RNA–Protein interactions for RNA: ENST00000375851.6

C9orf47-203, Transcript of chromosome 9 open reading frame 47, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene C9orf47, Length 4,837 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf47-203ENST00000375851 ATF1P18846 271 aa12.26□□□□□ -0.45
C9orf47-203ENST00000375851 PI3P19957 117 aa12.26□□□□□ -0.45
C9orf47-203ENST00000375851 CDKN2AP42771 156 aaKnown RBP12.26□□□□□ -0.45
C9orf47-203ENST00000375851 SRSF5Q13243 272 aaKnown RBP12.26□□□□□ -0.45
C9orf47-203ENST00000375851 LHFPL2Q6ZUX7 228 aa12.26□□□□□ -0.45
C9orf47-203ENST00000375851 SVBPQ8N300 66 aa12.26□□□□□ -0.45
C9orf47-203ENST00000375851 PLPP5Q8NEB5 264 aa12.26□□□□□ -0.45
C9orf47-203ENST00000375851 OR4D9Q8NGE8 314 aa12.26□□□□□ -0.45
C9orf47-203ENST00000375851 KCNJ15Q99712 375 aa12.26□□□□□ -0.45
C9orf47-203ENST00000375851 DECR2Q9NUI1 292 aa12.26□□□□□ -0.45
C9orf47-203ENST00000375851 C4orf47A7E2U8 309 aa12.26□□□□□ -0.45
C9orf47-203ENST00000375851 HSD17B6O14756 317 aa12.26□□□□□ -0.45
C9orf47-203ENST00000375851 LALBAP00709 142 aa12.26□□□□□ -0.45
C9orf47-203ENST00000375851 FAM157BP0CG42 384 aa12.26□□□□□ -0.45
C9orf47-203ENST00000375851 CLDN20P56880 219 aa12.26□□□□□ -0.45
C9orf47-203ENST00000375851 MRPS34P82930 218 aaKnown RBP12.26□□□□□ -0.45
C9orf47-203ENST00000375851 INSL4Q14641 139 aa12.26□□□□□ -0.45
C9orf47-203ENST00000375851 BTLAQ7Z6A9 289 aa12.26□□□□□ -0.45
C9orf47-203ENST00000375851 APH1BQ8WW43 257 aa12.26□□□□□ -0.45
C9orf47-203ENST00000375851 FOXB1Q99853 325 aa12.26□□□□□ -0.45
C9orf47-203ENST00000375851 GSX2Q9BZM3 304 aa12.26□□□□□ -0.45
C9orf47-203ENST00000375851 RBM38Q9H0Z9 239 aaKnown RBP12.26□□□□□ -0.45
C9orf47-203ENST00000375851 BIN3Q9NQY0 253 aa12.26□□□□□ -0.45
C9orf47-203ENST00000375851 ZNF638Q14966 1978 aaKnown RBP12.26□□□□□ -0.45
C9orf47-203ENST00000375851 CEP250Q9BV73 2442 aa12.25□□□□□ -0.45
C9orf47-203ENST00000375851 RGS11O94810 467 aa12.25□□□□□ -0.45
C9orf47-203ENST00000375851 CRYAAP02489 173 aa12.25□□□□□ -0.45
C9orf47-203ENST00000375851 MSL3P1P0C860 447 aa12.25□□□□□ -0.45
C9orf47-203ENST00000375851 OR11G2Q8NGC1 345 aa12.25□□□□□ -0.45
C9orf47-203ENST00000375851 OR4D11Q8NGI4 311 aa12.25□□□□□ -0.45
C9orf47-203ENST00000375851 H1FXQ92522 213 aaKnown RBP12.25□□□□□ -0.45
C9orf47-203ENST00000375851 MOGAT1Q96PD6 335 aa12.25□□□□□ -0.45
C9orf47-203ENST00000375851 SSX3Q99909 188 aa12.25□□□□□ -0.45
C9orf47-203ENST00000375851 PLA2G3Q9NZ20 509 aa12.25□□□□□ -0.45
C9orf47-203ENST00000375851 ATAD5Q96QE3 1844 aa12.25□□□□□ -0.45
C9orf47-203ENST00000375851 SLC22A20A6NK97 555 aa12.25□□□□□ -0.45
C9orf47-203ENST00000375851 ST8SIA3O43173 380 aa12.25□□□□□ -0.45
C9orf47-203ENST00000375851 TNFSF14O43557 240 aa12.25□□□□□ -0.45
C9orf47-203ENST00000375851 MGMTP16455 207 aa12.25□□□□□ -0.45
C9orf47-203ENST00000375851 PTAFRP25105 342 aa12.25□□□□□ -0.45
C9orf47-203ENST00000375851 INSM1Q01101 510 aaPredicted RBP12.25□□□□□ -0.45
C9orf47-203ENST00000375851 WDR38Q5JTN6 314 aa12.25□□□□□ -0.45
C9orf47-203ENST00000375851 ANKRD16Q6P6B7 361 aa12.25□□□□□ -0.45
C9orf47-203ENST00000375851 OR4A16Q8NH70 328 aa12.25□□□□□ -0.45
C9orf47-203ENST00000375851 MFRPQ9BY79 579 aa12.25□□□□□ -0.45
C9orf47-203ENST00000375851 MTCH2Q9Y6C9 303 aa12.25□□□□□ -0.45
C9orf47-203ENST00000375851 KRBOX1C9JBD0 128 aa12.25□□□□□ -0.45
C9orf47-203ENST00000375851 BHLHE40O14503 412 aa12.25□□□□□ -0.45
C9orf47-203ENST00000375851 XRCC3O43542 346 aa12.25□□□□□ -0.45
C9orf47-203ENST00000375851 TMEM127O75204 238 aa12.25□□□□□ -0.45
C9orf47-203ENST00000375851 MT-CO3P00414 261 aa12.25□□□□□ -0.45
C9orf47-203ENST00000375851 SELEP16581 610 aa12.25□□□□□ -0.45
C9orf47-203ENST00000375851 NFYBP25208 207 aa12.25□□□□□ -0.45
C9orf47-203ENST00000375851 BTN1A1Q13410 526 aa12.25□□□□□ -0.45
C9orf47-203ENST00000375851 ZNF266Q14584 549 aa12.25□□□□□ -0.45
C9orf47-203ENST00000375851 SLC16A12Q6ZSM3 486 aa12.25□□□□□ -0.45
C9orf47-203ENST00000375851 ZNF573Q86YE8 665 aa12.25□□□□□ -0.45
C9orf47-203ENST00000375851 C1orf210Q8IVY1 113 aa12.25□□□□□ -0.45
C9orf47-203ENST00000375851 VSTM2LQ96N03 204 aa12.25□□□□□ -0.45
C9orf47-203ENST00000375851 PLEKHB1Q9UF11 243 aaPredicted RBP12.25□□□□□ -0.45
C9orf47-203ENST00000375851 PROCRQ9UNN8 238 aa12.25□□□□□ -0.45
C9orf47-203ENST00000375851 KIR2DL3P43628 341 aa12.25□□□□□ -0.45
C9orf47-203ENST00000375851 EIF3IQ13347 325 aaKnown RBP12.25□□□□□ -0.45
C9orf47-203ENST00000375851 ACER2Q5QJU3 275 aa12.25□□□□□ -0.45
C9orf47-203ENST00000375851 TMUB2Q71RG4 321 aa12.25□□□□□ -0.45
C9orf47-203ENST00000375851 LSRQ86X29 649 aaPredicted RBP12.25□□□□□ -0.45
C9orf47-203ENST00000375851 OR10R2Q8NGX6 335 aa12.25□□□□□ -0.45
C9orf47-203ENST00000375851 FRZBQ92765 325 aa12.25□□□□□ -0.45
C9orf47-203ENST00000375851 HAS2Q92819 552 aa12.25□□□□□ -0.45
C9orf47-203ENST00000375851 ADGRL4Q9HBW9 690 aa12.25□□□□□ -0.45
C9orf47-203ENST00000375851 FLVCR1Q9Y5Y0 555 aa12.25□□□□□ -0.45
C9orf47-203ENST00000375851 LRRC30A6NM36 301 aa12.24□□□□□ -0.45
C9orf47-203ENST00000375851 CNR1P21554 472 aa12.24□□□□□ -0.45
C9orf47-203ENST00000375851 HRH1P35367 487 aa12.24□□□□□ -0.45
C9orf47-203ENST00000375851 NOVA1P51513 510 aaKnown RBP12.24□□□□□ -0.45
C9orf47-203ENST00000375851 OR1C1Q15619 314 aa12.24□□□□□ -0.45
C9orf47-203ENST00000375851 GLCCI1Q86VQ1 547 aa12.24□□□□□ -0.45
C9orf47-203ENST00000375851 MALSU1Q96EH3 234 aa12.24□□□□□ -0.45
C9orf47-203ENST00000375851 C4orf45Q96LM5 186 aa12.24□□□□□ -0.45
C9orf47-203ENST00000375851 FAM173AQ9BQD7 235 aa12.24□□□□□ -0.45
C9orf47-203ENST00000375851 SMOC1Q9H4F8 434 aa12.24□□□□□ -0.45
C9orf47-203ENST00000375851 HEYLQ9NQ87 328 aaPredicted RBP12.24□□□□□ -0.45
C9orf47-203ENST00000375851 ZNFX1Q9P2E3 1918 aaKnown RBP12.24□□□□□ -0.45
C9orf47-203ENST00000375851 FIGNL2A6NMB9 653 aa12.24□□□□□ -0.45
C9orf47-203ENST00000375851 CYR61O00622 381 aa12.24□□□□□ -0.45
C9orf47-203ENST00000375851 ENSAO43768 121 aaKnown RBP12.24□□□□□ -0.45
C9orf47-203ENST00000375851 GPANK1O95872 356 aa12.24□□□□□ -0.45
C9orf47-203ENST00000375851 KANSL1Q7Z3B3 1105 aa12.24□□□□□ -0.45
C9orf47-203ENST00000375851 PXT1Q8NFP0 134 aa12.24□□□□□ -0.45
C9orf47-203ENST00000375851 EDARQ9UNE0 448 aa12.24□□□□□ -0.45
C9orf47-203ENST00000375851 NXPH3O95157 252 aa12.24□□□□□ -0.45
C9orf47-203ENST00000375851 GLAP06280 429 aa12.24□□□□□ -0.45
C9orf47-203ENST00000375851 OR5H8P0DN80 308 aa12.24□□□□□ -0.45
C9orf47-203ENST00000375851 PCMT1P22061 227 aa12.24□□□□□ -0.45
C9orf47-203ENST00000375851 MMP15P51511 669 aa12.24□□□□□ -0.45
C9orf47-203ENST00000375851 RPS23P62266 143 aaKnown RBP12.24□□□□□ -0.45
C9orf47-203ENST00000375851 MAMSTRQ6ZN01 415 aa12.24□□□□□ -0.45
C9orf47-203ENST00000375851 OR4C16Q8NGL9 310 aa12.24□□□□□ -0.45
C9orf47-203ENST00000375851 PFDN5Q99471 154 aa12.24□□□□□ -0.45
C9orf47-203ENST00000375851 GHRLQ9UBU3 117 aa12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms