.31□□□□□ -0.44
HDAC6-204ENST00000376643 GPANK1O95872 356 aa12.31□□□□□ -0.44
HDAC6-204ENST00000376643 APOC1P02654 83 aa12.31□□□□□ -0.44
HDAC6-204ENST00000376643 SEMG1P04279 462 aa12.31□□□□□ -0.44
HDAC6-204ENST00000376643 HLA-DPB1P04440 258 aa12.31□□□□□ -0.44
HDAC6-204ENST00000376643 IGHV4-38-2P0DP08 117 aa12.31□□□□□ -0.44
HDAC6-204ENST00000376643 GRK5P34947 590 aa12.31□□□□□ -0.44
HDAC6-204ENST00000376643 PSMB10P40306 273 aa12.31□□□□□ -0.44
HDAC6-204ENST00000376643 SLC15A1P46059 708 aa12.31□□□□□ -0.44
HDAC6-204ENST00000376643 MAB21L1Q13394 359 aa12.31□□□□□ -0.44
HDAC6-204ENST00000376643 TAF13Q15543 124 aa12.31□□□□□ -0.44
HDAC6-204ENST00000376643 C16orf89Q6UX73 402 aa12.31□□□□□ -0.44
HDAC6-204ENST00000376643 FITM2Q8N6M3 262 aa12.31□□□□□ -0.44
HDAC6-204ENST00000376643 OR10S1Q8NGN2 331 aa12.31□□□□□ -0.44
HDAC6-204ENST00000376643 OR4F5Q8NH21 305 aa12.31□□□□□ -0.44
HDAC6-204ENST00000376643 DACT3Q96B18 629 aaPredicted RBP12.31□□□□□ -0.44
HDAC6-204ENST00000376643 ZNF48Q96MX3 618 aaPredicted RBP12.31□□□□□ -0.44
HDAC6-204ENST00000376643 TECTBQ96PL2 329 aa12.31□□□□□ -0.44
HDAC6-204ENST00000376643 ELAC2Q9BQ52 826 aaKnown RBP12.31□□□□□ -0.44
HDAC6-204ENST00000376643 COPS4Q9BT78 406 aa12.31□□□□□ -0.44
HDAC6-204ENST00000376643 PRDM13Q9H4Q3 707 aa12.31□□□□□ -0.44
HDAC6-204ENST00000376643 ARHGAP32A7KAX9 2087 aa12.31□□□□□ -0.44
HDAC6-204ENST00000376643 MGAM2Q2M2H8 2515 aa12.3□□□□□ -0.44
HDAC6-204ENST00000376643 OR6C68A6NDL8 312 aa12.3□□□□□ -0.44
HDAC6-204ENST00000376643 SRRM5B3KS81 715 aa12.3□□□□□ -0.44
HDAC6-204ENST00000376643 PTBP3O95758 552 aaKnown RBP12.3□□□□□ -0.44
HDAC6-204ENST00000376643 ECDO95905 644 aaPredicted RBP12.3□□□□□ -0.44
HDAC6-204ENST00000376643 CFL1P23528 166 aaKnown RBP12.3□□□□□ -0.44
HDAC6-204ENST00000376643 MNAT1P51948 309 aa12.3□□□□□ -0.44
HDAC6-204ENST00000376643 FGF12P61328 243 aa12.3□□□□□ -0.44
HDAC6-204ENST00000376643 PDCD1Q15116 288 aa12.3□□□□□ -0.44
HDAC6-204ENST00000376643 OR8B8Q15620 311 aa12.3□□□□□ -0.44
HDAC6-204ENST00000376643 METTL11BQ5VVY1 283 aa12.3□□□□□ -0.44
HDAC6-204ENST00000376643 SPATC1Q76KD6 591 aa12.3□□□□□ -0.44
HDAC6-204ENST00000376643 ZDHHC21Q8IVQ6 265 aa12.3□□□□□ -0.44
HDAC6-204ENST00000376643 FTMTQ8N4E7 242 aa12.3□□□□□ -0.44
HDAC6-204ENST00000376643 RNF148Q8N7C7 305 aa12.3□□□□□ -0.44
HDAC6-204ENST00000376643 FAM86B1Q8N7N1 296 aa12.3□□□□□ -0.44
HDAC6-204ENST00000376643 GATAD2BQ8WXI9 593 aa12.3□□□□□ -0.44
HDAC6-204ENST00000376643 C1orf147Q96MC9 270 aaPredicted RBP12.3□□□□□ -0.44
HDAC6-204ENST00000376643 TRIM15Q9C019 465 aa12.3□□□□□ -0.44
HDAC6-204ENST00000376643 BEX1Q9HBH7 125 aa12.3□□□□□ -0.44
HDAC6-204ENST00000376643 PNRC2Q9NPJ4 139 aaKnown RBP12.3□□□□□ -0.44
HDAC6-204ENST00000376643 POMT1Q9Y6A1 747 aa12.3□□□□□ -0.44
HDAC6-204ENST00000376643 OOEPA6NGQ2 149 aa12.29□□□□□ -0.44
HDAC6-204ENST00000376643 ANKRD30BLA7E2S9 258 aa12.29□□□□□ -0.44
HDAC6-204ENST00000376643 ARPC2O15144 300 aa12.29□□□□□ -0.44
HDAC6-204ENST00000376643 IFNGP01579 166 aa12.29□□□□□ -0.44
HDAC6-204ENST00000376643 CA6P23280 308 aa12.29□□□□□ -0.44
HDAC6-204ENST00000376643 FMO3P31513 532 aa12.29□□□□□ -0.44
HDAC6-204ENST00000376643 OTX1P32242 354 aaPredicted RBP12.29□□□□□ -0.44
HDAC6-204ENST00000376643 GRB2P62993 217 aaKnown RBP12.29□□□□□ -0.44
HDAC6-204ENST00000376643 RSPO1Q2MKA7 263 aaPredicted RBP12.29□□□□□ -0.44
HDAC6-204ENST00000376643 CLEC12AQ5QGZ9 265 aa12.29□□□□□ -0.44
HDAC6-204ENST00000376643 PGBD2Q6P3X8 592 aa12.29□□□□□ -0.44
HDAC6-204ENST00000376643 C17orf107Q6ZR85 190 aa12.29□□□□□ -0.44
HDAC6-204ENST00000376643 CPLX4Q7Z7G2 160 aa12.29□□□□□ -0.44
HDAC6-204ENST00000376643 TMIGD2Q96BF3 282 aa12.29□□□□□ -0.44
HDAC6-204ENST00000376643 DMRTB1Q96MA1 342 aa12.29□□□□□ -0.44
HDAC6-204ENST00000376643 KCNJ15Q99712 375 aa12.29□□□□□ -0.44
HDAC6-204ENST00000376643 TOR3AQ9H497 397 aa12.29□□□□□ -0.44
HDAC6-204ENST00000376643 UFSP2Q9NUQ7 469 aa12.29□□□□□ -0.44
HDAC6-204ENST00000376643 ZNF446Q9NWS9 450 aa12.29□□□□□ -0.44
HDAC6-204ENST00000376643 IL20Q9NYY1 176 aa12.29□□□□□ -0.44
HDAC6-204ENST00000376643 IGHV3OR16-10A0A075B7F0 116 aa12.28□□□□□ -0.44
HDAC6-204ENST00000376643 IGHV3-64DA0A0J9YX35 117 aa12.28□□□□□ -0.44
HDAC6-204ENST00000376643 A6NLC8 198 aa12.28□□□□□ -0.44
HDAC6-204ENST00000376643 ZNF879B4DU55 563 aa12.28□□□□□ -0.44
HDAC6-204ENST00000376643 ZNF878C9JN71 531 aa12.28□□□□□ -0.44
HDAC6-204ENST00000376643 BHLHE40O14503 412 aa12.28□□□□□ -0.44
HDAC6-204ENST00000376643 HOXA3O43365 443 aaPredicted RBP12.28□□□□□ -0.44
HDAC6-204ENST00000376643 ADAM20O43506 726 aa12.28□□□□□ -0.44
HDAC6-204ENST00000376643 TIPRLO75663 272 aa12.28□□□□□ -0.44
HDAC6-204ENST00000376643 TOX4O94842 621 aa12.28□□□□□ -0.44
HDAC6-204ENST00000376643 KNG1P01042 644 aa12.28□□□□□ -0.44
HDAC6-204ENST00000376643 PMELP40967 661 aa12.28□□□□□ -0.44
HDAC6-204ENST00000376643 ENTPD1P49961 510 aa12.28□□□□□ -0.44
HDAC6-204ENST00000376643 HMGA2P52926 109 aa12.28□□□□□ -0.44
HDAC6-204ENST00000376643 SLC35F1Q5T1Q4 408 aa12.28□□□□□ -0.44
HDAC6-204ENST00000376643 PRAMEF6Q5VXH4 476 aa12.28□□□□□ -0.44
HDAC6-204ENST00000376643 TREML4Q6UXN2 200 aa12.28□□□□□ -0.44
HDAC6-204ENST00000376643 RASSF6Q6ZTQ3 369 aa12.28□□□□□ -0.44
HDAC6-204ENST00000376643 OR8S1Q8NH09 359 aa12.28□□□□□ -0.44
HDAC6-204ENST00000376643 TBC1D15Q8TC07 691 aa12.28□□□□□ -0.44
HDAC6-204ENST00000376643 SSMEM1Q8WWF3 244 aa12.28□□□□□ -0.44
HDAC6-204ENST00000376643 MAP6Q96JE9 813 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms